RNA–Protein interactions for RNA: ENST00000398465.3

VPREB3-202, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

TSL 3 BASIC

Gene VPREB3, Length 503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-202ENST00000398465 DENND4BO75064 1496 aaPredicted RBP20.46■□□□□ 0.87
VPREB3-202ENST00000398465 ADGRL1O94910 1474 aa20.46■□□□□ 0.87
VPREB3-202ENST00000398465 LOC105371045A0A1W2PR82 267 aa20.46■□□□□ 0.87
VPREB3-202ENST00000398465 ITSN2Q9NZM3 1697 aa20.45■□□□□ 0.86
VPREB3-202ENST00000398465 POGZQ7Z3K3 1410 aa20.42■□□□□ 0.86
VPREB3-202ENST00000398465 ABCC1P33527 1531 aa20.42■□□□□ 0.86
VPREB3-202ENST00000398465 SUPT6HQ7KZ85 1726 aaKnown RBP20.41■□□□□ 0.86
VPREB3-202ENST00000398465 MAP3K1Q13233 1512 aa20.4■□□□□ 0.86
VPREB3-202ENST00000398465 KDM5CP41229 1560 aa20.39■□□□□ 0.85
VPREB3-202ENST00000398465 MTUS2Q5JR59 1369 aa20.39■□□□□ 0.85
VPREB3-202ENST00000398465 MAGI2Q86UL8 1455 aa20.37■□□□□ 0.85
VPREB3-202ENST00000398465 ZFYVE16Q7Z3T8 1539 aa20.37■□□□□ 0.85
VPREB3-202ENST00000398465 ZNF518AQ6AHZ1 1483 aa20.37■□□□□ 0.85
VPREB3-202ENST00000398465 EFCAB2Q5VUJ9 269 aa20.36■□□□□ 0.85
VPREB3-202ENST00000398465 SAMD9LQ8IVG5 1584 aa20.36■□□□□ 0.85
VPREB3-202ENST00000398465 SCAPERQ9BY12 1400 aa20.36■□□□□ 0.85
VPREB3-202ENST00000398465 HECW2Q9P2P5 1572 aa20.35■□□□□ 0.85
VPREB3-202ENST00000398465 GPATCH8Q9UKJ3 1502 aaKnown RBP20.35■□□□□ 0.85
VPREB3-202ENST00000398465 RAPGEF3O95398 923 aa20.34■□□□□ 0.85
VPREB3-202ENST00000398465 LRRC9Q6ZRR7 1453 aa20.3■□□□□ 0.84
VPREB3-202ENST00000398465 BCORL1Q5H9F3 1711 aa20.29■□□□□ 0.84
VPREB3-202ENST00000398465 CCNB3Q8WWL7 1395 aa20.29■□□□□ 0.84
VPREB3-202ENST00000398465 PLEKHH2Q8IVE3 1493 aa20.29■□□□□ 0.84
VPREB3-202ENST00000398465 SYCP2Q9BX26 1530 aa20.28■□□□□ 0.84
VPREB3-202ENST00000398465 NCOA2Q15596 1464 aa20.28■□□□□ 0.84
VPREB3-202ENST00000398465 SIGLEC1Q9BZZ2 1709 aa20.27■□□□□ 0.83
VPREB3-202ENST00000398465 ARHGEF12Q9NZN5 1544 aa20.27■□□□□ 0.83
VPREB3-202ENST00000398465 ADAMTSL3P82987 1691 aa20.26■□□□□ 0.83
VPREB3-202ENST00000398465 REREQ9P2R6 1566 aa20.26■□□□□ 0.83
VPREB3-202ENST00000398465 DIP2CQ9Y2E4 1556 aa20.25■□□□□ 0.83
VPREB3-202ENST00000398465 ABCA6Q8N139 1617 aa20.25■□□□□ 0.83
VPREB3-202ENST00000398465 KDM4FA0A1W2PPD8 638 aa20.25■□□□□ 0.83
VPREB3-202ENST00000398465 YEATS2Q9ULM3 1422 aa20.25■□□□□ 0.83
VPREB3-202ENST00000398465 MLH3Q9UHC1 1453 aa20.24■□□□□ 0.83
VPREB3-202ENST00000398465 AEBP2Q6ZN18 517 aaPredicted RBP20.24■□□□□ 0.83
VPREB3-202ENST00000398465 KIDINS220Q9ULH0 1771 aa20.23■□□□□ 0.83
VPREB3-202ENST00000398465 INO80Q9ULG1 1556 aaPredicted RBP20.23■□□□□ 0.83
VPREB3-202ENST00000398465 KIAA1107Q9UPP5 1409 aa20.23■□□□□ 0.83
VPREB3-202ENST00000398465 C9orf84Q5VXU9 1444 aa20.21■□□□□ 0.83
VPREB3-202ENST00000398465 TRAPPC8Q9Y2L5 1435 aa20.21■□□□□ 0.83
VPREB3-202ENST00000398465 MADDQ8WXG6 1647 aa20.19■□□□□ 0.82
VPREB3-202ENST00000398465 ATP10AO60312 1499 aa20.18■□□□□ 0.82
VPREB3-202ENST00000398465 CFDP1Q9UEE9 299 aaPredicted RBP20.18■□□□□ 0.82
VPREB3-202ENST00000398465 CAMSAP2Q08AD1 1489 aa20.18■□□□□ 0.82
VPREB3-202ENST00000398465 FER1L4A9Z1Z3 1794 aa20.17■□□□□ 0.82
VPREB3-202ENST00000398465 ATP7AQ04656 1500 aa20.17■□□□□ 0.82
VPREB3-202ENST00000398465 ARHGEF5Q12774 1597 aa20.15■□□□□ 0.82
VPREB3-202ENST00000398465 ADGBQ8N7X0 1667 aa20.14■□□□□ 0.81
VPREB3-202ENST00000398465 RIMS1Q86UR5 1692 aaKnown RBP20.13■□□□□ 0.81
VPREB3-202ENST00000398465 AFAP1Q8N556 730 aa20.13■□□□□ 0.81
VPREB3-202ENST00000398465 AGLP35573 1532 aa20.12■□□□□ 0.81
VPREB3-202ENST00000398465 MBD5Q9P267 1494 aa20.12■□□□□ 0.81
VPREB3-202ENST00000398465 ZNF777Q9ULD5 760 aaPredicted RBP20.12■□□□□ 0.81
VPREB3-202ENST00000398465 PLXNC1O60486 1568 aa20.12■□□□□ 0.81
VPREB3-202ENST00000398465 MYOM3Q5VTT5 1437 aa20.11■□□□□ 0.81
VPREB3-202ENST00000398465 CCDC141Q6ZP82 1450 aa20.11■□□□□ 0.81
VPREB3-202ENST00000398465 MIA2Q96PC5 1412 aa20.1■□□□□ 0.81
VPREB3-202ENST00000398465 APLP2Q06481 763 aa20.09■□□□□ 0.81
VPREB3-202ENST00000398465 CROCC2H7BZ55 1655 aa20.08■□□□□ 0.81
VPREB3-202ENST00000398465 KANK4Q5T7N3 995 aaPredicted RBP20.08■□□□□ 0.81
VPREB3-202ENST00000398465 ARID4BQ4LE39 1312 aaPredicted RBP20.07■□□□□ 0.8
VPREB3-202ENST00000398465 PTPRMP28827 1452 aa20.07■□□□□ 0.8
VPREB3-202ENST00000398465 MAST1Q9Y2H9 1570 aa20.06■□□□□ 0.8
VPREB3-202ENST00000398465 RTEL1-TNFRSF6BF6WH68 1400 aa20.05■□□□□ 0.8
VPREB3-202ENST00000398465 PTPN23Q9H3S7 1636 aa20.05■□□□□ 0.8
VPREB3-202ENST00000398465 SPAG9O60271 1321 aaKnown RBP20.04■□□□□ 0.8
VPREB3-202ENST00000398465 HNRNPMP52272 730 aaKnown RBP eCLIP20.04■□□□□ 0.8
VPREB3-202ENST00000398465 ZNF644Q9H582 1327 aaPredicted RBP20.03■□□□□ 0.8
VPREB3-202ENST00000398465 MYT1LQ9UL68 1186 aa20.02■□□□□ 0.8
VPREB3-202ENST00000398465 A2MP01023 1474 aa20.01■□□□□ 0.79
VPREB3-202ENST00000398465 MROH2AA6NES4 1674 aa20■□□□□ 0.79
VPREB3-202ENST00000398465 TCOF1Q13428 1488 aaKnown RBP19.99■□□□□ 0.79
VPREB3-202ENST00000398465 RSPH4AQ5TD94 716 aa19.99■□□□□ 0.79
VPREB3-202ENST00000398465 DNMT1P26358 1616 aaKnown RBP19.98■□□□□ 0.79
VPREB3-202ENST00000398465 FGD6Q6ZV73 1430 aa19.98■□□□□ 0.79
VPREB3-202ENST00000398465 SHANK2Q9UPX8 1470 aa19.98■□□□□ 0.79
VPREB3-202ENST00000398465 C3P01024 1663 aa19.95■□□□□ 0.78
VPREB3-202ENST00000398465 EIF2AK4Q9P2K8 1649 aaKnown RBP19.94■□□□□ 0.78
VPREB3-202ENST00000398465 FAM135AQ9P2D6 1515 aa19.93■□□□□ 0.78
VPREB3-202ENST00000398465 PREX1Q8TCU6 1659 aa19.92■□□□□ 0.78
VPREB3-202ENST00000398465 CNTLNQ9NXG0 1405 aa19.92■□□□□ 0.78
VPREB3-202ENST00000398465 CLTCQ00610 1675 aaKnown RBP19.91■□□□□ 0.78
VPREB3-202ENST00000398465 MLECQ14165 292 aa19.9■□□□□ 0.78
VPREB3-202ENST00000398465 RNF17Q9BXT8 1623 aaKnown RBP19.9■□□□□ 0.78
VPREB3-202ENST00000398465 DAPK1P53355 1430 aa19.87■□□□□ 0.77
VPREB3-202ENST00000398465 DHX29Q7Z478 1369 aaKnown RBP19.87■□□□□ 0.77
VPREB3-202ENST00000398465 ZC3H13Q5T200 1668 aaKnown RBP19.87■□□□□ 0.77
VPREB3-202ENST00000398465 LMTK3Q96Q04 1460 aa19.86■□□□□ 0.77
VPREB3-202ENST00000398465 ABCC5O15440 1437 aa19.85■□□□□ 0.77
VPREB3-202ENST00000398465 TSPY4P0CV99 314 aa19.85■□□□□ 0.77
VPREB3-202ENST00000398465 TSPY10P0CW01 314 aa19.85■□□□□ 0.77
VPREB3-202ENST00000398465 DUOX2Q9NRD8 1548 aa19.85■□□□□ 0.77
VPREB3-202ENST00000398465 KDM5DQ9BY66 1539 aa19.84■□□□□ 0.77
VPREB3-202ENST00000398465 SETD1BQ9UPS6 1966 aaKnown RBP19.82■□□□□ 0.76
VPREB3-202ENST00000398465 DEPDC5O75140 1603 aa19.8■□□□□ 0.76
VPREB3-202ENST00000398465 ADGRL2O95490 1459 aa19.8■□□□□ 0.76
VPREB3-202ENST00000398465 MROH1Q8NDA8 1641 aa19.8■□□□□ 0.76
VPREB3-202ENST00000398465 ERBINQ96RT1 1412 aa19.79■□□□□ 0.76
VPREB3-202ENST00000398465 PRDM15P57071 1507 aaPredicted RBP19.78■□□□□ 0.76
VPREB3-202ENST00000398465 ESF1Q9H501 851 aaKnown RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms