RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 KDM4CQ9H3R0 1056 aa4.79□□□□□ -1.64
TRAJ17-201ENST00000390520 SERPINA10Q9UK55 444 aa4.79□□□□□ -1.64
TRAJ17-201ENST00000390520 EXOC8Q8IYI6 725 aa4.78□□□□□ -1.64
TRAJ17-201ENST00000390520 ZNF526Q8TF50 670 aaPredicted RBP4.78□□□□□ -1.64
TRAJ17-201ENST00000390520 ZC3H4Q9UPT8 1303 aaKnown RBP4.77□□□□□ -1.65
TRAJ17-201ENST00000390520 CLUAP1Q96AJ1 413 aa4.77□□□□□ -1.65
TRAJ17-201ENST00000390520 RIPOR2Q9Y4F9 1068 aa4.77□□□□□ -1.65
TRAJ17-201ENST00000390520 ARIH1Q9Y4X5 557 aaPredicted RBP4.77□□□□□ -1.65
TRAJ17-201ENST00000390520 SMARCA5O60264 1052 aaPredicted RBP4.76□□□□□ -1.65
TRAJ17-201ENST00000390520 AK7Q96M32 723 aa4.76□□□□□ -1.65
TRAJ17-201ENST00000390520 UNCXA6NJT0 531 aa4.75□□□□□ -1.65
TRAJ17-201ENST00000390520 PTMSP20962 102 aa4.75□□□□□ -1.65
TRAJ17-201ENST00000390520 ANAPC15P60006 121 aa4.75□□□□□ -1.65
TRAJ17-201ENST00000390520 GRIPAP1Q4V328 841 aa4.75□□□□□ -1.65
TRAJ17-201ENST00000390520 HSP90AB4PQ58FF6 505 aa4.75□□□□□ -1.65
TRAJ17-201ENST00000390520 TESPA1A2RU30 521 aaPredicted RBP4.74□□□□□ -1.65
TRAJ17-201ENST00000390520 CHRM1P11229 460 aaPredicted RBP4.74□□□□□ -1.65
TRAJ17-201ENST00000390520 CCDC97Q96F63 343 aaPredicted RBP4.74□□□□□ -1.65
TRAJ17-201ENST00000390520 PRDM10Q9NQV6 1147 aa4.74□□□□□ -1.65
TRAJ17-201ENST00000390520 KCNA1Q09470 495 aa4.73□□□□□ -1.65
TRAJ17-201ENST00000390520 NOL8Q76FK4 1167 aaKnown RBP4.73□□□□□ -1.65
TRAJ17-201ENST00000390520 ZNF777Q9ULD5 760 aaPredicted RBP4.73□□□□□ -1.65
TRAJ17-201ENST00000390520 BRD1O95696 1058 aa4.72□□□□□ -1.65
TRAJ17-201ENST00000390520 MCCP23508 829 aa4.72□□□□□ -1.65
TRAJ17-201ENST00000390520 CNPY4Q8N129 248 aa4.72□□□□□ -1.65
TRAJ17-201ENST00000390520 TRIM41Q8WV44 630 aa4.72□□□□□ -1.65
TRAJ17-201ENST00000390520 ARHGEF1Q92888 912 aaKnown RBP4.72□□□□□ -1.65
TRAJ17-201ENST00000390520 DNAJC2Q99543 621 aaKnown RBP4.72□□□□□ -1.65
TRAJ17-201ENST00000390520 FNBP4Q8N3X1 1017 aaPredicted RBP4.71□□□□□ -1.66
TRAJ17-201ENST00000390520 GPATCH11Q8N954 259 aa4.71□□□□□ -1.66
TRAJ17-201ENST00000390520 DRC1Q96MC2 740 aa4.71□□□□□ -1.66
TRAJ17-201ENST00000390520 MYH16Q9H6N6 1097 aa4.71□□□□□ -1.66
TRAJ17-201ENST00000390520 RBM47A0AV96 593 aaKnown RBP4.7□□□□□ -1.66
TRAJ17-201ENST00000390520 MARCH6O60337 910 aa4.7□□□□□ -1.66
TRAJ17-201ENST00000390520 CENPBP07199 599 aaPredicted RBP4.7□□□□□ -1.66
TRAJ17-201ENST00000390520 RNF25Q96BH1 459 aaPredicted RBP4.7□□□□□ -1.66
TRAJ17-201ENST00000390520 SEMA3EO15041 775 aa4.69□□□□□ -1.66
TRAJ17-201ENST00000390520 TPD52L2O43399 206 aaKnown RBP4.69□□□□□ -1.66
TRAJ17-201ENST00000390520 PPP1R15AO75807 674 aaPredicted RBP4.69□□□□□ -1.66
TRAJ17-201ENST00000390520 PDE4DQ08499 809 aa4.69□□□□□ -1.66
TRAJ17-201ENST00000390520 PROSER2Q86WR7 435 aaPredicted RBP4.69□□□□□ -1.66
TRAJ17-201ENST00000390520 FAM117AQ9C073 453 aa4.69□□□□□ -1.66
TRAJ17-201ENST00000390520 RYDENQ9NUL5 291 aaKnown RBP4.69□□□□□ -1.66
TRAJ17-201ENST00000390520 PPME1Q9Y570 386 aa4.69□□□□□ -1.66
TRAJ17-201ENST00000390520 CLSPNQ9HAW4 1339 aa4.69□□□□□ -1.66
TRAJ17-201ENST00000390520 PLEKHG3A1L390 1219 aa4.68□□□□□ -1.66
TRAJ17-201ENST00000390520 ANKRD62A6NC57 917 aa4.68□□□□□ -1.66
TRAJ17-201ENST00000390520 TRIM66O15016 1216 aa4.68□□□□□ -1.66
TRAJ17-201ENST00000390520 POLA2Q14181 598 aa4.68□□□□□ -1.66
TRAJ17-201ENST00000390520 SPTY2D1Q68D10 685 aaPredicted RBP4.68□□□□□ -1.66
TRAJ17-201ENST00000390520 SIRT1Q96EB6 747 aa4.68□□□□□ -1.66
TRAJ17-201ENST00000390520 HIRIP3Q9BW71 556 aaPredicted RBP4.68□□□□□ -1.66
TRAJ17-201ENST00000390520 ANO8Q9HCE9 1232 aaPredicted RBP4.68□□□□□ -1.66
TRAJ17-201ENST00000390520 PLSCR2Q9NRY7 297 aa4.68□□□□□ -1.66
TRAJ17-201ENST00000390520 SUGT1Q9Y2Z0 365 aa4.68□□□□□ -1.66
TRAJ17-201ENST00000390520 MCCD1P59942 119 aaPredicted RBP4.67□□□□□ -1.66
TRAJ17-201ENST00000390520 MKRN4PQ13434 485 aaPredicted RBP4.67□□□□□ -1.66
TRAJ17-201ENST00000390520 SND1Q7KZF4 910 aaKnown RBP eCLIP4.67□□□□□ -1.66
TRAJ17-201ENST00000390520 TMTC2Q8N394 836 aa4.67□□□□□ -1.66
TRAJ17-201ENST00000390520 SREK1Q8WXA9 508 aaKnown RBP4.67□□□□□ -1.66
TRAJ17-201ENST00000390520 C8orf37Q96NL8 207 aa4.67□□□□□ -1.66
TRAJ17-201ENST00000390520 GOPCQ9HD26 462 aa4.67□□□□□ -1.66
TRAJ17-201ENST00000390520 KIAA1522Q9P206 1035 aaPredicted RBP4.67□□□□□ -1.66
TRAJ17-201ENST00000390520 CIZ1Q9ULV3 898 aaPredicted RBP4.67□□□□□ -1.66
TRAJ17-201ENST00000390520 LAS1LQ9Y4W2 734 aaKnown RBP4.67□□□□□ -1.66
TRAJ17-201ENST00000390520 RBM10P98175 930 aaKnown RBP4.66□□□□□ -1.66
TRAJ17-201ENST00000390520 MCM6Q14566 821 aa4.66□□□□□ -1.66
TRAJ17-201ENST00000390520 GORABQ5T7V8 394 aa4.66□□□□□ -1.66
TRAJ17-201ENST00000390520 SGSM3Q96HU1 749 aa4.66□□□□□ -1.66
TRAJ17-201ENST00000390520 MYT1LQ9UL68 1186 aa4.66□□□□□ -1.66
TRAJ17-201ENST00000390520 NEFMP07197 916 aa4.65□□□□□ -1.67
TRAJ17-201ENST00000390520 TCF3P15923 654 aa4.65□□□□□ -1.67
TRAJ17-201ENST00000390520 TSR1Q2NL82 804 aaKnown RBP4.65□□□□□ -1.67
TRAJ17-201ENST00000390520 CADPS2Q86UW7 1296 aa4.65□□□□□ -1.67
TRAJ17-201ENST00000390520 DDRGK1Q96HY6 314 aa4.65□□□□□ -1.67
TRAJ17-201ENST00000390520 SLC52A1Q9NWF4 448 aa4.65□□□□□ -1.67
TRAJ17-201ENST00000390520 SMYD5Q6GMV2 418 aa4.64□□□□□ -1.67
TRAJ17-201ENST00000390520 FAM43BQ6ZT52 329 aaPredicted RBP4.64□□□□□ -1.67
TRAJ17-201ENST00000390520 NME8Q8N427 588 aa4.64□□□□□ -1.67
TRAJ17-201ENST00000390520 RBM27Q9P2N5 1060 aaKnown RBP4.64□□□□□ -1.67
TRAJ17-201ENST00000390520 ACIN1Q9UKV3 1341 aaKnown RBP4.64□□□□□ -1.67
TRAJ17-201ENST00000390520 PTMAP06454 111 aaKnown RBP4.63□□□□□ -1.67
TRAJ17-201ENST00000390520 ERCC3P19447 782 aa4.63□□□□□ -1.67
TRAJ17-201ENST00000390520 HOXD11P31277 338 aaPredicted RBP4.63□□□□□ -1.67
TRAJ17-201ENST00000390520 FAM50AQ14320 339 aaKnown RBP4.63□□□□□ -1.67
TRAJ17-201ENST00000390520 MICAL1Q8TDZ2 1067 aa4.63□□□□□ -1.67
TRAJ17-201ENST00000390520 UBXN4Q92575 508 aa4.63□□□□□ -1.67
TRAJ17-201ENST00000390520 UBA5Q9GZZ9 404 aa4.63□□□□□ -1.67
TRAJ17-201ENST00000390520 TERF2IPQ9NYB0 399 aa4.63□□□□□ -1.67
TRAJ17-201ENST00000390520 ZNF219Q9P2Y4 722 aaPredicted RBP4.63□□□□□ -1.67
TRAJ17-201ENST00000390520 RIOK3O14730 519 aaKnown RBP4.62□□□□□ -1.67
TRAJ17-201ENST00000390520 RALBP1Q15311 655 aa4.62□□□□□ -1.67
TRAJ17-201ENST00000390520 KRI1Q8N9T8 703 aaKnown RBP4.62□□□□□ -1.67
TRAJ17-201ENST00000390520 MRRFQ96E11 262 aaKnown RBP4.62□□□□□ -1.67
TRAJ17-201ENST00000390520 HMGB1P1B2RPK0 211 aaPredicted RBP4.61□□□□□ -1.67
TRAJ17-201ENST00000390520 CCDC181Q5TID7 509 aa4.61□□□□□ -1.67
TRAJ17-201ENST00000390520 GIMAP6Q6P9H5 292 aa4.61□□□□□ -1.67
TRAJ17-201ENST00000390520 TXNDC2Q86VQ3 553 aa4.61□□□□□ -1.67
TRAJ17-201ENST00000390520 WWC1Q8IX03 1113 aa4.61□□□□□ -1.67
TRAJ17-201ENST00000390520 USTQ9Y2C2 406 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms