RNA–Protein interactions for RNA: ENST00000411884.2

CLHC1-205, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 4

Gene CLHC1, Length 549 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-205ENST00000411884 MFSD10Q14728 455 aa9.8□□□□□ -0.84
CLHC1-205ENST00000411884 WDR70Q9NW82 654 aa9.8□□□□□ -0.84
CLHC1-205ENST00000411884 GPHNQ9NQX3 736 aaPredicted RBP9.79□□□□□ -0.84
CLHC1-205ENST00000411884 TMEM92Q6UXU6 159 aa9.76□□□□□ -0.85
CLHC1-205ENST00000411884 KIF3CO14782 793 aa9.75□□□□□ -0.85
CLHC1-205ENST00000411884 DDX27Q96GQ7 796 aaKnown RBP9.75□□□□□ -0.85
CLHC1-205ENST00000411884 POTEB2H3BUK9 544 aa9.74□□□□□ -0.85
CLHC1-205ENST00000411884 POTEJP0CG39 1038 aa9.74□□□□□ -0.85
CLHC1-205ENST00000411884 TMC2Q8TDI7 906 aa9.74□□□□□ -0.85
CLHC1-205ENST00000411884 KCNV2Q8TDN2 545 aa9.74□□□□□ -0.85
CLHC1-205ENST00000411884 C2orf72A6NCS6 295 aa9.73□□□□□ -0.85
CLHC1-205ENST00000411884 DSG2Q14126 1118 aa9.72□□□□□ -0.85
CLHC1-205ENST00000411884 E2F4Q16254 413 aa9.72□□□□□ -0.85
CLHC1-205ENST00000411884 BCANQ96GW7 911 aa9.72□□□□□ -0.85
CLHC1-205ENST00000411884 FOXK1P85037 733 aa9.71□□□□□ -0.86
CLHC1-205ENST00000411884 PPP1R15BQ5SWA1 713 aa9.71□□□□□ -0.86
CLHC1-205ENST00000411884 P3H3Q8IVL6 736 aa9.71□□□□□ -0.86
CLHC1-205ENST00000411884 CAMK2BQ13554 666 aa9.7□□□□□ -0.86
CLHC1-205ENST00000411884 C3orf67Q6ZVT6 689 aa9.7□□□□□ -0.86
CLHC1-205ENST00000411884 PLPP6Q8IY26 295 aa9.67□□□□□ -0.86
CLHC1-205ENST00000411884 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.66□□□□□ -0.86
CLHC1-205ENST00000411884 ARHGEF1Q92888 912 aaKnown RBP9.65□□□□□ -0.86
CLHC1-205ENST00000411884 NBR1Q14596 966 aa9.64□□□□□ -0.87
CLHC1-205ENST00000411884 EMILIN3Q9NT22 766 aa9.63□□□□□ -0.87
CLHC1-205ENST00000411884 ARIH1Q9Y4X5 557 aaPredicted RBP9.63□□□□□ -0.87
CLHC1-205ENST00000411884 MAMSTRQ6ZN01 415 aa9.58□□□□□ -0.88
CLHC1-205ENST00000411884 SCUBE2Q9NQ36 999 aa9.57□□□□□ -0.88
CLHC1-205ENST00000411884 DPYSL4O14531 572 aa9.56□□□□□ -0.88
CLHC1-205ENST00000411884 SLAIN1Q8ND83 568 aa9.55□□□□□ -0.88
CLHC1-205ENST00000411884 OXER1Q8TDS5 423 aa9.55□□□□□ -0.88
CLHC1-205ENST00000411884 SEMA3EO15041 775 aa9.53□□□□□ -0.88
CLHC1-205ENST00000411884 SLC34A2O95436 690 aa9.53□□□□□ -0.88
CLHC1-205ENST00000411884 LHX8Q68G74 356 aa9.53□□□□□ -0.88
CLHC1-205ENST00000411884 UPF1Q92900 1129 aaKnown RBP eCLIP9.53□□□□□ -0.88
CLHC1-205ENST00000411884 OTUD5Q96G74 571 aa9.53□□□□□ -0.88
CLHC1-205ENST00000411884 PTCD2Q8WV60 388 aaKnown RBP9.52□□□□□ -0.89
CLHC1-205ENST00000411884 TESPA1A2RU30 521 aaPredicted RBP9.51□□□□□ -0.89
CLHC1-205ENST00000411884 PDIA6Q15084 440 aa9.51□□□□□ -0.89
CLHC1-205ENST00000411884 SPDYE16A6NNV3 312 aaPredicted RBP9.5□□□□□ -0.89
CLHC1-205ENST00000411884 HOXB3P14651 431 aaPredicted RBP9.5□□□□□ -0.89
CLHC1-205ENST00000411884 MAP3K9P80192 1104 aa9.5□□□□□ -0.89
CLHC1-205ENST00000411884 PCDHGA4Q9Y5G9 962 aa9.46□□□□□ -0.9
CLHC1-205ENST00000411884 MLLT3P42568 568 aaPredicted RBP9.45□□□□□ -0.9
CLHC1-205ENST00000411884 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLHC1-205ENST00000411884 TBC1D12O60347 775 aa9.44□□□□□ -0.9
CLHC1-205ENST00000411884 EVI5O60447 810 aa9.44□□□□□ -0.9
CLHC1-205ENST00000411884 DOK7Q18PE1 504 aa9.44□□□□□ -0.9
CLHC1-205ENST00000411884 KDM4FA0A1W2PPD8 638 aa9.43□□□□□ -0.9
CLHC1-205ENST00000411884 ANO8Q9HCE9 1232 aaPredicted RBP9.42□□□□□ -0.9
CLHC1-205ENST00000411884 PTGER2P43116 358 aa9.41□□□□□ -0.9
CLHC1-205ENST00000411884 LMOD2Q6P5Q4 547 aa9.41□□□□□ -0.9
CLHC1-205ENST00000411884 GPR153Q6NV75 609 aa9.4□□□□□ -0.9
CLHC1-205ENST00000411884 ZSWIM6Q9HCJ5 1215 aa9.4□□□□□ -0.9
CLHC1-205ENST00000411884 SNPHO15079 494 aa9.39□□□□□ -0.91
CLHC1-205ENST00000411884 ARSIQ5FYB1 569 aa9.39□□□□□ -0.91
CLHC1-205ENST00000411884 SMYD5Q6GMV2 418 aa9.39□□□□□ -0.91
CLHC1-205ENST00000411884 KHSRPQ92945 711 aaKnown RBP eCLIP9.39□□□□□ -0.911e-6■■□□□ 13.8
CLHC1-205ENST00000411884 TULP1O00294 542 aaPredicted RBP9.38□□□□□ -0.91
CLHC1-205ENST00000411884 RIMBP2O15034 1052 aa9.38□□□□□ -0.91
CLHC1-205ENST00000411884 PRKCSHP14314 528 aaPredicted RBP9.38□□□□□ -0.91
CLHC1-205ENST00000411884 TPRNQ4KMQ1 711 aa9.38□□□□□ -0.91
CLHC1-205ENST00000411884 GRXCR2A6NFK2 248 aa9.37□□□□□ -0.91
CLHC1-205ENST00000411884 ZNF710Q8N1W2 664 aa9.37□□□□□ -0.91
CLHC1-205ENST00000411884 DDX12PQ92771 950 aa9.37□□□□□ -0.91
CLHC1-205ENST00000411884 ZNF316A6NFI3 1004 aaPredicted RBP9.36□□□□□ -0.91
CLHC1-205ENST00000411884 NUDT7P0C024 238 aa9.35□□□□□ -0.91
CLHC1-205ENST00000411884 OSBPP22059 807 aa9.35□□□□□ -0.91
CLHC1-205ENST00000411884 RBM26Q5T8P6 1007 aaKnown RBP9.35□□□□□ -0.91
CLHC1-205ENST00000411884 PRIM1P49642 420 aaKnown RBP9.33□□□□□ -0.92
CLHC1-205ENST00000411884 HOXB1P14653 301 aaPredicted RBP9.32□□□□□ -0.92
CLHC1-205ENST00000411884 PCDHGA10Q9Y5H3 936 aa9.31□□□□□ -0.92
CLHC1-205ENST00000411884 PHF14O94880 888 aa9.3□□□□□ -0.92
CLHC1-205ENST00000411884 FOSBP53539 338 aa9.29□□□□□ -0.92
CLHC1-205ENST00000411884 ZC3H15Q8WU90 426 aaKnown RBP9.29□□□□□ -0.92
CLHC1-205ENST00000411884 JPH4Q96JJ6 628 aa9.29□□□□□ -0.92
CLHC1-205ENST00000411884 EPAS1Q99814 870 aa9.29□□□□□ -0.92
CLHC1-205ENST00000411884 LHX6Q9UPM6 363 aa9.29□□□□□ -0.92
CLHC1-205ENST00000411884 GPR37O15354 613 aa9.26□□□□□ -0.93
CLHC1-205ENST00000411884 ST18O60284 1047 aa9.26□□□□□ -0.93
CLHC1-205ENST00000411884 TYW1BQ6NUM6 668 aa9.26□□□□□ -0.93
CLHC1-205ENST00000411884 GPIHBP1Q8IV16 184 aa9.26□□□□□ -0.93
CLHC1-205ENST00000411884 EN1Q05925 392 aaPredicted RBP9.25□□□□□ -0.93
CLHC1-205ENST00000411884 ZNF454Q8N9F8 522 aa9.25□□□□□ -0.93
CLHC1-205ENST00000411884 NUTM2FA1L443 756 aa9.23□□□□□ -0.93
CLHC1-205ENST00000411884 ZMYND10O75800 440 aa9.23□□□□□ -0.93
CLHC1-205ENST00000411884 FBXW7Q969H0 707 aa9.23□□□□□ -0.93
CLHC1-205ENST00000411884 ZDHHC16Q969W1 377 aa9.23□□□□□ -0.93
CLHC1-205ENST00000411884 RBM33Q96EV2 1170 aaKnown RBP9.23□□□□□ -0.93
CLHC1-205ENST00000411884 ADAM33Q9BZ11 813 aa9.22□□□□□ -0.93
CLHC1-205ENST00000411884 MAP3K7O43318 606 aa9.21□□□□□ -0.94
CLHC1-205ENST00000411884 TSR1Q2NL82 804 aaKnown RBP9.21□□□□□ -0.94
CLHC1-205ENST00000411884 FAM163AQ96GL9 167 aaPredicted RBP9.21□□□□□ -0.94
CLHC1-205ENST00000411884 CDHR5Q9HBB8 845 aa9.21□□□□□ -0.94
CLHC1-205ENST00000411884 PSDA5PKW4 1024 aaPredicted RBP9.2□□□□□ -0.94
CLHC1-205ENST00000411884 LCE2DQ5TA82 110 aaPredicted RBP9.2□□□□□ -0.94
CLHC1-205ENST00000411884 BARGINQ6ZT62 677 aa9.2□□□□□ -0.94
CLHC1-205ENST00000411884 NPDC1Q9NQX5 325 aaPredicted RBP9.2□□□□□ -0.94
CLHC1-205ENST00000411884 PTGDRQ13258 359 aa9.19□□□□□ -0.94
CLHC1-205ENST00000411884 PPP4R3BQ5MIZ7 849 aa9.19□□□□□ -0.94
CLHC1-205ENST00000411884 C6orf132Q5T0Z8 1188 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms