RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 RTF1Q92541 710 aaKnown RBP14.15□□□□□ -0.14
CACNA1C-215ENST00000399637 PATL2C9JE40 543 aaKnown RBP14.15□□□□□ -0.14
CACNA1C-215ENST00000399637 EVA1CP58658 441 aa14.15□□□□□ -0.14
CACNA1C-215ENST00000399637 PNNQ9H307 717 aaKnown RBP14.15□□□□□ -0.14
CACNA1C-215ENST00000399637 NOC3LQ8WTT2 800 aaKnown RBP14.13□□□□□ -0.15
CACNA1C-215ENST00000399637 TAF7LQ5H9L4 462 aa14.13□□□□□ -0.15
CACNA1C-215ENST00000399637 VPS53Q5VIR6 699 aa14.13□□□□□ -0.15
CACNA1C-215ENST00000399637 CHMP3Q9Y3E7 222 aa14.13□□□□□ -0.15
CACNA1C-215ENST00000399637 MS4A1P11836 297 aa14.12□□□□□ -0.15
CACNA1C-215ENST00000399637 EID1Q9Y6B2 187 aa14.12□□□□□ -0.15
CACNA1C-215ENST00000399637 GNL2Q13823 731 aaKnown RBP14.12□□□□□ -0.15
CACNA1C-215ENST00000399637 WWC1Q8IX03 1113 aa14.12□□□□□ -0.15
CACNA1C-215ENST00000399637 CARD11Q9BXL7 1154 aa14.11□□□□□ -0.15
CACNA1C-215ENST00000399637 WRNQ14191 1432 aaPredicted RBP eCLIP14.11□□□□□ -0.15
CACNA1C-215ENST00000399637 NACADO15069 1562 aa14.11□□□□□ -0.15
CACNA1C-215ENST00000399637 FRAT2O75474 233 aaPredicted RBP14.11□□□□□ -0.15
CACNA1C-215ENST00000399637 FOXD1Q16676 465 aa14.11□□□□□ -0.15
CACNA1C-215ENST00000399637 GOLGA6L4A6NEF3 574 aa14.1□□□□□ -0.15
CACNA1C-215ENST00000399637 FRAT1Q92837 279 aaPredicted RBP14.1□□□□□ -0.15
CACNA1C-215ENST00000399637 PPP1R1BQ9UD71 204 aaPredicted RBP14.1□□□□□ -0.15
CACNA1C-215ENST00000399637 SF3B2Q13435 895 aaKnown RBP14.09□□□□□ -0.15
CACNA1C-215ENST00000399637 L1TD1Q5T7N2 865 aaKnown RBP14.09□□□□□ -0.15
CACNA1C-215ENST00000399637 CHAF1AQ13111 956 aaPredicted RBP14.08□□□□□ -0.15
CACNA1C-215ENST00000399637 CTDP1Q9Y5B0 961 aaPredicted RBP14.08□□□□□ -0.15
CACNA1C-215ENST00000399637 MCCP23508 829 aa14.08□□□□□ -0.16
CACNA1C-215ENST00000399637 CLIP1P30622 1438 aa14.07□□□□□ -0.16
CACNA1C-215ENST00000399637 FBXW7Q969H0 707 aa14.07□□□□□ -0.16
CACNA1C-215ENST00000399637 GORABQ5T7V8 394 aa14.07□□□□□ -0.16
CACNA1C-215ENST00000399637 SUPT16HQ9Y5B9 1047 aaKnown RBP14.07□□□□□ -0.16
CACNA1C-215ENST00000399637 RGS3P49796 1198 aa14.06□□□□□ -0.16
CACNA1C-215ENST00000399637 HSCBQ8IWL3 235 aa14.05□□□□□ -0.16
CACNA1C-215ENST00000399637 DRC7Q8IY82 874 aa14.05□□□□□ -0.16
CACNA1C-215ENST00000399637 KIAA2012Q0VF49 1180 aa14.05□□□□□ -0.16
CACNA1C-215ENST00000399637 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
CACNA1C-215ENST00000399637 A0A0U1RQG5 324 aaPredicted RBP14.04□□□□□ -0.16
CACNA1C-215ENST00000399637 TRIM34Q9BYJ4 488 aa14.04□□□□□ -0.16
CACNA1C-215ENST00000399637 CC2D1BQ5T0F9 858 aaKnown RBP14.03□□□□□ -0.16
CACNA1C-215ENST00000399637 EIF4G1Q04637 1599 aaKnown RBP14.03□□□□□ -0.16
CACNA1C-215ENST00000399637 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
CACNA1C-215ENST00000399637 RAD21O60216 631 aa14.02□□□□□ -0.16
CACNA1C-215ENST00000399637 NGDNQ8NEJ9 315 aaKnown RBP14□□□□□ -0.17
CACNA1C-215ENST00000399637 CFAP44Q96MT7 982 aa14□□□□□ -0.17
CACNA1C-215ENST00000399637 HDGFL2Q7Z4V5 671 aaPredicted RBP14□□□□□ -0.17
CACNA1C-215ENST00000399637 SYTL4Q96C24 671 aaPredicted RBP14□□□□□ -0.17
CACNA1C-215ENST00000399637 MSNP26038 577 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-215ENST00000399637 LTV1Q96GA3 475 aaPredicted RBP13.99□□□□□ -0.17
CACNA1C-215ENST00000399637 NUTM2FA1L443 756 aa13.99□□□□□ -0.17
CACNA1C-215ENST00000399637 CALRP27797 417 aaKnown RBP13.99□□□□□ -0.17
CACNA1C-215ENST00000399637 PPP4R2Q9NY27 417 aa13.98□□□□□ -0.17
CACNA1C-215ENST00000399637 TCEAL9Q9UHQ7 104 aa13.98□□□□□ -0.17
CACNA1C-215ENST00000399637 NOP58Q9Y2X3 529 aaKnown RBP13.98□□□□□ -0.17
CACNA1C-215ENST00000399637 MARCH6O60337 910 aa13.97□□□□□ -0.17
CACNA1C-215ENST00000399637 CYB5RLQ6IPT4 315 aa13.97□□□□□ -0.17
CACNA1C-215ENST00000399637 TNNT3P45378 269 aaPredicted RBP13.95□□□□□ -0.18
CACNA1C-215ENST00000399637 TMF1P82094 1093 aa13.95□□□□□ -0.18
CACNA1C-215ENST00000399637 APBB1O00213 710 aa13.94□□□□□ -0.18
CACNA1C-215ENST00000399637 SPRYD3Q8NCJ5 442 aa13.94□□□□□ -0.18
CACNA1C-215ENST00000399637 CCER2I3L3R5 266 aa13.94□□□□□ -0.18
CACNA1C-215ENST00000399637 NUTM2DQ5VT03 806 aaPredicted RBP13.93□□□□□ -0.18
CACNA1C-215ENST00000399637 SAMD1Q6SPF0 538 aaPredicted RBP13.93□□□□□ -0.18
CACNA1C-215ENST00000399637 TOMM22Q9NS69 142 aa13.93□□□□□ -0.18
CACNA1C-215ENST00000399637 KIAA1211Q6ZU35 1233 aa13.92□□□□□ -0.18
CACNA1C-215ENST00000399637 RASSF8Q8NHQ8 419 aa13.92□□□□□ -0.18
CACNA1C-215ENST00000399637 MORC1Q86VD1 984 aa13.91□□□□□ -0.18
CACNA1C-215ENST00000399637 BAZ1AQ9NRL2 1556 aaPredicted RBP13.91□□□□□ -0.18
CACNA1C-215ENST00000399637 PTMSP20962 102 aa13.9□□□□□ -0.18
CACNA1C-215ENST00000399637 CREBRFQ8IUR6 639 aa13.9□□□□□ -0.18
CACNA1C-215ENST00000399637 HTATSF1O43719 755 aaKnown RBP13.89□□□□□ -0.19
CACNA1C-215ENST00000399637 AMPHP49418 695 aa13.89□□□□□ -0.19
CACNA1C-215ENST00000399637 TPM4P67936 248 aa13.89□□□□□ -0.19
CACNA1C-215ENST00000399637 NOL10Q9BSC4 688 aaKnown RBP13.88□□□□□ -0.19
CACNA1C-215ENST00000399637 VPS8Q8N3P4 1428 aa13.88□□□□□ -0.19
CACNA1C-215ENST00000399637 CCAR1Q8IX12 1150 aaKnown RBP13.88□□□□□ -0.19
CACNA1C-215ENST00000399637 TSHZ2Q9NRE2 1034 aa13.87□□□□□ -0.19
CACNA1C-215ENST00000399637 CCNB3Q8WWL7 1395 aa13.86□□□□□ -0.19
CACNA1C-215ENST00000399637 APPP05067 770 aa13.85□□□□□ -0.19
CACNA1C-215ENST00000399637 PIP4K2BP78356 416 aa13.85□□□□□ -0.19
CACNA1C-215ENST00000399637 IPO8O15397 1037 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-215ENST00000399637 SPAG9O60271 1321 aaKnown RBP13.85□□□□□ -0.19
CACNA1C-215ENST00000399637 HSP90B1P14625 803 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-215ENST00000399637 DCAF11Q8TEB1 546 aa13.84□□□□□ -0.19
CACNA1C-215ENST00000399637 CEP89Q96ST8 783 aa13.84□□□□□ -0.19
CACNA1C-215ENST00000399637 CALD1Q05682 793 aaKnown RBP13.84□□□□□ -0.19
CACNA1C-215ENST00000399637 GPATCH3Q96I76 525 aa13.83□□□□□ -0.2
CACNA1C-215ENST00000399637 GBP4Q96PP9 640 aa13.83□□□□□ -0.2
CACNA1C-215ENST00000399637 KIF27Q86VH2 1401 aa13.82□□□□□ -0.2
CACNA1C-215ENST00000399637 NUTM2BA6NNL0 878 aaPredicted RBP13.82□□□□□ -0.2
CACNA1C-215ENST00000399637 NUTM2EB1AL46 878 aaPredicted RBP13.82□□□□□ -0.2
CACNA1C-215ENST00000399637 NUTM2AQ8IVF1 878 aaPredicted RBP13.82□□□□□ -0.2
CACNA1C-215ENST00000399637 NGEFQ8N5V2 710 aa13.81□□□□□ -0.2
CACNA1C-215ENST00000399637 AMOTL1Q8IY63 956 aa13.81□□□□□ -0.2
CACNA1C-215ENST00000399637 B4GALNT3Q6L9W6 998 aa13.81□□□□□ -0.2
CACNA1C-215ENST00000399637 SYAP1Q96A49 352 aaPredicted RBP13.81□□□□□ -0.2
CACNA1C-215ENST00000399637 ATF3P18847 181 aa13.8□□□□□ -0.2
CACNA1C-215ENST00000399637 CCDC34Q96HJ3 373 aa13.8□□□□□ -0.2
CACNA1C-215ENST00000399637 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
CACNA1C-215ENST00000399637 PAXIP1Q6ZW49 1069 aaPredicted RBP13.8□□□□□ -0.2
CACNA1C-215ENST00000399637 RBM19Q9Y4C8 960 aaKnown RBP13.8□□□□□ -0.2
CACNA1C-215ENST00000399637 C1orf141Q5JVX7 400 aa13.79□□□□□ -0.2
CACNA1C-215ENST00000399637 STK31Q9BXU1 1019 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms