RNA–Protein interactions for RNA: ENST00000408512.1

RNU4ATAC16P-201, Transcript of RNA, U4atac small nuclear 16, pseudogene, humanhuman

BASIC

Gene RNU4ATAC16P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC16P-201ENST00000408512 BRPF3Q9ULD4 1205 aa3.57□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 MKRN4PQ13434 485 aaPredicted RBP3.56□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 IRF5Q13568 498 aa3.56□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 BARGINQ6ZT62 677 aa3.56□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 ZFP91Q96JP5 570 aaPredicted RBP3.56□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 BCCIPQ9P287 314 aaKnown RBP eCLIP3.56□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 PPM1GO15355 546 aaPredicted RBP3.55□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 TMED8Q6PL24 325 aaPredicted RBP3.55□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 TICAM2Q86XR7 235 aa3.55□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 ZNF592Q92610 1267 aa3.55□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 BCL11BQ9C0K0 894 aaPredicted RBP3.55□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 KDM4CQ9H3R0 1056 aa3.55□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.55□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 ZNF316A6NFI3 1004 aaPredicted RBP3.54□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 SPDYE2BA6NHP3 402 aa3.54□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 A6NJR5 290 aa3.54□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 GALR2O43603 387 aaPredicted RBP3.54□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 SPDYE6P0CI01 402 aa3.54□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 SPDYE2Q495Y8 402 aa3.54□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 CCDC125Q86Z20 511 aa3.54□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 CLUAP1Q96AJ1 413 aa3.54□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 FAM163AQ96GL9 167 aaPredicted RBP3.54□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 FLIIQ13045 1269 aa3.53□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 RETREG2Q8NC44 543 aa3.53□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 RNF25Q96BH1 459 aaPredicted RBP3.53□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 CIZ1Q9ULV3 898 aaPredicted RBP3.53□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 CADPSQ9ULU8 1353 aa3.52□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 ARID4BQ4LE39 1312 aaPredicted RBP3.52□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 ONECUT3O60422 494 aaPredicted RBP3.52□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 CLSTN1O94985 981 aa3.52□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 CC2D2BQ6DHV5 1058 aa3.52□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 FBXW7Q969H0 707 aa3.52□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 PSMD1Q99460 953 aa3.52□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 ZNF777Q9ULD5 760 aaPredicted RBP3.52□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 TESPA1A2RU30 521 aaPredicted RBP3.51□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 SEMA3EO15041 775 aa3.51□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 IRX6P78412 446 aaPredicted RBP3.51□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 AK7Q96M32 723 aa3.51□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 IGSF5Q9NSI5 407 aa3.51□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 AMOTL2Q9Y2J4 779 aa3.51□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 FARP1Q9Y4F1 1045 aaPredicted RBP3.51□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 KDM4AO75164 1064 aa3.5□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 CADPS2Q86UW7 1296 aa3.5□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 ZNF579Q8NAF0 562 aaKnown RBP3.5□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 PKNOX2Q96KN3 472 aa3.5□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 FAM117AQ9C073 453 aa3.5□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 PRDM16Q9HAZ2 1276 aa3.5□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 UNCXA6NJT0 531 aa3.49□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 PRR29P0C7W0 189 aa3.49□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 CLCN6P51797 869 aa3.49□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 FGD1P98174 961 aa3.49□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 CCDC27Q2M243 656 aa3.49□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 CDAN1Q8IWY9 1227 aa3.49□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 TRIM41Q8WV44 630 aa3.49□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 SERPINA10Q9UK55 444 aa3.49□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 SSUH2Q9Y2M2 353 aa3.49□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 PLEKHG3A1L390 1219 aa3.48□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 ARHGEF1Q92888 912 aaKnown RBP3.48□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 CCDC136Q96JN2 1154 aa3.48□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 TRIM66O15016 1216 aa3.47□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 PDE4DQ08499 809 aa3.47□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 PLCD3Q8N3E9 789 aa3.47□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 FNBP4Q8N3X1 1017 aaPredicted RBP3.47□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 CCDC97Q96F63 343 aaPredicted RBP3.47□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 ZRANB1Q9UGI0 708 aa3.47□□□□□ -1.85
RNU4ATAC16P-201ENST00000408512 SMARCA5O60264 1052 aaPredicted RBP3.46□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 CANXP27824 592 aaKnown RBP3.46□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 MMRN1Q13201 1228 aa3.46□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 ZNF526Q8TF50 670 aaPredicted RBP3.46□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 ARIH1Q9Y4X5 557 aaPredicted RBP3.46□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 A0A0U1RQG5 324 aaPredicted RBP3.45□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 STK25O00506 426 aa3.45□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 ZNF326Q5BKZ1 582 aaKnown RBP3.45□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 KRI1Q8N9T8 703 aaKnown RBP3.45□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 SPATA32Q96LK8 384 aa3.45□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 LOC102724159A0A0B4J2E5 919 aa3.44□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 PWP2Q15269 919 aaKnown RBP3.44□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 PROSER2Q86WR7 435 aaPredicted RBP3.44□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 TEX2Q8IWB9 1127 aa3.44□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 MIER1Q8N108 512 aa3.44□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 PHF12Q96QT6 1004 aa3.44□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 METRNQ9UJH8 293 aa3.44□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 RIOK3O14730 519 aaKnown RBP3.43□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 KCNA1Q09470 495 aa3.43□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 SPNS2Q8IVW8 549 aa3.43□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 ANKRD13AQ8IZ07 590 aa3.43□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 POM121Q96HA1 1249 aa3.43□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 STAG3Q9UJ98 1225 aa3.43□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 ZC3H4Q9UPT8 1303 aaKnown RBP3.43□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 POTEFA5A3E0 1075 aa3.42□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 PATL2C9JE40 543 aaKnown RBP3.42□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 MCM6Q14566 821 aa3.42□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 PABPN1Q86U42 306 aaKnown RBP eCLIP3.42□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 RYDENQ9NUL5 291 aaKnown RBP3.42□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 KIAA1522Q9P206 1035 aaPredicted RBP3.42□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 RIPOR2Q9Y4F9 1068 aa3.42□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 RBM47A0AV96 593 aaKnown RBP3.41□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 PPP1R15AO75807 674 aaPredicted RBP3.41□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 BRD1O95696 1058 aa3.41□□□□□ -1.86
RNU4ATAC16P-201ENST00000408512 E2F4Q16254 413 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms