RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 SLAIN1Q8ND83 568 aa15.25■□□□□ 0.03
SNORA40.4-201ENST00000390971 PDE4AP27815 886 aa15.24■□□□□ 0.03
SNORA40.4-201ENST00000390971 CADPS2Q86UW7 1296 aa15.24■□□□□ 0.03
SNORA40.4-201ENST00000390971 TMC2Q8TDI7 906 aa15.24■□□□□ 0.03
SNORA40.4-201ENST00000390971 TMEM92Q6UXU6 159 aa15.21■□□□□ 0.03
SNORA40.4-201ENST00000390971 GPHNQ9NQX3 736 aaPredicted RBP15.2■□□□□ 0.02
SNORA40.4-201ENST00000390971 CRISPLD2Q9H0B8 497 aa15.19■□□□□ 0.02
SNORA40.4-201ENST00000390971 C2orf72A6NCS6 295 aa15.18■□□□□ 0.02
SNORA40.4-201ENST00000390971 KIF3CO14782 793 aa15.18■□□□□ 0.02
SNORA40.4-201ENST00000390971 NCKAP5LQ9HCH0 1330 aa15.17■□□□□ 0.02
SNORA40.4-201ENST00000390971 LARP6Q9BRS8 491 aaKnown RBP15.15■□□□□ 0.02
SNORA40.4-201ENST00000390971 FOXK1P85037 733 aa15.11■□□□□ 0.01
SNORA40.4-201ENST00000390971 DDX27Q96GQ7 796 aaKnown RBP15.09■□□□□ 0.01
SNORA40.4-201ENST00000390971 WDR70Q9NW82 654 aa15.09■□□□□ 0.01
SNORA40.4-201ENST00000390971 DSG2Q14126 1118 aa15.08■□□□□ 0
SNORA40.4-201ENST00000390971 MFSD10Q14728 455 aa15.08■□□□□ 0
SNORA40.4-201ENST00000390971 VSIG10Q8N0Z9 540 aa15.08■□□□□ 0
SNORA40.4-201ENST00000390971 SNPHO15079 494 aa15.07■□□□□ 0
SNORA40.4-201ENST00000390971 PPP1R15BQ5SWA1 713 aa15.06■□□□□ 0
SNORA40.4-201ENST00000390971 PLPP6Q8IY26 295 aa15.06■□□□□ 0
SNORA40.4-201ENST00000390971 SLC24A1O60721 1099 aa14.99□□□□□ -0.01
SNORA40.4-201ENST00000390971 DOK7Q18PE1 504 aa14.99□□□□□ -0.01
SNORA40.4-201ENST00000390971 KDM2AQ9Y2K7 1162 aa14.98□□□□□ -0.01
SNORA40.4-201ENST00000390971 HOXB3P14651 431 aaPredicted RBP14.95□□□□□ -0.02
SNORA40.4-201ENST00000390971 RIMBP2O15034 1052 aa14.94□□□□□ -0.02
SNORA40.4-201ENST00000390971 SLC34A2O95436 690 aa14.94□□□□□ -0.02
SNORA40.4-201ENST00000390971 E2F4Q16254 413 aa14.93□□□□□ -0.02
SNORA40.4-201ENST00000390971 CAMK2BQ13554 666 aa14.91□□□□□ -0.02
SNORA40.4-201ENST00000390971 ZNF710Q8N1W2 664 aa14.91□□□□□ -0.02
SNORA40.4-201ENST00000390971 ZSWIM6Q9HCJ5 1215 aa14.89□□□□□ -0.03
SNORA40.4-201ENST00000390971 TBC1D12O60347 775 aa14.88□□□□□ -0.03
SNORA40.4-201ENST00000390971 PTCD2Q8WV60 388 aaKnown RBP14.88□□□□□ -0.03
SNORA40.4-201ENST00000390971 FAM163AQ96GL9 167 aaPredicted RBP14.87□□□□□ -0.03
SNORA40.4-201ENST00000390971 OXER1Q8TDS5 423 aa14.85□□□□□ -0.03
SNORA40.4-201ENST00000390971 UPF1Q92900 1129 aaKnown RBP eCLIP14.83□□□□□ -0.04
SNORA40.4-201ENST00000390971 EMILIN3Q9NT22 766 aa14.83□□□□□ -0.04
SNORA40.4-201ENST00000390971 P3H3Q8IVL6 736 aa14.82□□□□□ -0.04
SNORA40.4-201ENST00000390971 PCDHGA4Q9Y5G9 962 aa14.82□□□□□ -0.04
SNORA40.4-201ENST00000390971 ST18O60284 1047 aa14.81□□□□□ -0.04
SNORA40.4-201ENST00000390971 MAP3K9P80192 1104 aa14.81□□□□□ -0.04
SNORA40.4-201ENST00000390971 GPR153Q6NV75 609 aa14.8□□□□□ -0.04
SNORA40.4-201ENST00000390971 ARSIQ5FYB1 569 aa14.79□□□□□ -0.04
SNORA40.4-201ENST00000390971 HOXB1P14653 301 aaPredicted RBP14.78□□□□□ -0.04
SNORA40.4-201ENST00000390971 ARIH1Q9Y4X5 557 aaPredicted RBP14.78□□□□□ -0.04
SNORA40.4-201ENST00000390971 KCNV2Q8TDN2 545 aa14.77□□□□□ -0.05
SNORA40.4-201ENST00000390971 ARHGEF1Q92888 912 aaKnown RBP14.77□□□□□ -0.05
SNORA40.4-201ENST00000390971 DPYSL4O14531 572 aa14.74□□□□□ -0.05
SNORA40.4-201ENST00000390971 KHSRPQ92945 711 aaKnown RBP eCLIP14.72□□□□□ -0.05
SNORA40.4-201ENST00000390971 ZNF316A6NFI3 1004 aaPredicted RBP14.71□□□□□ -0.05
SNORA40.4-201ENST00000390971 SPDYE16A6NNV3 312 aaPredicted RBP14.7□□□□□ -0.06
SNORA40.4-201ENST00000390971 EVI5O60447 810 aa14.7□□□□□ -0.06
SNORA40.4-201ENST00000390971 NUDT7P0C024 238 aa14.7□□□□□ -0.06
SNORA40.4-201ENST00000390971 LCE2DQ5TA82 110 aaPredicted RBP14.69□□□□□ -0.06
SNORA40.4-201ENST00000390971 KDM4FA0A1W2PPD8 638 aa14.67□□□□□ -0.06
SNORA40.4-201ENST00000390971 ANO8Q9HCE9 1232 aaPredicted RBP14.67□□□□□ -0.06
SNORA40.4-201ENST00000390971 MARVELD3Q96A59 401 aa14.65□□□□□ -0.06
SNORA40.4-201ENST00000390971 EMP3P54852 163 aa14.64□□□□□ -0.07
SNORA40.4-201ENST00000390971 PDIA6Q15084 440 aa14.64□□□□□ -0.07
SNORA40.4-201ENST00000390971 LHX6Q9UPM6 363 aa14.6□□□□□ -0.07
SNORA40.4-201ENST00000390971 ERBB3P21860 1342 aa14.6□□□□□ -0.07
SNORA40.4-201ENST00000390971 PSDA5PKW4 1024 aaPredicted RBP14.58□□□□□ -0.08
SNORA40.4-201ENST00000390971 PTGER2P43116 358 aa14.57□□□□□ -0.08
SNORA40.4-201ENST00000390971 FAM205CA6NFA0 338 aa14.56□□□□□ -0.08
SNORA40.4-201ENST00000390971 VARS2Q5ST30 1063 aaKnown RBP14.52□□□□□ -0.09
SNORA40.4-201ENST00000390971 FOSBP53539 338 aa14.5□□□□□ -0.09
SNORA40.4-201ENST00000390971 POTEGQ6S5H5 508 aa14.5□□□□□ -0.09
SNORA40.4-201ENST00000390971 JPH4Q96JJ6 628 aa14.5□□□□□ -0.09
SNORA40.4-201ENST00000390971 SEMA3EO15041 775 aa14.49□□□□□ -0.09
SNORA40.4-201ENST00000390971 PHF14O94880 888 aa14.49□□□□□ -0.09
SNORA40.4-201ENST00000390971 NBR1Q14596 966 aa14.49□□□□□ -0.09
SNORA40.4-201ENST00000390971 PPP4R3BQ5MIZ7 849 aa14.49□□□□□ -0.09
SNORA40.4-201ENST00000390971 ZNF454Q8N9F8 522 aa14.49□□□□□ -0.09
SNORA40.4-201ENST00000390971 DDX12PQ92771 950 aa14.49□□□□□ -0.09
SNORA40.4-201ENST00000390971 HS3ST6Q96QI5 342 aa14.49□□□□□ -0.09
SNORA40.4-201ENST00000390971 POTEMA6NI47 508 aa14.48□□□□□ -0.09
SNORA40.4-201ENST00000390971 EPAS1Q99814 870 aa14.48□□□□□ -0.09
SNORA40.4-201ENST00000390971 GRXCR2A6NFK2 248 aa14.47□□□□□ -0.09
SNORA40.4-201ENST00000390971 PCDHGA10Q9Y5H3 936 aa14.46□□□□□ -0.09
SNORA40.4-201ENST00000390971 TYW1BQ6NUM6 668 aa14.45□□□□□ -0.1
SNORA40.4-201ENST00000390971 POTEB3A0JP26 581 aa14.44□□□□□ -0.1
SNORA40.4-201ENST00000390971 TESPA1A2RU30 521 aaPredicted RBP14.44□□□□□ -0.1
SNORA40.4-201ENST00000390971 SMYD5Q6GMV2 418 aa14.44□□□□□ -0.1
SNORA40.4-201ENST00000390971 POTEBQ6S5H4 581 aa14.44□□□□□ -0.1
SNORA40.4-201ENST00000390971 FBXW7Q969H0 707 aa14.44□□□□□ -0.1
SNORA40.4-201ENST00000390971 ZDHHC16Q969W1 377 aa14.44□□□□□ -0.1
SNORA40.4-201ENST00000390971 MLLT3P42568 568 aaPredicted RBP14.43□□□□□ -0.1
SNORA40.4-201ENST00000390971 ZNF687Q8N1G0 1237 aa14.43□□□□□ -0.1
SNORA40.4-201ENST00000390971 TULP1O00294 542 aaPredicted RBP14.38□□□□□ -0.11
SNORA40.4-201ENST00000390971 OSBPP22059 807 aa14.38□□□□□ -0.11
SNORA40.4-201ENST00000390971 BCANQ96GW7 911 aa14.37□□□□□ -0.11
SNORA40.4-201ENST00000390971 BCL2L12Q9HB09 334 aa14.37□□□□□ -0.11
SNORA40.4-201ENST00000390971 PBX2P40425 430 aa14.36□□□□□ -0.11
SNORA40.4-201ENST00000390971 ADAM33Q9BZ11 813 aa14.36□□□□□ -0.11
SNORA40.4-201ENST00000390971 EN1Q05925 392 aaPredicted RBP14.34□□□□□ -0.11
SNORA40.4-201ENST00000390971 RBM33Q96EV2 1170 aaKnown RBP14.34□□□□□ -0.11
SNORA40.4-201ENST00000390971 KCNH8Q96L42 1107 aa14.33□□□□□ -0.12
SNORA40.4-201ENST00000390971 ARHGAP33O14559 1287 aa14.32□□□□□ -0.12
SNORA40.4-201ENST00000390971 MAP3K7O43318 606 aa14.32□□□□□ -0.12
SNORA40.4-201ENST00000390971 PTPREP23469 700 aa14.32□□□□□ -0.12
SNORA40.4-201ENST00000390971 CDAN1Q8IWY9 1227 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms