RNA–Protein interactions for RNA: ENST00000393588.8

CASP3-203, Transcript of caspase 3, humanhuman

TSL 4 BASIC

Gene CASP3, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-203ENST00000393588 DOK7Q18PE1 504 aa13□□□□□ -0.33
CASP3-203ENST00000393588 KIF3CO14782 793 aa12.97□□□□□ -0.33
CASP3-203ENST00000393588 ZNF710Q8N1W2 664 aa12.97□□□□□ -0.33
CASP3-203ENST00000393588 PCDH10Q9P2E7 1040 aa12.96□□□□□ -0.33
CASP3-203ENST00000393588 C2orf72A6NCS6 295 aa12.95□□□□□ -0.34
CASP3-203ENST00000393588 MARVELD3Q96A59 401 aa12.95□□□□□ -0.34
CASP3-203ENST00000393588 RIMBP2O15034 1052 aa12.94□□□□□ -0.34
CASP3-203ENST00000393588 GTPBP6O43824 516 aaPredicted RBP12.94□□□□□ -0.34
CASP3-203ENST00000393588 TMC2Q8TDI7 906 aa12.94□□□□□ -0.34
CASP3-203ENST00000393588 EMP3P54852 163 aa12.91□□□□□ -0.34
CASP3-203ENST00000393588 ZSWIM6Q9HCJ5 1215 aa12.9□□□□□ -0.34
CASP3-203ENST00000393588 HOXB1P14653 301 aaPredicted RBP12.89□□□□□ -0.35
CASP3-203ENST00000393588 CDAN1Q8IWY9 1227 aa12.85□□□□□ -0.35
CASP3-203ENST00000393588 BBXQ8WY36 941 aaPredicted RBP12.85□□□□□ -0.35
CASP3-203ENST00000393588 GPHNQ9NQX3 736 aaPredicted RBP12.84□□□□□ -0.35
CASP3-203ENST00000393588 GPR153Q6NV75 609 aa12.83□□□□□ -0.36
CASP3-203ENST00000393588 FAM205CA6NFA0 338 aa12.81□□□□□ -0.36
CASP3-203ENST00000393588 SLC34A2O95436 690 aa12.8□□□□□ -0.36
CASP3-203ENST00000393588 FOXK1P85037 733 aa12.8□□□□□ -0.36
CASP3-203ENST00000393588 HS3ST6Q96QI5 342 aa12.8□□□□□ -0.36
CASP3-203ENST00000393588 ARSIQ5FYB1 569 aa12.79□□□□□ -0.36
CASP3-203ENST00000393588 POTEB3A0JP26 581 aa12.77□□□□□ -0.37
CASP3-203ENST00000393588 POTEBQ6S5H4 581 aa12.77□□□□□ -0.37
CASP3-203ENST00000393588 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
CASP3-203ENST00000393588 DSG2Q14126 1118 aa12.76□□□□□ -0.37
CASP3-203ENST00000393588 PLPP6Q8IY26 295 aa12.76□□□□□ -0.37
CASP3-203ENST00000393588 ERBB3P21860 1342 aa12.76□□□□□ -0.37
CASP3-203ENST00000393588 NCKAP5LQ9HCH0 1330 aa12.73□□□□□ -0.37
CASP3-203ENST00000393588 PDE4AP27815 886 aa12.73□□□□□ -0.37
CASP3-203ENST00000393588 KHSRPQ92945 711 aaKnown RBP eCLIP12.73□□□□□ -0.37
CASP3-203ENST00000393588 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.73□□□□□ -0.37
CASP3-203ENST00000393588 PCDHGA4Q9Y5G9 962 aa12.73□□□□□ -0.37
CASP3-203ENST00000393588 PLSCR2Q9NRY7 297 aa12.72□□□□□ -0.37
CASP3-203ENST00000393588 VARS2Q5ST30 1063 aaKnown RBP12.7□□□□□ -0.38
CASP3-203ENST00000393588 SPRYD3Q8NCJ5 442 aa12.69□□□□□ -0.38
CASP3-203ENST00000393588 PTCD2Q8WV60 388 aaKnown RBP12.69□□□□□ -0.38
CASP3-203ENST00000393588 PPP1R15BQ5SWA1 713 aa12.68□□□□□ -0.38
CASP3-203ENST00000393588 NUDT7P0C024 238 aa12.67□□□□□ -0.38
CASP3-203ENST00000393588 ZNF316A6NFI3 1004 aaPredicted RBP12.66□□□□□ -0.38
CASP3-203ENST00000393588 LARP6Q9BRS8 491 aaKnown RBP12.66□□□□□ -0.38
CASP3-203ENST00000393588 CADPS2Q86UW7 1296 aa12.65□□□□□ -0.38
CASP3-203ENST00000393588 DDX27Q96GQ7 796 aaKnown RBP12.64□□□□□ -0.39
CASP3-203ENST00000393588 KRTAP3-3Q9BYR6 98 aa12.63□□□□□ -0.39
CASP3-203ENST00000393588 KRTAP3-2Q9BYR7 98 aa12.63□□□□□ -0.39
CASP3-203ENST00000393588 TBC1D12O60347 775 aa12.62□□□□□ -0.39
CASP3-203ENST00000393588 MFSD10Q14728 455 aa12.62□□□□□ -0.39
CASP3-203ENST00000393588 PAXIP1Q6ZW49 1069 aaPredicted RBP12.6□□□□□ -0.39
CASP3-203ENST00000393588 ZNF687Q8N1G0 1237 aa12.6□□□□□ -0.39
CASP3-203ENST00000393588 OXER1Q8TDS5 423 aa12.6□□□□□ -0.39
CASP3-203ENST00000393588 LHX6Q9UPM6 363 aa12.6□□□□□ -0.39
CASP3-203ENST00000393588 KDM4FA0A1W2PPD8 638 aa12.59□□□□□ -0.39
CASP3-203ENST00000393588 CFAP44Q96MT7 982 aa12.59□□□□□ -0.39
CASP3-203ENST00000393588 UPF1Q92900 1129 aaKnown RBP eCLIP12.57□□□□□ -0.4
CASP3-203ENST00000393588 PSDA5PKW4 1024 aaPredicted RBP12.54□□□□□ -0.4
CASP3-203ENST00000393588 SPNS2Q8IVW8 549 aa12.54□□□□□ -0.4
CASP3-203ENST00000393588 EMILIN3Q9NT22 766 aa12.48□□□□□ -0.41
CASP3-203ENST00000393588 PBX2P40425 430 aa12.47□□□□□ -0.41
CASP3-203ENST00000393588 MAP3K9P80192 1104 aa12.45□□□□□ -0.42
CASP3-203ENST00000393588 MMRN1Q13201 1228 aa12.45□□□□□ -0.42
CASP3-203ENST00000393588 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
CASP3-203ENST00000393588 PPP4R3BQ5MIZ7 849 aa12.44□□□□□ -0.42
CASP3-203ENST00000393588 ANO8Q9HCE9 1232 aaPredicted RBP12.44□□□□□ -0.42
CASP3-203ENST00000393588 EVI5O60447 810 aa12.43□□□□□ -0.42
CASP3-203ENST00000393588 POTEEQ6S8J3 1075 aa12.42□□□□□ -0.42
CASP3-203ENST00000393588 LSM11P83369 360 aaKnown RBP eCLIP12.41□□□□□ -0.42
CASP3-203ENST00000393588 AXIN2Q9Y2T1 843 aa12.41□□□□□ -0.42
CASP3-203ENST00000393588 ARHGAP33O14559 1287 aa12.39□□□□□ -0.43
CASP3-203ENST00000393588 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
CASP3-203ENST00000393588 ZNF454Q8N9F8 522 aa12.39□□□□□ -0.43
CASP3-203ENST00000393588 FOSBP53539 338 aa12.37□□□□□ -0.43
CASP3-203ENST00000393588 JPH4Q96JJ6 628 aa12.37□□□□□ -0.43
CASP3-203ENST00000393588 WDR70Q9NW82 654 aa12.36□□□□□ -0.43
CASP3-203ENST00000393588 DPYSL4O14531 572 aa12.35□□□□□ -0.43
CASP3-203ENST00000393588 TSHZ2Q9NRE2 1034 aa12.34□□□□□ -0.43
CASP3-203ENST00000393588 PTGER2P43116 358 aa12.33□□□□□ -0.44
CASP3-203ENST00000393588 E2F4Q16254 413 aa12.33□□□□□ -0.44
CASP3-203ENST00000393588 PSEN2P49810 448 aa12.32□□□□□ -0.44
CASP3-203ENST00000393588 KCNH8Q96L42 1107 aa12.31□□□□□ -0.44
CASP3-203ENST00000393588 KCNK17Q96T54 332 aa12.3□□□□□ -0.44
CASP3-203ENST00000393588 BCL2L12Q9HB09 334 aa12.3□□□□□ -0.44
CASP3-203ENST00000393588 DMRTA1Q5VZB9 504 aa12.29□□□□□ -0.44
CASP3-203ENST00000393588 ZDHHC16Q969W1 377 aa12.29□□□□□ -0.44
CASP3-203ENST00000393588 MYT1LQ9UL68 1186 aa12.29□□□□□ -0.44
CASP3-203ENST00000393588 ADGRD1Q6QNK2 874 aa12.28□□□□□ -0.44
CASP3-203ENST00000393588 TK2O00142 265 aa12.27□□□□□ -0.45
CASP3-203ENST00000393588 PCDHGA10Q9Y5H3 936 aa12.27□□□□□ -0.45
CASP3-203ENST00000393588 ARIH1Q9Y4X5 557 aaPredicted RBP12.26□□□□□ -0.45
CASP3-203ENST00000393588 PHF14O94880 888 aa12.25□□□□□ -0.45
CASP3-203ENST00000393588 PTPREP23469 700 aa12.25□□□□□ -0.45
CASP3-203ENST00000393588 PLCB2Q00722 1185 aa12.25□□□□□ -0.45
CASP3-203ENST00000393588 RNF166Q96A37 237 aaPredicted RBP12.25□□□□□ -0.45
CASP3-203ENST00000393588 ADAM33Q9BZ11 813 aa12.25□□□□□ -0.45
CASP3-203ENST00000393588 PDIA6Q15084 440 aa12.24□□□□□ -0.45
CASP3-203ENST00000393588 SPDYE16A6NNV3 312 aaPredicted RBP12.23□□□□□ -0.45
CASP3-203ENST00000393588 TYW1BQ6NUM6 668 aa12.23□□□□□ -0.45
CASP3-203ENST00000393588 FBXW7Q969H0 707 aa12.23□□□□□ -0.45
CASP3-203ENST00000393588 DDX12PQ92771 950 aa12.2□□□□□ -0.46
CASP3-203ENST00000393588 EPAS1Q99814 870 aa12.2□□□□□ -0.46
CASP3-203ENST00000393588 SLC4A5Q9BY07 1137 aa12.2□□□□□ -0.46
CASP3-203ENST00000393588 HRO43593 1189 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms