RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 KHSRPQ92945 711 aaKnown RBP eCLIP5.6□□□□□ -1.51
RNU6-440P-201ENST00000390882 GSE1Q14687 1217 aa5.59□□□□□ -1.51
RNU6-440P-201ENST00000390882 A0A0G2JS52 829 aa5.58□□□□□ -1.52
RNU6-440P-201ENST00000390882 KCTD12Q96CX2 325 aaKnown RBP5.57□□□□□ -1.52
RNU6-440P-201ENST00000390882 MICALL2Q8IY33 904 aa5.56□□□□□ -1.52
RNU6-440P-201ENST00000390882 TK2O00142 265 aa5.55□□□□□ -1.52
RNU6-440P-201ENST00000390882 ARHGAP33O14559 1287 aa5.55□□□□□ -1.52
RNU6-440P-201ENST00000390882 HRO43593 1189 aa5.55□□□□□ -1.52
RNU6-440P-201ENST00000390882 EHMT2Q96KQ7 1210 aa5.55□□□□□ -1.52
RNU6-440P-201ENST00000390882 STAC3Q96MF2 364 aa5.54□□□□□ -1.52
RNU6-440P-201ENST00000390882 LHX6Q9UPM6 363 aa5.52□□□□□ -1.53
RNU6-440P-201ENST00000390882 NUDT7P0C024 238 aa5.51□□□□□ -1.53
RNU6-440P-201ENST00000390882 PTPN5P54829 565 aa5.51□□□□□ -1.53
RNU6-440P-201ENST00000390882 LAPTM4AQ15012 233 aa5.5□□□□□ -1.53
RNU6-440P-201ENST00000390882 TRAF7Q6Q0C0 670 aa5.5□□□□□ -1.53
RNU6-440P-201ENST00000390882 EFCAB3Q8N7B9 438 aa5.48□□□□□ -1.53
RNU6-440P-201ENST00000390882 PSDA5PKW4 1024 aaPredicted RBP5.47□□□□□ -1.53
RNU6-440P-201ENST00000390882 DMRTA1Q5VZB9 504 aa5.46□□□□□ -1.54
RNU6-440P-201ENST00000390882 LCE2BO14633 110 aa5.45□□□□□ -1.54
RNU6-440P-201ENST00000390882 PSEN2P49810 448 aa5.43□□□□□ -1.54
RNU6-440P-201ENST00000390882 PCDHGA4Q9Y5G9 962 aa5.43□□□□□ -1.54
RNU6-440P-201ENST00000390882 SOX12O15370 315 aa5.42□□□□□ -1.54
RNU6-440P-201ENST00000390882 SLC34A2O95436 690 aa5.42□□□□□ -1.54
RNU6-440P-201ENST00000390882 ZNF787Q6DD87 383 aa5.41□□□□□ -1.54
RNU6-440P-201ENST00000390882 KLHL34Q8N239 644 aa5.41□□□□□ -1.54
RNU6-440P-201ENST00000390882 GFRA3O60609 400 aa5.4□□□□□ -1.54
RNU6-440P-201ENST00000390882 THSD4Q6ZMP0 1018 aa5.4□□□□□ -1.54
RNU6-440P-201ENST00000390882 ZNF775Q96BV0 537 aaPredicted RBP5.4□□□□□ -1.54
RNU6-440P-201ENST00000390882 MS4A4AQ96JQ5 239 aa5.38□□□□□ -1.55
RNU6-440P-201ENST00000390882 KIF3CO14782 793 aa5.36□□□□□ -1.55
RNU6-440P-201ENST00000390882 ITGBL1O95965 494 aaPredicted RBP5.36□□□□□ -1.55
RNU6-440P-201ENST00000390882 KCNH8Q96L42 1107 aa5.36□□□□□ -1.55
RNU6-440P-201ENST00000390882 VPS9D1Q9Y2B5 631 aa5.36□□□□□ -1.55
RNU6-440P-201ENST00000390882 GOLGA8CPA6NN73 597 aa5.35□□□□□ -1.55
RNU6-440P-201ENST00000390882 PPP4R3BQ5MIZ7 849 aa5.35□□□□□ -1.55
RNU6-440P-201ENST00000390882 C2orf72A6NCS6 295 aa5.34□□□□□ -1.55
RNU6-440P-201ENST00000390882 WNT2BQ93097 391 aa5.34□□□□□ -1.55
RNU6-440P-201ENST00000390882 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
RNU6-440P-201ENST00000390882 KRTAP4-6Q9BYQ5 205 aa5.33□□□□□ -1.56
RNU6-440P-201ENST00000390882 FBXO3Q9UK99 471 aa5.33□□□□□ -1.56
RNU6-440P-201ENST00000390882 PHF8Q9UPP1 1060 aa5.33□□□□□ -1.56
RNU6-440P-201ENST00000390882 KDM4FA0A1W2PPD8 638 aa5.32□□□□□ -1.56
RNU6-440P-201ENST00000390882 NRG2O14511 850 aaPredicted RBP5.32□□□□□ -1.56
RNU6-440P-201ENST00000390882 BHMG1C9JSJ3 638 aaPredicted RBP5.31□□□□□ -1.56
RNU6-440P-201ENST00000390882 KCNK17Q96T54 332 aa5.31□□□□□ -1.56
RNU6-440P-201ENST00000390882 SLC4A5Q9BY07 1137 aa5.31□□□□□ -1.56
RNU6-440P-201ENST00000390882 CIZ1Q9ULV3 898 aaPredicted RBP5.3□□□□□ -1.56
RNU6-440P-201ENST00000390882 MRPL50Q8N5N7 158 aaKnown RBP5.29□□□□□ -1.56
RNU6-440P-201ENST00000390882 NLRP6P59044 892 aa5.27□□□□□ -1.57
RNU6-440P-201ENST00000390882 KCNC4Q03721 635 aa5.27□□□□□ -1.57
RNU6-440P-201ENST00000390882 PTCD2Q8WV60 388 aaKnown RBP5.26□□□□□ -1.57
RNU6-440P-201ENST00000390882 TMC2Q8TDI7 906 aa5.25□□□□□ -1.57
RNU6-440P-201ENST00000390882 NYAP1Q6ZVC0 841 aa5.24□□□□□ -1.57
RNU6-440P-201ENST00000390882 VASPP50552 380 aaPredicted RBP5.23□□□□□ -1.57
RNU6-440P-201ENST00000390882 NBPF3Q9H094 633 aa5.23□□□□□ -1.57
RNU6-440P-201ENST00000390882 TRIM41Q8WV44 630 aa5.22□□□□□ -1.57
RNU6-440P-201ENST00000390882 TBC1D12O60347 775 aa5.21□□□□□ -1.58
RNU6-440P-201ENST00000390882 TREML4Q6UXN2 200 aa5.21□□□□□ -1.58
RNU6-440P-201ENST00000390882 FBXO22Q8NEZ5 403 aa5.21□□□□□ -1.58
RNU6-440P-201ENST00000390882 SPOCK2Q92563 424 aa5.21□□□□□ -1.58
RNU6-440P-201ENST00000390882 PRKD2Q9BZL6 878 aa5.21□□□□□ -1.58
RNU6-440P-201ENST00000390882 BCL2L12Q9HB09 334 aa5.21□□□□□ -1.58
RNU6-440P-201ENST00000390882 ANKK1Q8NFD2 765 aa5.2□□□□□ -1.58
RNU6-440P-201ENST00000390882 ZBED2Q9BTP6 218 aa5.2□□□□□ -1.58
RNU6-440P-201ENST00000390882 STK17AQ9UEE5 414 aa5.2□□□□□ -1.58
RNU6-440P-201ENST00000390882 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.19□□□□□ -1.58
RNU6-440P-201ENST00000390882 ZFP91Q96JP5 570 aaPredicted RBP5.19□□□□□ -1.58
RNU6-440P-201ENST00000390882 V9GY48 417 aaPredicted RBP5.19□□□□□ -1.58
RNU6-440P-201ENST00000390882 PTPREP23469 700 aa5.18□□□□□ -1.58
RNU6-440P-201ENST00000390882 FKBP8Q14318 412 aa5.18□□□□□ -1.58
RNU6-440P-201ENST00000390882 LCE2AQ5TA79 106 aaPredicted RBP5.18□□□□□ -1.58
RNU6-440P-201ENST00000390882 PDZRN3Q9UPQ7 1066 aa5.17□□□□□ -1.58
RNU6-440P-201ENST00000390882 RIOK3O14730 519 aaKnown RBP5.16□□□□□ -1.58
RNU6-440P-201ENST00000390882 SOWAHBA6NEL2 793 aa5.15□□□□□ -1.59
RNU6-440P-201ENST00000390882 VGFO15240 615 aaPredicted RBP5.15□□□□□ -1.59
RNU6-440P-201ENST00000390882 ZNF454Q8N9F8 522 aa5.15□□□□□ -1.59
RNU6-440P-201ENST00000390882 BCAMP50895 628 aa5.14□□□□□ -1.59
RNU6-440P-201ENST00000390882 WBP1LQ9NX94 342 aa5.14□□□□□ -1.59
RNU6-440P-201ENST00000390882 POTECB2RU33 542 aa5.12□□□□□ -1.59
RNU6-440P-201ENST00000390882 MFRPQ9BY79 579 aa5.12□□□□□ -1.59
RNU6-440P-201ENST00000390882 RABGEF1Q9UJ41 708 aa5.12□□□□□ -1.59
RNU6-440P-201ENST00000390882 FOXK1P85037 733 aa5.11□□□□□ -1.59
RNU6-440P-201ENST00000390882 PLPP6Q8IY26 295 aa5.11□□□□□ -1.59
RNU6-440P-201ENST00000390882 INSM1Q01101 510 aaPredicted RBP5.1□□□□□ -1.59
RNU6-440P-201ENST00000390882 LAPTM4BQ86VI4 370 aa5.1□□□□□ -1.59
RNU6-440P-201ENST00000390882 FOSBP53539 338 aa5.09□□□□□ -1.59
RNU6-440P-201ENST00000390882 MYT1Q01538 1121 aa5.09□□□□□ -1.59
RNU6-440P-201ENST00000390882 PPP1R18Q6NYC8 613 aa5.08□□□□□ -1.6
RNU6-440P-201ENST00000390882 IFNLR1Q8IU57 520 aaPredicted RBP5.08□□□□□ -1.6
RNU6-440P-201ENST00000390882 ZFRQ96KR1 1074 aaKnown RBP5.08□□□□□ -1.6
RNU6-440P-201ENST00000390882 DGAT1O75907 488 aa5.07□□□□□ -1.6
RNU6-440P-201ENST00000390882 WFS1O76024 890 aa5.07□□□□□ -1.6
RNU6-440P-201ENST00000390882 PKDCCQ504Y2 493 aa5.07□□□□□ -1.6
RNU6-440P-201ENST00000390882 RNF25Q96BH1 459 aaPredicted RBP5.07□□□□□ -1.6
RNU6-440P-201ENST00000390882 WIPF1O43516 503 aa5.06□□□□□ -1.6
RNU6-440P-201ENST00000390882 SUZ12Q15022 739 aaKnown RBP5.06□□□□□ -1.6
RNU6-440P-201ENST00000390882 BCL11BQ9C0K0 894 aaPredicted RBP5.06□□□□□ -1.6
RNU6-440P-201ENST00000390882 TSR3Q9UJK0 312 aaKnown RBP5.06□□□□□ -1.6
RNU6-440P-201ENST00000390882 ZDHHC16Q969W1 377 aa5.05□□□□□ -1.6
RNU6-440P-201ENST00000390882 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms