RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 ZFYVE16Q7Z3T8 1539 aa10.78□□□□□ -0.68
LMO3-205ENST00000396205 ZNF518AQ6AHZ1 1483 aa10.78□□□□□ -0.68
LMO3-205ENST00000396205 PLEKHH2Q8IVE3 1493 aa10.78□□□□□ -0.68
LMO3-205ENST00000396205 SUPT6HQ7KZ85 1726 aaKnown RBP10.78□□□□□ -0.68
LMO3-205ENST00000396205 MLH3Q9UHC1 1453 aa10.77□□□□□ -0.68
LMO3-205ENST00000396205 AGLP35573 1532 aa10.77□□□□□ -0.69
LMO3-205ENST00000396205 FAM135AQ9P2D6 1515 aa10.77□□□□□ -0.69
LMO3-205ENST00000396205 ADGRL1O94910 1474 aa10.77□□□□□ -0.69
LMO3-205ENST00000396205 INO80Q9ULG1 1556 aaPredicted RBP10.77□□□□□ -0.69
LMO3-205ENST00000396205 KIAA1107Q9UPP5 1409 aa10.76□□□□□ -0.69
LMO3-205ENST00000396205 SAMD9LQ8IVG5 1584 aa10.76□□□□□ -0.69
LMO3-205ENST00000396205 VPS8Q8N3P4 1428 aa10.75□□□□□ -0.69
LMO3-205ENST00000396205 P3H3Q8IVL6 736 aa10.75□□□□□ -0.69
LMO3-205ENST00000396205 DIP2CQ9Y2E4 1556 aa10.74□□□□□ -0.69
LMO3-205ENST00000396205 MROH2AA6NES4 1674 aa10.74□□□□□ -0.69
LMO3-205ENST00000396205 PLXNC1O60486 1568 aa10.74□□□□□ -0.69
LMO3-205ENST00000396205 ARHGEF5Q12774 1597 aa10.74□□□□□ -0.69
LMO3-205ENST00000396205 SIGLEC1Q9BZZ2 1709 aa10.74□□□□□ -0.69
LMO3-205ENST00000396205 ARHGAP5Q13017 1502 aa10.73□□□□□ -0.69
LMO3-205ENST00000396205 ARHGEF12Q9NZN5 1544 aa10.73□□□□□ -0.69
LMO3-205ENST00000396205 ADGBQ8N7X0 1667 aa10.73□□□□□ -0.69
LMO3-205ENST00000396205 KIDINS220Q9ULH0 1771 aa10.73□□□□□ -0.69
LMO3-205ENST00000396205 GPATCH8Q9UKJ3 1502 aaKnown RBP10.73□□□□□ -0.69
LMO3-205ENST00000396205 MAST1Q9Y2H9 1570 aa10.73□□□□□ -0.69
LMO3-205ENST00000396205 ABCA6Q8N139 1617 aa10.72□□□□□ -0.69
LMO3-205ENST00000396205 C9orf84Q5VXU9 1444 aa10.71□□□□□ -0.7
LMO3-205ENST00000396205 TTBK1Q5TCY1 1321 aaPredicted RBP10.71□□□□□ -0.7
LMO3-205ENST00000396205 FER1L4A9Z1Z3 1794 aa10.7□□□□□ -0.7
LMO3-205ENST00000396205 ATP10AO60312 1499 aa10.7□□□□□ -0.7
LMO3-205ENST00000396205 RTEL1-TNFRSF6BF6WH68 1400 aa10.68□□□□□ -0.7
LMO3-205ENST00000396205 KCNH8Q96L42 1107 aa10.68□□□□□ -0.7
LMO3-205ENST00000396205 CROCC2H7BZ55 1655 aa10.68□□□□□ -0.7
LMO3-205ENST00000396205 EFCAB2Q5VUJ9 269 aa10.68□□□□□ -0.7
LMO3-205ENST00000396205 LRRC9Q6ZRR7 1453 aa10.68□□□□□ -0.7
LMO3-205ENST00000396205 SCAPERQ9BY12 1400 aa10.68□□□□□ -0.7
LMO3-205ENST00000396205 MADDQ8WXG6 1647 aa10.67□□□□□ -0.7
LMO3-205ENST00000396205 KDM4FA0A1W2PPD8 638 aa10.67□□□□□ -0.7
LMO3-205ENST00000396205 EIF2AK4Q9P2K8 1649 aaKnown RBP10.67□□□□□ -0.7
LMO3-205ENST00000396205 MIA2Q96PC5 1412 aa10.66□□□□□ -0.7
LMO3-205ENST00000396205 ATP7AQ04656 1500 aa10.65□□□□□ -0.7
LMO3-205ENST00000396205 SYCP2Q9BX26 1530 aa10.65□□□□□ -0.7
LMO3-205ENST00000396205 MBD5Q9P267 1494 aa10.65□□□□□ -0.7
LMO3-205ENST00000396205 NCOA2Q15596 1464 aa10.64□□□□□ -0.71
LMO3-205ENST00000396205 SHANK2Q9UPX8 1470 aa10.63□□□□□ -0.71
LMO3-205ENST00000396205 ZC3H13Q5T200 1668 aaKnown RBP10.63□□□□□ -0.71
LMO3-205ENST00000396205 RIMS1Q86UR5 1692 aaKnown RBP10.63□□□□□ -0.71
LMO3-205ENST00000396205 PREX1Q8TCU6 1659 aa10.63□□□□□ -0.71
LMO3-205ENST00000396205 RNF17Q9BXT8 1623 aaKnown RBP10.63□□□□□ -0.71
LMO3-205ENST00000396205 PTPRMP28827 1452 aa10.62□□□□□ -0.71
LMO3-205ENST00000396205 TCOF1Q13428 1488 aaKnown RBP10.62□□□□□ -0.71
LMO3-205ENST00000396205 YEATS2Q9ULM3 1422 aa10.62□□□□□ -0.71
LMO3-205ENST00000396205 MTUS2Q5JR59 1369 aa10.61□□□□□ -0.71
LMO3-205ENST00000396205 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.61□□□□□ -0.71
LMO3-205ENST00000396205 HNRNPUL2Q1KMD3 747 aaKnown RBP10.61□□□□□ -0.71
LMO3-205ENST00000396205 ZNF142P52746 1687 aaPredicted RBP10.61□□□□□ -0.71
LMO3-205ENST00000396205 CAMSAP2Q08AD1 1489 aa10.61□□□□□ -0.71
LMO3-205ENST00000396205 CCDC141Q6ZP82 1450 aa10.6□□□□□ -0.71
LMO3-205ENST00000396205 CNTLNQ9NXG0 1405 aa10.6□□□□□ -0.71
LMO3-205ENST00000396205 TRAPPC8Q9Y2L5 1435 aa10.6□□□□□ -0.71
LMO3-205ENST00000396205 CCNB3Q8WWL7 1395 aa10.6□□□□□ -0.71
LMO3-205ENST00000396205 RSPH4AQ5TD94 716 aa10.59□□□□□ -0.71
LMO3-205ENST00000396205 C3P01024 1663 aa10.59□□□□□ -0.71
LMO3-205ENST00000396205 DNMT1P26358 1616 aaKnown RBP10.58□□□□□ -0.72
LMO3-205ENST00000396205 MYOM3Q5VTT5 1437 aa10.58□□□□□ -0.72
LMO3-205ENST00000396205 KDM5DQ9BY66 1539 aa10.58□□□□□ -0.72
LMO3-205ENST00000396205 DEPDC5O75140 1603 aa10.57□□□□□ -0.72
LMO3-205ENST00000396205 RAPGEF3O95398 923 aa10.57□□□□□ -0.72
LMO3-205ENST00000396205 PPP6R1Q9UPN7 881 aa10.56□□□□□ -0.72
LMO3-205ENST00000396205 NPATQ14207 1427 aa10.56□□□□□ -0.72
LMO3-205ENST00000396205 ARID3CA6NKF2 412 aa10.55□□□□□ -0.72
LMO3-205ENST00000396205 PTPN23Q9H3S7 1636 aa10.55□□□□□ -0.72
LMO3-205ENST00000396205 A2MP01023 1474 aa10.55□□□□□ -0.72
LMO3-205ENST00000396205 AEBP2Q6ZN18 517 aaPredicted RBP10.54□□□□□ -0.72
LMO3-205ENST00000396205 RANGAP1P46060 587 aaPredicted RBP10.54□□□□□ -0.72
LMO3-205ENST00000396205 LMTK3Q96Q04 1460 aa10.54□□□□□ -0.72
LMO3-205ENST00000396205 ADGRL2O95490 1459 aa10.52□□□□□ -0.72
LMO3-205ENST00000396205 KDM5AP29375 1690 aaKnown RBP10.52□□□□□ -0.72
LMO3-205ENST00000396205 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.52□□□□□ -0.73
LMO3-205ENST00000396205 PRDM15P57071 1507 aaPredicted RBP10.52□□□□□ -0.73
LMO3-205ENST00000396205 SETD1BQ9UPS6 1966 aaKnown RBP10.52□□□□□ -0.73
LMO3-205ENST00000396205 MROH1Q8NDA8 1641 aa10.51□□□□□ -0.73
LMO3-205ENST00000396205 DUOX2Q9NRD8 1548 aa10.51□□□□□ -0.73
LMO3-205ENST00000396205 CLTCQ00610 1675 aaKnown RBP10.5□□□□□ -0.73
LMO3-205ENST00000396205 CFDP1Q9UEE9 299 aaPredicted RBP10.5□□□□□ -0.73
LMO3-205ENST00000396205 VWDEQ8N2E2 1590 aa10.5□□□□□ -0.73
LMO3-205ENST00000396205 ERBINQ96RT1 1412 aa10.5□□□□□ -0.73
LMO3-205ENST00000396205 MYO3AQ8NEV4 1616 aa10.49□□□□□ -0.73
LMO3-205ENST00000396205 DHX29Q7Z478 1369 aaKnown RBP10.49□□□□□ -0.73
LMO3-205ENST00000396205 LMTK2Q8IWU2 1503 aa10.49□□□□□ -0.73
LMO3-205ENST00000396205 FGD6Q6ZV73 1430 aa10.48□□□□□ -0.73
LMO3-205ENST00000396205 SPAG9O60271 1321 aaKnown RBP10.47□□□□□ -0.73
LMO3-205ENST00000396205 AFAP1Q8N556 730 aa10.46□□□□□ -0.73
LMO3-205ENST00000396205 ATP1B4Q9UN42 357 aaPredicted RBP10.46□□□□□ -0.73
LMO3-205ENST00000396205 SPATA31D1Q6ZQQ2 1576 aa10.45□□□□□ -0.74
LMO3-205ENST00000396205 CAMSAP1Q5T5Y3 1602 aa10.45□□□□□ -0.74
LMO3-205ENST00000396205 PZPP20742 1482 aa10.45□□□□□ -0.74
LMO3-205ENST00000396205 PLA2R1Q13018 1463 aa10.45□□□□□ -0.74
LMO3-205ENST00000396205 STRCQ7RTU9 1775 aa10.45□□□□□ -0.74
LMO3-205ENST00000396205 UNC13BO14795 1591 aa10.45□□□□□ -0.74
LMO3-205ENST00000396205 DAPK1P53355 1430 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms