RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 EXOC8Q8IYI6 725 aa5.91□□□□□ -1.46
HERC4-204ENST00000395198 GPBP1L1Q9HC44 474 aaPredicted RBP5.91□□□□□ -1.46
HERC4-204ENST00000395198 ECM2O94769 699 aaPredicted RBP5.91□□□□□ -1.46
HERC4-204ENST00000395198 GPATCH11Q8N954 259 aa5.91□□□□□ -1.46
HERC4-204ENST00000395198 SLC52A1Q9NWF4 448 aa5.9□□□□□ -1.46
HERC4-204ENST00000395198 FTSJ3Q8IY81 847 aaKnown RBP5.9□□□□□ -1.47
HERC4-204ENST00000395198 FOXD4L6Q3SYB3 417 aaPredicted RBP5.89□□□□□ -1.47
HERC4-204ENST00000395198 FOXD4L3Q6VB84 417 aaPredicted RBP5.89□□□□□ -1.47
HERC4-204ENST00000395198 OS9Q13438 667 aaPredicted RBP5.89□□□□□ -1.47
HERC4-204ENST00000395198 RETREG2Q8NC44 543 aa5.89□□□□□ -1.47
HERC4-204ENST00000395198 SIRT1Q96EB6 747 aa5.89□□□□□ -1.47
HERC4-204ENST00000395198 FOXD1Q16676 465 aa5.88□□□□□ -1.47
HERC4-204ENST00000395198 IL27Q8NEV9 243 aa5.88□□□□□ -1.47
HERC4-204ENST00000395198 MYT1LQ9UL68 1186 aa5.88□□□□□ -1.47
HERC4-204ENST00000395198 PLEKHD1A6NEE1 506 aa5.88□□□□□ -1.47
HERC4-204ENST00000395198 FAM9BQ8IZU0 186 aa5.88□□□□□ -1.47
HERC4-204ENST00000395198 GTF2E1P29083 439 aaPredicted RBP5.87□□□□□ -1.47
HERC4-204ENST00000395198 EVI5LQ96CN4 794 aa5.87□□□□□ -1.47
HERC4-204ENST00000395198 HSP90AB4PQ58FF6 505 aa5.87□□□□□ -1.47
HERC4-204ENST00000395198 CHGAP10645 457 aaKnown RBP5.86□□□□□ -1.47
HERC4-204ENST00000395198 CLUAP1Q96AJ1 413 aa5.86□□□□□ -1.47
HERC4-204ENST00000395198 BARGINQ6ZT62 677 aa5.86□□□□□ -1.47
HERC4-204ENST00000395198 PTMSP20962 102 aa5.85□□□□□ -1.47
HERC4-204ENST00000395198 MARCH6O60337 910 aa5.85□□□□□ -1.47
HERC4-204ENST00000395198 SPATA32Q96LK8 384 aa5.85□□□□□ -1.47
HERC4-204ENST00000395198 SUGT1Q9Y2Z0 365 aa5.85□□□□□ -1.47
HERC4-204ENST00000395198 ZC3H4Q9UPT8 1303 aaKnown RBP5.84□□□□□ -1.47
HERC4-204ENST00000395198 NME8Q8N427 588 aa5.84□□□□□ -1.47
HERC4-204ENST00000395198 NKX1-1Q15270 411 aaPredicted RBP5.84□□□□□ -1.47
HERC4-204ENST00000395198 CDCA8Q53HL2 280 aa5.83□□□□□ -1.48
HERC4-204ENST00000395198 SPTY2D1Q68D10 685 aaPredicted RBP5.83□□□□□ -1.48
HERC4-204ENST00000395198 NOL8Q76FK4 1167 aaKnown RBP5.83□□□□□ -1.48
HERC4-204ENST00000395198 PPME1Q9Y570 386 aa5.83□□□□□ -1.48
HERC4-204ENST00000395198 ZNF662Q6ZS27 426 aa5.82□□□□□ -1.48
HERC4-204ENST00000395198 HS6ST3Q8IZP7 471 aa5.82□□□□□ -1.48
HERC4-204ENST00000395198 ONECUT3O60422 494 aaPredicted RBP5.82□□□□□ -1.48
HERC4-204ENST00000395198 ATXN8OSP0DMR3 200 aa5.82□□□□□ -1.48
HERC4-204ENST00000395198 FAM193AP78312 1265 aa5.82□□□□□ -1.48
HERC4-204ENST00000395198 SPINK5Q9NQ38 1064 aaPredicted RBP5.82□□□□□ -1.48
HERC4-204ENST00000395198 RPS6KL1Q9Y6S9 549 aa5.82□□□□□ -1.48
HERC4-204ENST00000395198 TRAK2O60296 914 aa5.81□□□□□ -1.48
HERC4-204ENST00000395198 FBXW7Q969H0 707 aa5.81□□□□□ -1.48
HERC4-204ENST00000395198 SLC4A2P04920 1241 aa5.81□□□□□ -1.48
HERC4-204ENST00000395198 ARIH1Q9Y4X5 557 aaPredicted RBP5.81□□□□□ -1.48
HERC4-204ENST00000395198 GLIPR1L2Q4G1C9 344 aa5.81□□□□□ -1.48
HERC4-204ENST00000395198 KCNV2Q8TDN2 545 aa5.8□□□□□ -1.48
HERC4-204ENST00000395198 DCAF1Q9Y4B6 1507 aa5.8□□□□□ -1.48
HERC4-204ENST00000395198 APBB1IPQ7Z5R6 666 aaPredicted RBP5.8□□□□□ -1.48
HERC4-204ENST00000395198 TESPA1A2RU30 521 aaPredicted RBP5.8□□□□□ -1.48
HERC4-204ENST00000395198 PTMAP06454 111 aaKnown RBP5.79□□□□□ -1.48
HERC4-204ENST00000395198 STK24Q9Y6E0 443 aa5.79□□□□□ -1.48
HERC4-204ENST00000395198 RIOK3O14730 519 aaKnown RBP5.79□□□□□ -1.48
HERC4-204ENST00000395198 TPD52L2O43399 206 aaKnown RBP5.79□□□□□ -1.48
HERC4-204ENST00000395198 DNAJC5BQ9UF47 199 aa5.79□□□□□ -1.48
HERC4-204ENST00000395198 STAC3Q96MF2 364 aa5.78□□□□□ -1.48
HERC4-204ENST00000395198 WDR70Q9NW82 654 aa5.78□□□□□ -1.48
HERC4-204ENST00000395198 UNC13AQ9UPW8 1703 aa5.78□□□□□ -1.48
HERC4-204ENST00000395198 ATF5Q9Y2D1 282 aaPredicted RBP5.78□□□□□ -1.48
HERC4-204ENST00000395198 PATL2C9JE40 543 aaKnown RBP5.78□□□□□ -1.48
HERC4-204ENST00000395198 PROM2Q8N271 834 aa5.78□□□□□ -1.48
HERC4-204ENST00000395198 TERF2IPQ9NYB0 399 aa5.78□□□□□ -1.48
HERC4-204ENST00000395198 RBM27Q9P2N5 1060 aaKnown RBP5.78□□□□□ -1.48
HERC4-204ENST00000395198 ANKRD13AQ8IZ07 590 aa5.77□□□□□ -1.49
HERC4-204ENST00000395198 KIAA1522Q9P206 1035 aaPredicted RBP5.77□□□□□ -1.49
HERC4-204ENST00000395198 AMOTL2Q9Y2J4 779 aa5.77□□□□□ -1.49
HERC4-204ENST00000395198 NEFMP07197 916 aa5.77□□□□□ -1.49
HERC4-204ENST00000395198 SOX12O15370 315 aa5.76□□□□□ -1.49
HERC4-204ENST00000395198 ZMYND10O75800 440 aa5.76□□□□□ -1.49
HERC4-204ENST00000395198 GTPBP6O43824 516 aaPredicted RBP5.76□□□□□ -1.49
HERC4-204ENST00000395198 PPFIA4O75335 1185 aa5.75□□□□□ -1.49
HERC4-204ENST00000395198 MICAL1Q8TDZ2 1067 aa5.75□□□□□ -1.49
HERC4-204ENST00000395198 ZNF777Q9ULD5 760 aaPredicted RBP5.75□□□□□ -1.49
HERC4-204ENST00000395198 MYH16Q9H6N6 1097 aa5.75□□□□□ -1.49
HERC4-204ENST00000395198 FOXD4Q12950 439 aaPredicted RBP5.75□□□□□ -1.49
HERC4-204ENST00000395198 GIMAP6Q6P9H5 292 aa5.74□□□□□ -1.49
HERC4-204ENST00000395198 FAM117AQ9C073 453 aa5.74□□□□□ -1.49
HERC4-204ENST00000395198 RAB11FIP3O75154 756 aa5.74□□□□□ -1.49
HERC4-204ENST00000395198 SENP3Q9H4L4 574 aaPredicted RBP5.74□□□□□ -1.49
HERC4-204ENST00000395198 KDM4CQ9H3R0 1056 aa5.74□□□□□ -1.49
HERC4-204ENST00000395198 PHF14O94880 888 aa5.73□□□□□ -1.49
HERC4-204ENST00000395198 HIRIP3Q9BW71 556 aaPredicted RBP5.73□□□□□ -1.49
HERC4-204ENST00000395198 MAP4K4O95819 1239 aaPredicted RBP5.73□□□□□ -1.49
HERC4-204ENST00000395198 MAMSTRQ6ZN01 415 aa5.73□□□□□ -1.49
HERC4-204ENST00000395198 RINLQ6ZS11 566 aa5.73□□□□□ -1.49
HERC4-204ENST00000395198 ANKRD62A6NC57 917 aa5.72□□□□□ -1.49
HERC4-204ENST00000395198 MMP14P50281 582 aa5.72□□□□□ -1.49
HERC4-204ENST00000395198 SH3BP1Q9Y3L3 701 aa5.72□□□□□ -1.49
HERC4-204ENST00000395198 ACIN1Q9UKV3 1341 aaKnown RBP5.72□□□□□ -1.49
HERC4-204ENST00000395198 PEX14O75381 377 aa5.72□□□□□ -1.49
HERC4-204ENST00000395198 A6NJR5 290 aa5.71□□□□□ -1.49
HERC4-204ENST00000395198 RALBP1Q15311 655 aa5.71□□□□□ -1.49
HERC4-204ENST00000395198 TSHZ1Q6ZSZ6 1077 aa5.71□□□□□ -1.49
HERC4-204ENST00000395198 GPATCH3Q96I76 525 aa5.71□□□□□ -1.5
HERC4-204ENST00000395198 FOSBP53539 338 aa5.71□□□□□ -1.5
HERC4-204ENST00000395198 CANXP27824 592 aaKnown RBP5.7□□□□□ -1.5
HERC4-204ENST00000395198 MYBPC2Q14324 1141 aa5.7□□□□□ -1.5
HERC4-204ENST00000395198 MTA3Q9BTC8 594 aa5.7□□□□□ -1.5
HERC4-204ENST00000395198 CCDC96Q2M329 555 aa5.69□□□□□ -1.5
HERC4-204ENST00000395198 DNAJC14Q6Y2X3 702 aaPredicted RBP5.69□□□□□ -1.5
HERC4-204ENST00000395198 CARNS1A5YM72 827 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms