RNA–Protein interactions for RNA: ENST00000390458.3

TRAV29DV5-201, Transcript of T cell receptor alpha variable 29/delta variable 5 (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene TRAV29DV5, Length 469 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV29DV5-201ENST00000390458 LRRIQ1Q96JM4 1722 aa16.14■□□□□ 0.17
TRAV29DV5-201ENST00000390458 CLIP1P30622 1438 aa16.14■□□□□ 0.17
TRAV29DV5-201ENST00000390458 CASKIN1Q8WXD9 1431 aa16.14■□□□□ 0.17
TRAV29DV5-201ENST00000390458 PLCH2O75038 1416 aa16.13■□□□□ 0.17
TRAV29DV5-201ENST00000390458 TROQ12816 1431 aaPredicted RBP16.13■□□□□ 0.17
TRAV29DV5-201ENST00000390458 RAPGEF3O95398 923 aa16.13■□□□□ 0.17
TRAV29DV5-201ENST00000390458 PCF11O94913 1555 aaKnown RBP16.13■□□□□ 0.17
TRAV29DV5-201ENST00000390458 MAGI2Q86UL8 1455 aa16.11■□□□□ 0.17
TRAV29DV5-201ENST00000390458 FYCO1Q9BQS8 1478 aa16.11■□□□□ 0.17
TRAV29DV5-201ENST00000390458 ATP1B4Q9UN42 357 aaPredicted RBP16.11■□□□□ 0.17
TRAV29DV5-201ENST00000390458 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
TRAV29DV5-201ENST00000390458 ADAMTSL3P82987 1691 aa16.1■□□□□ 0.17
TRAV29DV5-201ENST00000390458 BCORL1Q5H9F3 1711 aa16.08■□□□□ 0.17
TRAV29DV5-201ENST00000390458 POGZQ7Z3K3 1410 aa16.08■□□□□ 0.16
TRAV29DV5-201ENST00000390458 ZFYVE16Q7Z3T8 1539 aa16.08■□□□□ 0.16
TRAV29DV5-201ENST00000390458 EFCAB2Q5VUJ9 269 aa16.05■□□□□ 0.16
TRAV29DV5-201ENST00000390458 PREX2Q70Z35 1606 aa16.05■□□□□ 0.16
TRAV29DV5-201ENST00000390458 ARHGAP5Q13017 1502 aa16.04■□□□□ 0.16
TRAV29DV5-201ENST00000390458 SCAPERQ9BY12 1400 aa16.04■□□□□ 0.16
TRAV29DV5-201ENST00000390458 HECW2Q9P2P5 1572 aa16.04■□□□□ 0.16
TRAV29DV5-201ENST00000390458 ZNF518AQ6AHZ1 1483 aa16.03■□□□□ 0.16
TRAV29DV5-201ENST00000390458 CDC42BPBQ9Y5S2 1711 aa16.02■□□□□ 0.15
TRAV29DV5-201ENST00000390458 KDM5CP41229 1560 aa16.01■□□□□ 0.15
TRAV29DV5-201ENST00000390458 PTPRMP28827 1452 aa16.01■□□□□ 0.15
TRAV29DV5-201ENST00000390458 MADDQ8WXG6 1647 aa16.01■□□□□ 0.15
TRAV29DV5-201ENST00000390458 ARID4BQ4LE39 1312 aaPredicted RBP15.99■□□□□ 0.15
TRAV29DV5-201ENST00000390458 CDC42BPAQ5VT25 1732 aa15.99■□□□□ 0.15
TRAV29DV5-201ENST00000390458 YEATS2Q9ULM3 1422 aa15.98■□□□□ 0.15
TRAV29DV5-201ENST00000390458 ABCC1P33527 1531 aa15.97■□□□□ 0.15
TRAV29DV5-201ENST00000390458 ATP10AO60312 1499 aa15.97■□□□□ 0.15
TRAV29DV5-201ENST00000390458 C9orf84Q5VXU9 1444 aa15.96■□□□□ 0.15
TRAV29DV5-201ENST00000390458 RIMS1Q86UR5 1692 aaKnown RBP15.95■□□□□ 0.14
TRAV29DV5-201ENST00000390458 ITSN2Q9NZM3 1697 aa15.95■□□□□ 0.14
TRAV29DV5-201ENST00000390458 SIGLEC1Q9BZZ2 1709 aa15.95■□□□□ 0.14
TRAV29DV5-201ENST00000390458 REREQ9P2R6 1566 aa15.95■□□□□ 0.14
TRAV29DV5-201ENST00000390458 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
TRAV29DV5-201ENST00000390458 FER1L4A9Z1Z3 1794 aa15.93■□□□□ 0.14
TRAV29DV5-201ENST00000390458 MLH3Q9UHC1 1453 aa15.93■□□□□ 0.14
TRAV29DV5-201ENST00000390458 DIP2CQ9Y2E4 1556 aa15.91■□□□□ 0.14
TRAV29DV5-201ENST00000390458 EHBP1L1Q8N3D4 1523 aa15.9■□□□□ 0.14
TRAV29DV5-201ENST00000390458 ARHGEF12Q9NZN5 1544 aa15.9■□□□□ 0.14
TRAV29DV5-201ENST00000390458 PLEKHH2Q8IVE3 1493 aa15.89■□□□□ 0.13
TRAV29DV5-201ENST00000390458 GPATCH8Q9UKJ3 1502 aaKnown RBP15.89■□□□□ 0.13
TRAV29DV5-201ENST00000390458 MTUS2Q5JR59 1369 aa15.88■□□□□ 0.13
TRAV29DV5-201ENST00000390458 SAMD9LQ8IVG5 1584 aa15.88■□□□□ 0.13
TRAV29DV5-201ENST00000390458 ABCA6Q8N139 1617 aa15.88■□□□□ 0.13
TRAV29DV5-201ENST00000390458 AFAP1Q8N556 730 aa15.87■□□□□ 0.13
TRAV29DV5-201ENST00000390458 KIAA1107Q9UPP5 1409 aa15.86■□□□□ 0.13
TRAV29DV5-201ENST00000390458 AGLP35573 1532 aa15.86■□□□□ 0.13
TRAV29DV5-201ENST00000390458 TRAPPC8Q9Y2L5 1435 aa15.85■□□□□ 0.13
TRAV29DV5-201ENST00000390458 KIDINS220Q9ULH0 1771 aa15.85■□□□□ 0.13
TRAV29DV5-201ENST00000390458 SYCP2Q9BX26 1530 aa15.85■□□□□ 0.13
TRAV29DV5-201ENST00000390458 CCNB3Q8WWL7 1395 aa15.85■□□□□ 0.13
TRAV29DV5-201ENST00000390458 LMTK3Q96Q04 1460 aa15.84■□□□□ 0.13
TRAV29DV5-201ENST00000390458 CNKSR2Q8WXI2 1034 aa15.83■□□□□ 0.12
TRAV29DV5-201ENST00000390458 TIAM1Q13009 1591 aa15.83■□□□□ 0.12
TRAV29DV5-201ENST00000390458 MYT1LQ9UL68 1186 aa15.82■□□□□ 0.12
TRAV29DV5-201ENST00000390458 SUPT6HQ7KZ85 1726 aaKnown RBP15.81■□□□□ 0.12
TRAV29DV5-201ENST00000390458 CFDP1Q9UEE9 299 aaPredicted RBP15.81■□□□□ 0.12
TRAV29DV5-201ENST00000390458 INO80Q9ULG1 1556 aaPredicted RBP15.81■□□□□ 0.12
TRAV29DV5-201ENST00000390458 PREX1Q8TCU6 1659 aa15.8■□□□□ 0.12
TRAV29DV5-201ENST00000390458 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
TRAV29DV5-201ENST00000390458 ATP7AQ04656 1500 aa15.79■□□□□ 0.12
TRAV29DV5-201ENST00000390458 MLECQ14165 292 aa15.79■□□□□ 0.12
TRAV29DV5-201ENST00000390458 VPS8Q8N3P4 1428 aa15.78■□□□□ 0.12
TRAV29DV5-201ENST00000390458 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
TRAV29DV5-201ENST00000390458 ZNF777Q9ULD5 760 aaPredicted RBP15.78■□□□□ 0.12
TRAV29DV5-201ENST00000390458 SPAG9O60271 1321 aaKnown RBP15.77■□□□□ 0.12
TRAV29DV5-201ENST00000390458 CNTLNQ9NXG0 1405 aa15.77■□□□□ 0.11
TRAV29DV5-201ENST00000390458 ADGBQ8N7X0 1667 aa15.76■□□□□ 0.11
TRAV29DV5-201ENST00000390458 PLXNC1O60486 1568 aa15.76■□□□□ 0.11
TRAV29DV5-201ENST00000390458 MAP3K1Q13233 1512 aa15.75■□□□□ 0.11
TRAV29DV5-201ENST00000390458 MROH2AA6NES4 1674 aa15.75■□□□□ 0.11
TRAV29DV5-201ENST00000390458 SETD1BQ9UPS6 1966 aaKnown RBP15.75■□□□□ 0.11
TRAV29DV5-201ENST00000390458 C3P01024 1663 aa15.74■□□□□ 0.11
TRAV29DV5-201ENST00000390458 NCOA2Q15596 1464 aa15.74■□□□□ 0.11
TRAV29DV5-201ENST00000390458 HNRNPMP52272 730 aaKnown RBP eCLIP15.73■□□□□ 0.11
TRAV29DV5-201ENST00000390458 MBD5Q9P267 1494 aa15.72■□□□□ 0.11
TRAV29DV5-201ENST00000390458 RTEL1-TNFRSF6BF6WH68 1400 aa15.72■□□□□ 0.11
TRAV29DV5-201ENST00000390458 ESF1Q9H501 851 aaKnown RBP15.72■□□□□ 0.11
TRAV29DV5-201ENST00000390458 A2MP01023 1474 aa15.71■□□□□ 0.11
TRAV29DV5-201ENST00000390458 LRRC9Q6ZRR7 1453 aa15.71■□□□□ 0.1
TRAV29DV5-201ENST00000390458 UHRF1BP1Q6BDS2 1440 aa15.69■□□□□ 0.1
TRAV29DV5-201ENST00000390458 CAMSAP2Q08AD1 1489 aa15.69■□□□□ 0.1
TRAV29DV5-201ENST00000390458 CCDC141Q6ZP82 1450 aa15.69■□□□□ 0.1
TRAV29DV5-201ENST00000390458 ARHGEF5Q12774 1597 aa15.68■□□□□ 0.1
TRAV29DV5-201ENST00000390458 RSPH4AQ5TD94 716 aa15.68■□□□□ 0.1
TRAV29DV5-201ENST00000390458 RNF216Q9NWF9 866 aaPredicted RBP15.68■□□□□ 0.1
TRAV29DV5-201ENST00000390458 LOC105371045A0A1W2PR82 267 aa15.67■□□□□ 0.1
TRAV29DV5-201ENST00000390458 NPATQ14207 1427 aa15.67■□□□□ 0.1
TRAV29DV5-201ENST00000390458 FAM135AQ9P2D6 1515 aa15.66■□□□□ 0.1
TRAV29DV5-201ENST00000390458 ZNF644Q9H582 1327 aaPredicted RBP15.66■□□□□ 0.1
TRAV29DV5-201ENST00000390458 CEBPAP49715 358 aaPredicted RBP15.65■□□□□ 0.1
TRAV29DV5-201ENST00000390458 HSPA2P54652 639 aa15.65■□□□□ 0.1
TRAV29DV5-201ENST00000390458 ILDR1Q86SU0 546 aaPredicted RBP15.65■□□□□ 0.1
TRAV29DV5-201ENST00000390458 CLTCQ00610 1675 aaKnown RBP15.63■□□□□ 0.09
TRAV29DV5-201ENST00000390458 MIA2Q96PC5 1412 aa15.62■□□□□ 0.09
TRAV29DV5-201ENST00000390458 MAST1Q9Y2H9 1570 aa15.61■□□□□ 0.09
TRAV29DV5-201ENST00000390458 DHX29Q7Z478 1369 aaKnown RBP15.61■□□□□ 0.09
TRAV29DV5-201ENST00000390458 STRCQ7RTU9 1775 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms