RNA–Protein interactions for RNA: ENST00000407004.7

ILF3-202, Transcript of interleukin enhancer binding factor 3, humanhuman

TSL 1 (best) BASIC

Gene ILF3, Length 3,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ILF3-202ENST00000407004 DIP2BQ9P265 1576 aa17.75■□□□□ 0.43
ILF3-202ENST00000407004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.73■□□□□ 0.438e-25■■□□□ 12.7
ILF3-202ENST00000407004 RRBP1Q9P2E9 1410 aaKnown RBP17.73■□□□□ 0.43
ILF3-202ENST00000407004 PODXL2Q9NZ53 605 aa17.73■□□□□ 0.43
ILF3-202ENST00000407004 AEBP2Q6ZN18 517 aaPredicted RBP17.73■□□□□ 0.43
ILF3-202ENST00000407004 CDK11AQ9UQ88 783 aaPredicted RBP17.71■□□□□ 0.43
ILF3-202ENST00000407004 NCOA2Q15596 1464 aa17.71■□□□□ 0.43
ILF3-202ENST00000407004 KIF13AQ9H1H9 1805 aa17.71■□□□□ 0.43
ILF3-202ENST00000407004 CDC42BPBQ9Y5S2 1711 aa17.7■□□□□ 0.42
ILF3-202ENST00000407004 ASXL2Q76L83 1435 aa17.7■□□□□ 0.42
ILF3-202ENST00000407004 ARHGEF5Q12774 1597 aa17.69■□□□□ 0.42
ILF3-202ENST00000407004 TTC37Q6PGP7 1564 aa17.69■□□□□ 0.42
ILF3-202ENST00000407004 CROCC2H7BZ55 1655 aa17.68■□□□□ 0.42
ILF3-202ENST00000407004 PPRC1Q5VV67 1664 aaKnown RBP17.67■□□□□ 0.42
ILF3-202ENST00000407004 MAST1Q9Y2H9 1570 aa17.66■□□□□ 0.42
ILF3-202ENST00000407004 MYOM3Q5VTT5 1437 aa17.66■□□□□ 0.42
ILF3-202ENST00000407004 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
ILF3-202ENST00000407004 P3H3Q8IVL6 736 aa17.66■□□□□ 0.42
ILF3-202ENST00000407004 PLEKHH2Q8IVE3 1493 aa17.64■□□□□ 0.41
ILF3-202ENST00000407004 GPATCH8Q9UKJ3 1502 aaKnown RBP17.64■□□□□ 0.41
ILF3-202ENST00000407004 MTUS2Q5JR59 1369 aa17.62■□□□□ 0.41
ILF3-202ENST00000407004 PTPN23Q9H3S7 1636 aa17.62■□□□□ 0.41
ILF3-202ENST00000407004 PLCH2O75038 1416 aa17.62■□□□□ 0.41
ILF3-202ENST00000407004 NEO1Q92859 1461 aa17.62■□□□□ 0.41
ILF3-202ENST00000407004 KIAA1107Q9UPP5 1409 aa17.61■□□□□ 0.41
ILF3-202ENST00000407004 SHANK2Q9UPX8 1470 aa17.61■□□□□ 0.41
ILF3-202ENST00000407004 DNMT1P26358 1616 aaKnown RBP17.6■□□□□ 0.41
ILF3-202ENST00000407004 ABCC1P33527 1531 aa17.58■□□□□ 0.41
ILF3-202ENST00000407004 AKNAQ7Z591 1439 aa17.58■□□□□ 0.41
ILF3-202ENST00000407004 PLEKHD1A6NEE1 506 aa17.58■□□□□ 0.4
ILF3-202ENST00000407004 FGD6Q6ZV73 1430 aa17.58■□□□□ 0.4
ILF3-202ENST00000407004 SAMD9LQ8IVG5 1584 aa17.57■□□□□ 0.4
ILF3-202ENST00000407004 ADGBQ8N7X0 1667 aa17.57■□□□□ 0.4
ILF3-202ENST00000407004 BCORL1Q5H9F3 1711 aa17.54■□□□□ 0.4
ILF3-202ENST00000407004 TEX14Q8IWB6 1497 aa17.54■□□□□ 0.4
ILF3-202ENST00000407004 KANK4Q5T7N3 995 aaPredicted RBP17.54■□□□□ 0.4
ILF3-202ENST00000407004 ZMYM4Q5VZL5 1548 aa17.53■□□□□ 0.4
ILF3-202ENST00000407004 KDM5CP41229 1560 aa17.53■□□□□ 0.4
ILF3-202ENST00000407004 PLXNC1O60486 1568 aa17.53■□□□□ 0.4
ILF3-202ENST00000407004 MIER1Q8N108 512 aa17.53■□□□□ 0.4
ILF3-202ENST00000407004 ADGRL2O95490 1459 aa17.53■□□□□ 0.4
ILF3-202ENST00000407004 NPM1P06748 294 aaKnown RBP eCLIP17.52■□□□□ 0.39
ILF3-202ENST00000407004 ZNF316A6NFI3 1004 aaPredicted RBP17.51■□□□□ 0.39
ILF3-202ENST00000407004 SALL2Q9Y467 1007 aaPredicted RBP17.5■□□□□ 0.39
ILF3-202ENST00000407004 GCC2Q8IWJ2 1684 aa17.5■□□□□ 0.39
ILF3-202ENST00000407004 CAMSAP2Q08AD1 1489 aa17.5■□□□□ 0.39
ILF3-202ENST00000407004 TSHZ2Q9NRE2 1034 aa17.5■□□□□ 0.39
ILF3-202ENST00000407004 REREQ9P2R6 1566 aa17.49■□□□□ 0.39
ILF3-202ENST00000407004 CCNB3Q8WWL7 1395 aa17.49■□□□□ 0.39
ILF3-202ENST00000407004 RICTORQ6R327 1708 aa17.49■□□□□ 0.39
ILF3-202ENST00000407004 INO80Q9ULG1 1556 aaPredicted RBP17.49■□□□□ 0.39
ILF3-202ENST00000407004 MBD5Q9P267 1494 aa17.48■□□□□ 0.39
ILF3-202ENST00000407004 RANGAP1P46060 587 aaPredicted RBP17.47■□□□□ 0.39
ILF3-202ENST00000407004 RTEL1-TNFRSF6BF6WH68 1400 aa17.46■□□□□ 0.39
ILF3-202ENST00000407004 ROCK1Q13464 1354 aa17.46■□□□□ 0.38
ILF3-202ENST00000407004 UBE2Q2Q8WVN8 375 aa17.45■□□□□ 0.38
ILF3-202ENST00000407004 RSPH4AQ5TD94 716 aa17.45■□□□□ 0.38
ILF3-202ENST00000407004 PKNOX2Q96KN3 472 aa17.44■□□□□ 0.38
ILF3-202ENST00000407004 ARHGAP5Q13017 1502 aa17.44■□□□□ 0.38
ILF3-202ENST00000407004 CYB5RLQ6IPT4 315 aa17.44■□□□□ 0.38
ILF3-202ENST00000407004 SUPT16HQ9Y5B9 1047 aaKnown RBP17.43■□□□□ 0.38
ILF3-202ENST00000407004 FRMPD1Q5SYB0 1578 aa17.43■□□□□ 0.38
ILF3-202ENST00000407004 CD109Q6YHK3 1445 aa17.43■□□□□ 0.38
ILF3-202ENST00000407004 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.43■□□□□ 0.38
ILF3-202ENST00000407004 EIF2AK4Q9P2K8 1649 aaKnown RBP17.42■□□□□ 0.38
ILF3-202ENST00000407004 FANCAO15360 1455 aa17.42■□□□□ 0.38
ILF3-202ENST00000407004 CCDC141Q6ZP82 1450 aa17.41■□□□□ 0.38
ILF3-202ENST00000407004 MAGI2Q86UL8 1455 aa17.41■□□□□ 0.38
ILF3-202ENST00000407004 FAM135AQ9P2D6 1515 aa17.41■□□□□ 0.38
ILF3-202ENST00000407004 MLH3Q9UHC1 1453 aa17.39■□□□□ 0.37
ILF3-202ENST00000407004 DAPK1P53355 1430 aa17.38■□□□□ 0.37
ILF3-202ENST00000407004 ZFYVE16Q7Z3T8 1539 aa17.37■□□□□ 0.37
ILF3-202ENST00000407004 POGZQ7Z3K3 1410 aa17.37■□□□□ 0.37
ILF3-202ENST00000407004 ZNF518AQ6AHZ1 1483 aa17.37■□□□□ 0.37
ILF3-202ENST00000407004 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
ILF3-202ENST00000407004 ARHGEF12Q9NZN5 1544 aa17.37■□□□□ 0.37
ILF3-202ENST00000407004 HECW2Q9P2P5 1572 aa17.37■□□□□ 0.37
ILF3-202ENST00000407004 ABCC5O15440 1437 aa17.35■□□□□ 0.37
ILF3-202ENST00000407004 DEPDC5O75140 1603 aa17.34■□□□□ 0.37
ILF3-202ENST00000407004 KIDINS220Q9ULH0 1771 aa17.33■□□□□ 0.36
ILF3-202ENST00000407004 EFCAB2Q5VUJ9 269 aa17.33■□□□□ 0.36
ILF3-202ENST00000407004 KDM5DQ9BY66 1539 aa17.33■□□□□ 0.36
ILF3-202ENST00000407004 ADGRL1O94910 1474 aa17.33■□□□□ 0.36
ILF3-202ENST00000407004 HFM1A2PYH4 1435 aa17.31■□□□□ 0.36
ILF3-202ENST00000407004 RNF17Q9BXT8 1623 aaKnown RBP17.31■□□□□ 0.36
ILF3-202ENST00000407004 UNC13BO14795 1591 aa17.3■□□□□ 0.36
ILF3-202ENST00000407004 ATP7AQ04656 1500 aa17.29■□□□□ 0.36
ILF3-202ENST00000407004 ARHGEF40Q8TER5 1519 aa17.29■□□□□ 0.36
ILF3-202ENST00000407004 DUOX2Q9NRD8 1548 aa17.29■□□□□ 0.36
ILF3-202ENST00000407004 DENND4BO75064 1496 aaPredicted RBP17.29■□□□□ 0.36
ILF3-202ENST00000407004 AGLP35573 1532 aa17.29■□□□□ 0.36
ILF3-202ENST00000407004 BCANQ96GW7 911 aa17.28■□□□□ 0.36
ILF3-202ENST00000407004 ATP1B4Q9UN42 357 aaPredicted RBP17.27■□□□□ 0.36
ILF3-202ENST00000407004 CFDP1Q9UEE9 299 aaPredicted RBP17.27■□□□□ 0.36
ILF3-202ENST00000407004 ERBINQ96RT1 1412 aa17.27■□□□□ 0.35
ILF3-202ENST00000407004 DIP2CQ9Y2E4 1556 aa17.25■□□□□ 0.35
ILF3-202ENST00000407004 HNRNPUL2Q1KMD3 747 aaKnown RBP17.25■□□□□ 0.35
ILF3-202ENST00000407004 C9orf84Q5VXU9 1444 aa17.24■□□□□ 0.35
ILF3-202ENST00000407004 ABCA6Q8N139 1617 aa17.24■□□□□ 0.35
ILF3-202ENST00000407004 VWDEQ8N2E2 1590 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms