RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 DNAJC5Q9H3Z4 198 aa3.82□□□□□ -1.8
SNORD28B-201ENST00000390993 PLSCR2Q9NRY7 297 aa3.81□□□□□ -1.8
SNORD28B-201ENST00000390993 ERBB3P21860 1342 aa3.8□□□□□ -1.8
SNORD28B-201ENST00000390993 TBC1D12O60347 775 aa3.8□□□□□ -1.8
SNORD28B-201ENST00000390993 CDAN1Q8IWY9 1227 aa3.8□□□□□ -1.8
SNORD28B-201ENST00000390993 MARVELD3Q96A59 401 aa3.8□□□□□ -1.8
SNORD28B-201ENST00000390993 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.8□□□□□ -1.8
SNORD28B-201ENST00000390993 C2orf72A6NCS6 295 aa3.79□□□□□ -1.8
SNORD28B-201ENST00000390993 FAM205CA6NFA0 338 aa3.79□□□□□ -1.8
SNORD28B-201ENST00000390993 HOXB1P14653 301 aaPredicted RBP3.79□□□□□ -1.8
SNORD28B-201ENST00000390993 ZNF316A6NFI3 1004 aaPredicted RBP3.78□□□□□ -1.8
SNORD28B-201ENST00000390993 HOXB3P14651 431 aaPredicted RBP3.78□□□□□ -1.8
SNORD28B-201ENST00000390993 LCE2DQ5TA82 110 aaPredicted RBP3.78□□□□□ -1.8
SNORD28B-201ENST00000390993 PSDA5PKW4 1024 aaPredicted RBP3.77□□□□□ -1.81
SNORD28B-201ENST00000390993 PPP1R37O75864 691 aa3.77□□□□□ -1.81
SNORD28B-201ENST00000390993 PDE4AP27815 886 aa3.77□□□□□ -1.81
SNORD28B-201ENST00000390993 TMEM92Q6UXU6 159 aa3.77□□□□□ -1.81
SNORD28B-201ENST00000390993 BBXQ8WY36 941 aaPredicted RBP3.77□□□□□ -1.81
SNORD28B-201ENST00000390993 HS3ST6Q96QI5 342 aa3.77□□□□□ -1.81
SNORD28B-201ENST00000390993 KIF3CO14782 793 aa3.76□□□□□ -1.81
SNORD28B-201ENST00000390993 SLC34A2O95436 690 aa3.76□□□□□ -1.81
SNORD28B-201ENST00000390993 ARSIQ5FYB1 569 aa3.76□□□□□ -1.81
SNORD28B-201ENST00000390993 GPHNQ9NQX3 736 aaPredicted RBP3.76□□□□□ -1.81
SNORD28B-201ENST00000390993 FOXK1P85037 733 aa3.75□□□□□ -1.81
SNORD28B-201ENST00000390993 PLPP6Q8IY26 295 aa3.75□□□□□ -1.81
SNORD28B-201ENST00000390993 KCNH8Q96L42 1107 aa3.75□□□□□ -1.81
SNORD28B-201ENST00000390993 GTPBP6O43824 516 aaPredicted RBP3.74□□□□□ -1.81
SNORD28B-201ENST00000390993 NKX1-1Q15270 411 aaPredicted RBP3.74□□□□□ -1.81
SNORD28B-201ENST00000390993 VARS2Q5ST30 1063 aaKnown RBP3.74□□□□□ -1.81
SNORD28B-201ENST00000390993 GPR153Q6NV75 609 aa3.74□□□□□ -1.81
SNORD28B-201ENST00000390993 SPRYD3Q8NCJ5 442 aa3.74□□□□□ -1.81
SNORD28B-201ENST00000390993 RTN4Q9NQC3 1192 aaKnown RBP3.74□□□□□ -1.81
SNORD28B-201ENST00000390993 PCDHGA4Q9Y5G9 962 aa3.74□□□□□ -1.81
SNORD28B-201ENST00000390993 NUDT7P0C024 238 aa3.73□□□□□ -1.81
SNORD28B-201ENST00000390993 PPP1R15BQ5SWA1 713 aa3.73□□□□□ -1.81
SNORD28B-201ENST00000390993 ZNF687Q8N1G0 1237 aa3.73□□□□□ -1.81
SNORD28B-201ENST00000390993 DDX27Q96GQ7 796 aaKnown RBP3.73□□□□□ -1.81
SNORD28B-201ENST00000390993 PBX2P40425 430 aa3.72□□□□□ -1.81
SNORD28B-201ENST00000390993 PTGER2P43116 358 aa3.72□□□□□ -1.81
SNORD28B-201ENST00000390993 DSG2Q14126 1118 aa3.72□□□□□ -1.81
SNORD28B-201ENST00000390993 PPP4R3BQ5MIZ7 849 aa3.72□□□□□ -1.81
SNORD28B-201ENST00000390993 LARP6Q9BRS8 491 aaKnown RBP3.72□□□□□ -1.81
SNORD28B-201ENST00000390993 MAP3K9P80192 1104 aa3.71□□□□□ -1.82
SNORD28B-201ENST00000390993 PTCD2Q8WV60 388 aaKnown RBP3.71□□□□□ -1.82
SNORD28B-201ENST00000390993 UPF1Q92900 1129 aaKnown RBP eCLIP3.71□□□□□ -1.82
SNORD28B-201ENST00000390993 STAC3Q96MF2 364 aa3.71□□□□□ -1.82
SNORD28B-201ENST00000390993 CFAP44Q96MT7 982 aa3.71□□□□□ -1.82
SNORD28B-201ENST00000390993 CRISPLD2Q9H0B8 497 aa3.71□□□□□ -1.82
SNORD28B-201ENST00000390993 WDR70Q9NW82 654 aa3.71□□□□□ -1.82
SNORD28B-201ENST00000390993 SPNS2Q8IVW8 549 aa3.7□□□□□ -1.82
SNORD28B-201ENST00000390993 KHSRPQ92945 711 aaKnown RBP eCLIP3.7□□□□□ -1.82
SNORD28B-201ENST00000390993 LHX6Q9UPM6 363 aa3.7□□□□□ -1.82
SNORD28B-201ENST00000390993 PAXIP1Q6ZW49 1069 aaPredicted RBP3.69□□□□□ -1.82
SNORD28B-201ENST00000390993 ANKRD13DQ6ZTN6 518 aa3.68□□□□□ -1.82
SNORD28B-201ENST00000390993 OXER1Q8TDS5 423 aa3.68□□□□□ -1.82
SNORD28B-201ENST00000390993 POTEB3A0JP26 581 aa3.67□□□□□ -1.82
SNORD28B-201ENST00000390993 ARHGAP33O14559 1287 aa3.67□□□□□ -1.82
SNORD28B-201ENST00000390993 LSM11P83369 360 aaKnown RBP eCLIP3.67□□□□□ -1.82
SNORD28B-201ENST00000390993 MFSD10Q14728 455 aa3.67□□□□□ -1.82
SNORD28B-201ENST00000390993 POTEBQ6S5H4 581 aa3.67□□□□□ -1.82
SNORD28B-201ENST00000390993 ZNF454Q8N9F8 522 aa3.67□□□□□ -1.82
SNORD28B-201ENST00000390993 KRTAP3-3Q9BYR6 98 aa3.67□□□□□ -1.82
SNORD28B-201ENST00000390993 KRTAP3-2Q9BYR7 98 aa3.67□□□□□ -1.82
SNORD28B-201ENST00000390993 NCKAP5LQ9HCH0 1330 aa3.67□□□□□ -1.82
SNORD28B-201ENST00000390993 EVI5O60447 810 aa3.66□□□□□ -1.82
SNORD28B-201ENST00000390993 MMRN1Q13201 1228 aa3.66□□□□□ -1.82
SNORD28B-201ENST00000390993 MYT1LQ9UL68 1186 aa3.66□□□□□ -1.82
SNORD28B-201ENST00000390993 PTPREP23469 700 aa3.65□□□□□ -1.83
SNORD28B-201ENST00000390993 RNF166Q96A37 237 aaPredicted RBP3.65□□□□□ -1.83
SNORD28B-201ENST00000390993 GOLGA8CPA6NN73 597 aa3.64□□□□□ -1.83
SNORD28B-201ENST00000390993 TK2O00142 265 aa3.64□□□□□ -1.83
SNORD28B-201ENST00000390993 FBXW7Q969H0 707 aa3.64□□□□□ -1.83
SNORD28B-201ENST00000390993 ZDHHC16Q969W1 377 aa3.64□□□□□ -1.83
SNORD28B-201ENST00000390993 JPH4Q96JJ6 628 aa3.64□□□□□ -1.83
SNORD28B-201ENST00000390993 SPDYE16A6NNV3 312 aaPredicted RBP3.63□□□□□ -1.83
SNORD28B-201ENST00000390993 FOSBP53539 338 aa3.63□□□□□ -1.83
SNORD28B-201ENST00000390993 E2F4Q16254 413 aa3.63□□□□□ -1.83
SNORD28B-201ENST00000390993 KCNK17Q96T54 332 aa3.63□□□□□ -1.83
SNORD28B-201ENST00000390993 EPAS1Q99814 870 aa3.63□□□□□ -1.83
SNORD28B-201ENST00000390993 ANO8Q9HCE9 1232 aaPredicted RBP3.63□□□□□ -1.83
SNORD28B-201ENST00000390993 AXIN2Q9Y2T1 843 aa3.63□□□□□ -1.83
SNORD28B-201ENST00000390993 PHF14O94880 888 aa3.62□□□□□ -1.83
SNORD28B-201ENST00000390993 TYW1BQ6NUM6 668 aa3.62□□□□□ -1.83
SNORD28B-201ENST00000390993 ADGRD1Q6QNK2 874 aa3.62□□□□□ -1.83
SNORD28B-201ENST00000390993 CADPS2Q86UW7 1296 aa3.62□□□□□ -1.83
SNORD28B-201ENST00000390993 BCL2L12Q9HB09 334 aa3.62□□□□□ -1.83
SNORD28B-201ENST00000390993 KDM4FA0A1W2PPD8 638 aa3.61□□□□□ -1.83
SNORD28B-201ENST00000390993 DPYSL4O14531 572 aa3.61□□□□□ -1.83
SNORD28B-201ENST00000390993 PSEN2P49810 448 aa3.61□□□□□ -1.83
SNORD28B-201ENST00000390993 CAMK2BQ13554 666 aa3.61□□□□□ -1.83
SNORD28B-201ENST00000390993 NBPF3Q9H094 633 aa3.61□□□□□ -1.83
SNORD28B-201ENST00000390993 P3H3Q8IVL6 736 aa3.6□□□□□ -1.83
SNORD28B-201ENST00000390993 SLC4A5Q9BY07 1137 aa3.6□□□□□ -1.83
SNORD28B-201ENST00000390993 EMILIN3Q9NT22 766 aa3.6□□□□□ -1.83
SNORD28B-201ENST00000390993 HCSTQ9UBK5 93 aa3.6□□□□□ -1.83
SNORD28B-201ENST00000390993 PPP1R3GB7ZBB8 358 aa3.59□□□□□ -1.83
SNORD28B-201ENST00000390993 MRPL50Q8N5N7 158 aaKnown RBP3.59□□□□□ -1.83
SNORD28B-201ENST00000390993 MAP3K7O43318 606 aa3.58□□□□□ -1.84
SNORD28B-201ENST00000390993 NBR1Q14596 966 aa3.58□□□□□ -1.84
SNORD28B-201ENST00000390993 DMRTA1Q5VZB9 504 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms