RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 EHBP1L1Q8N3D4 1523 aa21.58■■□□□ 1.05
RTFDC1-203ENST00000395881 PLCH2O75038 1416 aa21.57■■□□□ 1.04
RTFDC1-203ENST00000395881 MYO5CQ9NQX4 1742 aa21.56■■□□□ 1.04
RTFDC1-203ENST00000395881 FANCAO15360 1455 aa21.55■■□□□ 1.04
RTFDC1-203ENST00000395881 MTUS2Q5JR59 1369 aa21.54■■□□□ 1.04
RTFDC1-203ENST00000395881 SUPT6HQ7KZ85 1726 aaKnown RBP21.53■■□□□ 1.04
RTFDC1-203ENST00000395881 AKNAQ7Z591 1439 aa21.53■■□□□ 1.04
RTFDC1-203ENST00000395881 CFAP74Q9C0B2 1584 aa21.53■■□□□ 1.04
RTFDC1-203ENST00000395881 RAPGEF3O95398 923 aa21.51■■□□□ 1.03
RTFDC1-203ENST00000395881 CLSPNQ9HAW4 1339 aa21.5■■□□□ 1.03
RTFDC1-203ENST00000395881 CDC42BPBQ9Y5S2 1711 aa21.49■■□□□ 1.03
RTFDC1-203ENST00000395881 FRMPD1Q5SYB0 1578 aa21.49■■□□□ 1.03
RTFDC1-203ENST00000395881 CDC42BPAQ5VT25 1732 aa21.47■■□□□ 1.03
RTFDC1-203ENST00000395881 EFCAB2Q5VUJ9 269 aa21.47■■□□□ 1.03
RTFDC1-203ENST00000395881 RICTORQ6R327 1708 aa21.46■■□□□ 1.03
RTFDC1-203ENST00000395881 NCOA2Q15596 1464 aa21.46■■□□□ 1.03
RTFDC1-203ENST00000395881 FGD6Q6ZV73 1430 aa21.46■■□□□ 1.03
RTFDC1-203ENST00000395881 PREX2Q70Z35 1606 aa21.46■■□□□ 1.03
RTFDC1-203ENST00000395881 DENND4BO75064 1496 aaPredicted RBP21.45■■□□□ 1.03
RTFDC1-203ENST00000395881 AEBP2Q6ZN18 517 aaPredicted RBP21.45■■□□□ 1.02
RTFDC1-203ENST00000395881 ARHGAP5Q13017 1502 aa21.45■■□□□ 1.02
RTFDC1-203ENST00000395881 ADGRL1O94910 1474 aa21.43■■□□□ 1.02
RTFDC1-203ENST00000395881 MYOM3Q5VTT5 1437 aa21.43■■□□□ 1.02
RTFDC1-203ENST00000395881 SCAPERQ9BY12 1400 aa21.43■■□□□ 1.02
RTFDC1-203ENST00000395881 GPATCH8Q9UKJ3 1502 aaKnown RBP21.41■■□□□ 1.02
RTFDC1-203ENST00000395881 POGZQ7Z3K3 1410 aa21.37■■□□□ 1.01
RTFDC1-203ENST00000395881 DHX57Q6P158 1386 aaKnown RBP21.37■■□□□ 1.01
RTFDC1-203ENST00000395881 KDM4FA0A1W2PPD8 638 aa21.36■■□□□ 1.01
RTFDC1-203ENST00000395881 ZMYM4Q5VZL5 1548 aa21.35■■□□□ 1.01
RTFDC1-203ENST00000395881 SETD5Q9C0A6 1442 aa21.35■■□□□ 1.01
RTFDC1-203ENST00000395881 FAM50AQ14320 339 aaKnown RBP21.35■■□□□ 1.01
RTFDC1-203ENST00000395881 ARHGEF12Q9NZN5 1544 aa21.34■■□□□ 1.01
RTFDC1-203ENST00000395881 MIA2Q96PC5 1412 aa21.34■■□□□ 1.01
RTFDC1-203ENST00000395881 TCOF1Q13428 1488 aaKnown RBP21.34■■□□□ 1.01
RTFDC1-203ENST00000395881 ABCC1P33527 1531 aa21.33■■□□□ 1.01
RTFDC1-203ENST00000395881 SAMD9LQ8IVG5 1584 aa21.32■■□□□ 1
RTFDC1-203ENST00000395881 PTPN23Q9H3S7 1636 aa21.32■■□□□ 1
RTFDC1-203ENST00000395881 AFAP1Q8N556 730 aa21.31■■□□□ 1
RTFDC1-203ENST00000395881 ZNF777Q9ULD5 760 aaPredicted RBP21.31■■□□□ 1
RTFDC1-203ENST00000395881 ITSN2Q9NZM3 1697 aa21.31■■□□□ 1
RTFDC1-203ENST00000395881 CFDP1Q9UEE9 299 aaPredicted RBP21.31■■□□□ 1
RTFDC1-203ENST00000395881 ARHGEF40Q8TER5 1519 aa21.31■■□□□ 1
RTFDC1-203ENST00000395881 RAB3GAP2Q9H2M9 1393 aa21.3■■□□□ 1
RTFDC1-203ENST00000395881 YEATS2Q9ULM3 1422 aa21.29■■□□□ 1
RTFDC1-203ENST00000395881 TRAPPC8Q9Y2L5 1435 aa21.29■■□□□ 1
RTFDC1-203ENST00000395881 ZNF518AQ6AHZ1 1483 aa21.29■■□□□ 1
RTFDC1-203ENST00000395881 MAGI2Q86UL8 1455 aa21.29■■□□□ 1
RTFDC1-203ENST00000395881 KDM5CP41229 1560 aa21.29■■□□□ 1
RTFDC1-203ENST00000395881 ITGAEP38570 1179 aa21.28■■□□□ 1
RTFDC1-203ENST00000395881 ZFYVE16Q7Z3T8 1539 aa21.28■■□□□ 1
RTFDC1-203ENST00000395881 SYCP2Q9BX26 1530 aa21.25■□□□□ 0.99
RTFDC1-203ENST00000395881 ZNF644Q9H582 1327 aaPredicted RBP21.24■□□□□ 0.99
RTFDC1-203ENST00000395881 HNRNPMP52272 730 aaKnown RBP eCLIP21.24■□□□□ 0.99
RTFDC1-203ENST00000395881 HFM1A2PYH4 1435 aa21.23■□□□□ 0.99
RTFDC1-203ENST00000395881 KIAA1107Q9UPP5 1409 aa21.23■□□□□ 0.99
RTFDC1-203ENST00000395881 SIGLEC1Q9BZZ2 1709 aa21.23■□□□□ 0.99
RTFDC1-203ENST00000395881 HECW2Q9P2P5 1572 aa21.22■□□□□ 0.99
RTFDC1-203ENST00000395881 PLEKHH2Q8IVE3 1493 aa21.22■□□□□ 0.99
RTFDC1-203ENST00000395881 MLH3Q9UHC1 1453 aa21.21■□□□□ 0.99
RTFDC1-203ENST00000395881 ATP10AO60312 1499 aa21.19■□□□□ 0.98
RTFDC1-203ENST00000395881 KIDINS220Q9ULH0 1771 aa21.18■□□□□ 0.98
RTFDC1-203ENST00000395881 ARID4BQ4LE39 1312 aaPredicted RBP21.17■□□□□ 0.98
RTFDC1-203ENST00000395881 PTPRKQ15262 1439 aa21.17■□□□□ 0.98
RTFDC1-203ENST00000395881 BCORL1Q5H9F3 1711 aa21.17■□□□□ 0.98
RTFDC1-203ENST00000395881 MYT1LQ9UL68 1186 aa21.17■□□□□ 0.98
RTFDC1-203ENST00000395881 MBD5Q9P267 1494 aa21.17■□□□□ 0.98
RTFDC1-203ENST00000395881 DIP2CQ9Y2E4 1556 aa21.17■□□□□ 0.98
RTFDC1-203ENST00000395881 ABCA6Q8N139 1617 aa21.16■□□□□ 0.98
RTFDC1-203ENST00000395881 ADAMTSL3P82987 1691 aa21.16■□□□□ 0.98
RTFDC1-203ENST00000395881 CAMSAP2Q08AD1 1489 aa21.15■□□□□ 0.98
RTFDC1-203ENST00000395881 C9orf84Q5VXU9 1444 aa21.14■□□□□ 0.98
RTFDC1-203ENST00000395881 SPAG9O60271 1321 aaKnown RBP21.13■□□□□ 0.97
RTFDC1-203ENST00000395881 GCC2Q8IWJ2 1684 aa21.12■□□□□ 0.97
RTFDC1-203ENST00000395881 NAIPQ13075 1403 aa21.12■□□□□ 0.97
RTFDC1-203ENST00000395881 ACIN1Q9UKV3 1341 aaKnown RBP21.12■□□□□ 0.97
RTFDC1-203ENST00000395881 INO80Q9ULG1 1556 aaPredicted RBP21.1■□□□□ 0.97
RTFDC1-203ENST00000395881 DNMT1P26358 1616 aaKnown RBP21.1■□□□□ 0.97
RTFDC1-203ENST00000395881 ATP7AQ04656 1500 aa21.1■□□□□ 0.97
RTFDC1-203ENST00000395881 REREQ9P2R6 1566 aa21.1■□□□□ 0.97
RTFDC1-203ENST00000395881 MADDQ8WXG6 1647 aa21.08■□□□□ 0.97
RTFDC1-203ENST00000395881 ROCK1Q13464 1354 aa21.07■□□□□ 0.96
RTFDC1-203ENST00000395881 MLECQ14165 292 aa21.06■□□□□ 0.96
RTFDC1-203ENST00000395881 CCDC141Q6ZP82 1450 aa21.06■□□□□ 0.96
RTFDC1-203ENST00000395881 ARHGEF5Q12774 1597 aa21.06■□□□□ 0.96
RTFDC1-203ENST00000395881 RSPH4AQ5TD94 716 aa21.05■□□□□ 0.96
RTFDC1-203ENST00000395881 DAPK1P53355 1430 aa21.04■□□□□ 0.96
RTFDC1-203ENST00000395881 AGLP35573 1532 aa21.04■□□□□ 0.96
RTFDC1-203ENST00000395881 ZNF316A6NFI3 1004 aaPredicted RBP21.03■□□□□ 0.96
RTFDC1-203ENST00000395881 TIMELESSQ9UNS1 1208 aa21.03■□□□□ 0.96
RTFDC1-203ENST00000395881 RIMS1Q86UR5 1692 aaKnown RBP21.03■□□□□ 0.96
RTFDC1-203ENST00000395881 PTPRMP28827 1452 aa21.03■□□□□ 0.96
RTFDC1-203ENST00000395881 RTEL1-TNFRSF6BF6WH68 1400 aa21.03■□□□□ 0.96
RTFDC1-203ENST00000395881 ABCC5O15440 1437 aa21.01■□□□□ 0.95
RTFDC1-203ENST00000395881 FER1L4A9Z1Z3 1794 aa21■□□□□ 0.95
RTFDC1-203ENST00000395881 ADGBQ8N7X0 1667 aa21■□□□□ 0.95
RTFDC1-203ENST00000395881 A2MP01023 1474 aa20.99■□□□□ 0.95
RTFDC1-203ENST00000395881 PLXNC1O60486 1568 aa20.98■□□□□ 0.95
RTFDC1-203ENST00000395881 TSPY4P0CV99 314 aa20.97■□□□□ 0.95
RTFDC1-203ENST00000395881 TSPY10P0CW01 314 aa20.97■□□□□ 0.95
RTFDC1-203ENST00000395881 CROCC2H7BZ55 1655 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms