RNA–Protein interactions for RNA: ENST00000391248.1

RNU1-78P-201, Transcript of RNA, U1 small nuclear 78, pseudogene, humanhuman

BASIC

Gene RNU1-78P, Length 165 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-78P-201ENST00000391248 NCKAP5LQ9HCH0 1330 aa2.47□□□□□ -2.01
RNU1-78P-201ENST00000391248 MFAP1P55081 439 aaKnown RBP2.47□□□□□ -2.01
RNU1-78P-201ENST00000391248 POM121Q96HA1 1249 aa2.47□□□□□ -2.01
RNU1-78P-201ENST00000391248 ACIN1Q9UKV3 1341 aaKnown RBP2.46□□□□□ -2.02
RNU1-78P-201ENST00000391248 ONECUT3O60422 494 aaPredicted RBP2.46□□□□□ -2.02
RNU1-78P-201ENST00000391248 DSG3P32926 999 aa2.46□□□□□ -2.02
RNU1-78P-201ENST00000391248 TMCO4Q5TGY1 634 aa2.46□□□□□ -2.02
RNU1-78P-201ENST00000391248 PHF8Q9UPP1 1060 aa2.46□□□□□ -2.02
RNU1-78P-201ENST00000391248 E9PSI1 815 aa2.45□□□□□ -2.02
RNU1-78P-201ENST00000391248 IRF6O14896 467 aa2.45□□□□□ -2.02
RNU1-78P-201ENST00000391248 PRR29P0C7W0 189 aa2.45□□□□□ -2.02
RNU1-78P-201ENST00000391248 PSEN1P49768 467 aa2.45□□□□□ -2.02
RNU1-78P-201ENST00000391248 FNBP4Q8N3X1 1017 aaPredicted RBP2.45□□□□□ -2.02
RNU1-78P-201ENST00000391248 EFCAB3Q8N7B9 438 aa2.45□□□□□ -2.02
RNU1-78P-201ENST00000391248 PROCA1Q8NCQ7 364 aaPredicted RBP2.45□□□□□ -2.02
RNU1-78P-201ENST00000391248 FBXO22Q8NEZ5 403 aa2.45□□□□□ -2.02
RNU1-78P-201ENST00000391248 DDRGK1Q96HY6 314 aa2.45□□□□□ -2.02
RNU1-78P-201ENST00000391248 TSPYL2Q9H2G4 693 aaPredicted RBP2.45□□□□□ -2.02
RNU1-78P-201ENST00000391248 RNF39Q9H2S5 420 aa2.45□□□□□ -2.02
RNU1-78P-201ENST00000391248 SERPINA10Q9UK55 444 aa2.45□□□□□ -2.02
RNU1-78P-201ENST00000391248 ATP1B4Q9UN42 357 aaPredicted RBP2.45□□□□□ -2.02
RNU1-78P-201ENST00000391248 MINK1Q8N4C8 1332 aaPredicted RBP2.44□□□□□ -2.02
RNU1-78P-201ENST00000391248 FECHP22830 423 aa2.44□□□□□ -2.02
RNU1-78P-201ENST00000391248 NLRP6P59044 892 aa2.44□□□□□ -2.02
RNU1-78P-201ENST00000391248 PDAP1Q13442 181 aaKnown RBP2.44□□□□□ -2.02
RNU1-78P-201ENST00000391248 RETREG2Q8NC44 543 aa2.44□□□□□ -2.02
RNU1-78P-201ENST00000391248 PCMTD1Q96MG8 357 aaPredicted RBP2.44□□□□□ -2.02
RNU1-78P-201ENST00000391248 CLEC11AQ9Y240 323 aa2.44□□□□□ -2.02
RNU1-78P-201ENST00000391248 ARIH1Q9Y4X5 557 aaPredicted RBP2.44□□□□□ -2.02
RNU1-78P-201ENST00000391248 NUTM2FA1L443 756 aa2.43□□□□□ -2.02
RNU1-78P-201ENST00000391248 CARNS1A5YM72 827 aa2.43□□□□□ -2.02
RNU1-78P-201ENST00000391248 EIF5BO60841 1220 aaKnown RBP2.43□□□□□ -2.02
RNU1-78P-201ENST00000391248 CAMK2BQ13554 666 aa2.43□□□□□ -2.02
RNU1-78P-201ENST00000391248 PROSER2Q86WR7 435 aaPredicted RBP2.43□□□□□ -2.02
RNU1-78P-201ENST00000391248 PARP9Q8IXQ6 854 aa2.43□□□□□ -2.02
RNU1-78P-201ENST00000391248 FBXW7Q969H0 707 aa2.43□□□□□ -2.02
RNU1-78P-201ENST00000391248 CCDC97Q96F63 343 aaPredicted RBP2.43□□□□□ -2.02
RNU1-78P-201ENST00000391248 DDX27Q96GQ7 796 aaKnown RBP2.43□□□□□ -2.02
RNU1-78P-201ENST00000391248 USP35Q9P2H5 1018 aa2.43□□□□□ -2.02
RNU1-78P-201ENST00000391248 DPYSL4O14531 572 aa2.42□□□□□ -2.02
RNU1-78P-201ENST00000391248 SOX12O15370 315 aa2.42□□□□□ -2.02
RNU1-78P-201ENST00000391248 MS4A1P11836 297 aa2.42□□□□□ -2.02
RNU1-78P-201ENST00000391248 MFSD10Q14728 455 aa2.42□□□□□ -2.02
RNU1-78P-201ENST00000391248 ZNF467Q7Z7K2 595 aaPredicted RBP2.42□□□□□ -2.02
RNU1-78P-201ENST00000391248 CCDC102AQ96A19 550 aa2.42□□□□□ -2.02
RNU1-78P-201ENST00000391248 REPIN1Q9BWE0 567 aaKnown RBP2.42□□□□□ -2.02
RNU1-78P-201ENST00000391248 GOPCQ9HD26 462 aa2.42□□□□□ -2.02
RNU1-78P-201ENST00000391248 CABP2Q9NPB3 220 aa2.42□□□□□ -2.02
RNU1-78P-201ENST00000391248 SNRKQ9NRH2 765 aa2.42□□□□□ -2.02
RNU1-78P-201ENST00000391248 POLR3EQ9NVU0 708 aa2.42□□□□□ -2.02
RNU1-78P-201ENST00000391248 ZNF330Q9Y3S2 320 aaPredicted RBP2.42□□□□□ -2.02
RNU1-78P-201ENST00000391248 GRXCR2A6NFK2 248 aa2.41□□□□□ -2.02
RNU1-78P-201ENST00000391248 GPR37O15354 613 aa2.41□□□□□ -2.02
RNU1-78P-201ENST00000391248 C1QBPQ07021 282 aaKnown RBP2.41□□□□□ -2.02
RNU1-78P-201ENST00000391248 MCM6Q14566 821 aa2.41□□□□□ -2.02
RNU1-78P-201ENST00000391248 AMHR2Q16671 573 aa2.41□□□□□ -2.02
RNU1-78P-201ENST00000391248 MS4A4AQ96JQ5 239 aa2.41□□□□□ -2.02
RNU1-78P-201ENST00000391248 PUS7Q96PZ0 661 aaKnown RBP2.41□□□□□ -2.02
RNU1-78P-201ENST00000391248 CRISPLD2Q9H0B8 497 aa2.41□□□□□ -2.02
RNU1-78P-201ENST00000391248 PLSCR2Q9NRY7 297 aa2.41□□□□□ -2.02
RNU1-78P-201ENST00000391248 HMGB1P09429 215 aaKnown RBP2.4□□□□□ -2.03
RNU1-78P-201ENST00000391248 CDK11BP21127 795 aaKnown RBP2.4□□□□□ -2.03
RNU1-78P-201ENST00000391248 RFX1P22670 979 aa2.4□□□□□ -2.03
RNU1-78P-201ENST00000391248 MYT1Q01538 1121 aa2.4□□□□□ -2.03
RNU1-78P-201ENST00000391248 MAP2K5Q13163 448 aa2.4□□□□□ -2.03
RNU1-78P-201ENST00000391248 SKIV2LQ15477 1246 aaKnown RBP2.4□□□□□ -2.03
RNU1-78P-201ENST00000391248 SPDYE1Q8NFV5 336 aaPredicted RBP2.4□□□□□ -2.03
RNU1-78P-201ENST00000391248 EMILIN3Q9NT22 766 aa2.4□□□□□ -2.03
RNU1-78P-201ENST00000391248 CDK11AQ9UQ88 783 aaPredicted RBP2.4□□□□□ -2.03
RNU1-78P-201ENST00000391248 COG6Q9Y2V7 657 aa2.4□□□□□ -2.03
RNU1-78P-201ENST00000391248 TTBK1Q5TCY1 1321 aaPredicted RBP2.4□□□□□ -2.03
RNU1-78P-201ENST00000391248 GNPATO15228 680 aa2.39□□□□□ -2.03
RNU1-78P-201ENST00000391248 HSP90B1P14625 803 aaKnown RBP2.39□□□□□ -2.03
RNU1-78P-201ENST00000391248 SSTR3P32745 418 aaPredicted RBP2.39□□□□□ -2.03
RNU1-78P-201ENST00000391248 TTLL12Q14166 644 aaPredicted RBP2.39□□□□□ -2.03
RNU1-78P-201ENST00000391248 FBXO31Q5XUX0 539 aaPredicted RBP2.39□□□□□ -2.03
RNU1-78P-201ENST00000391248 OXER1Q8TDS5 423 aa2.39□□□□□ -2.03
RNU1-78P-201ENST00000391248 UNCXA6NJT0 531 aa2.38□□□□□ -2.03
RNU1-78P-201ENST00000391248 SPDYE16A6NNV3 312 aaPredicted RBP2.38□□□□□ -2.03
RNU1-78P-201ENST00000391248 OSBPP22059 807 aa2.38□□□□□ -2.03
RNU1-78P-201ENST00000391248 CDCA8Q53HL2 280 aa2.38□□□□□ -2.03
RNU1-78P-201ENST00000391248 GIGYF2Q6Y7W6 1299 aaKnown RBP2.38□□□□□ -2.03
RNU1-78P-201ENST00000391248 IFNL1Q8IU54 200 aa2.38□□□□□ -2.03
RNU1-78P-201ENST00000391248 FAM177A1Q8N128 213 aaPredicted RBP2.38□□□□□ -2.03
RNU1-78P-201ENST00000391248 ZNF579Q8NAF0 562 aaKnown RBP2.38□□□□□ -2.03
RNU1-78P-201ENST00000391248 CALR3Q96L12 384 aaKnown RBP2.38□□□□□ -2.03
RNU1-78P-201ENST00000391248 GDPD2Q9HCC8 539 aa2.38□□□□□ -2.03
RNU1-78P-201ENST00000391248 POM121CA8CG34 1229 aa2.37□□□□□ -2.03
RNU1-78P-201ENST00000391248 MAP3K13O43283 966 aa2.37□□□□□ -2.03
RNU1-78P-201ENST00000391248 PPP1R15AO75807 674 aaPredicted RBP2.37□□□□□ -2.03
RNU1-78P-201ENST00000391248 PDE4CQ08493 712 aa2.37□□□□□ -2.03
RNU1-78P-201ENST00000391248 SH3D19Q5HYK7 790 aa2.37□□□□□ -2.03
RNU1-78P-201ENST00000391248 PPP1R15BQ5SWA1 713 aa2.37□□□□□ -2.03
RNU1-78P-201ENST00000391248 HDGFL1Q5TGJ6 251 aa2.37□□□□□ -2.03
RNU1-78P-201ENST00000391248 CHADLQ6NUI6 762 aa2.37□□□□□ -2.03
RNU1-78P-201ENST00000391248 CHMP4AQ9BY43 222 aa2.37□□□□□ -2.03
RNU1-78P-201ENST00000391248 GPHNQ9NQX3 736 aaPredicted RBP2.37□□□□□ -2.03
RNU1-78P-201ENST00000391248 FCHSD2O94868 740 aa2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 BRD1O95696 1058 aa2.36□□□□□ -2.03
RNU1-78P-201ENST00000391248 ABL2P42684 1182 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms