RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 RYDENQ9NUL5 291 aaKnown RBP6.56□□□□□ -1.36
RNU6-541P-201ENST00000384709 L3MBTL3Q96JM7 780 aaPredicted RBP6.55□□□□□ -1.36
RNU6-541P-201ENST00000384709 DPY19L2Q6NUT2 758 aa6.54□□□□□ -1.36
RNU6-541P-201ENST00000384709 RNF166Q96A37 237 aaPredicted RBP6.54□□□□□ -1.36
RNU6-541P-201ENST00000384709 PPP1R37O75864 691 aa6.5□□□□□ -1.37
RNU6-541P-201ENST00000384709 MICALL2Q8IY33 904 aa6.5□□□□□ -1.37
RNU6-541P-201ENST00000384709 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.5□□□□□ -1.37
RNU6-541P-201ENST00000384709 BOLA1Q9Y3E2 137 aa6.5□□□□□ -1.37
RNU6-541P-201ENST00000384709 HS3ST6Q96QI5 342 aa6.49□□□□□ -1.37
RNU6-541P-201ENST00000384709 EMP3P54852 163 aa6.48□□□□□ -1.37
RNU6-541P-201ENST00000384709 SNPHO15079 494 aa6.47□□□□□ -1.37
RNU6-541P-201ENST00000384709 SPRYD3Q8NCJ5 442 aa6.47□□□□□ -1.37
RNU6-541P-201ENST00000384709 FAM205CA6NFA0 338 aa6.46□□□□□ -1.38
RNU6-541P-201ENST00000384709 KIF3CO14782 793 aa6.45□□□□□ -1.38
RNU6-541P-201ENST00000384709 TMEM92Q6UXU6 159 aa6.44□□□□□ -1.38
RNU6-541P-201ENST00000384709 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.44□□□□□ -1.38
RNU6-541P-201ENST00000384709 PAXIP1Q6ZW49 1069 aaPredicted RBP6.43□□□□□ -1.38
RNU6-541P-201ENST00000384709 G3V3G9 751 aa6.42□□□□□ -1.38
RNU6-541P-201ENST00000384709 PLCB2Q00722 1185 aa6.42□□□□□ -1.38
RNU6-541P-201ENST00000384709 C3orf67Q6ZVT6 689 aa6.41□□□□□ -1.38
RNU6-541P-201ENST00000384709 CRISPLD2Q9H0B8 497 aa6.41□□□□□ -1.38
RNU6-541P-201ENST00000384709 MYT1LQ9UL68 1186 aa6.4□□□□□ -1.38
RNU6-541P-201ENST00000384709 CFAP44Q96MT7 982 aa6.39□□□□□ -1.39
RNU6-541P-201ENST00000384709 MFSD10Q14728 455 aa6.38□□□□□ -1.39
RNU6-541P-201ENST00000384709 GPHNQ9NQX3 736 aaPredicted RBP6.38□□□□□ -1.39
RNU6-541P-201ENST00000384709 NCKAP5LQ9HCH0 1330 aa6.37□□□□□ -1.39
RNU6-541P-201ENST00000384709 FOXK1P85037 733 aa6.37□□□□□ -1.39
RNU6-541P-201ENST00000384709 CADPS2Q86UW7 1296 aa6.37□□□□□ -1.39
RNU6-541P-201ENST00000384709 C2orf72A6NCS6 295 aa6.36□□□□□ -1.39
RNU6-541P-201ENST00000384709 SLC34A2O95436 690 aa6.35□□□□□ -1.39
RNU6-541P-201ENST00000384709 PDE4AP27815 886 aa6.35□□□□□ -1.39
RNU6-541P-201ENST00000384709 HOXB3P14651 431 aaPredicted RBP6.33□□□□□ -1.4
RNU6-541P-201ENST00000384709 TMC2Q8TDI7 906 aa6.33□□□□□ -1.4
RNU6-541P-201ENST00000384709 TSHZ2Q9NRE2 1034 aa6.33□□□□□ -1.4
RNU6-541P-201ENST00000384709 CAMK2BQ13554 666 aa6.31□□□□□ -1.4
RNU6-541P-201ENST00000384709 DSG2Q14126 1118 aa6.31□□□□□ -1.4
RNU6-541P-201ENST00000384709 ZSWIM6Q9HCJ5 1215 aa6.3□□□□□ -1.4
RNU6-541P-201ENST00000384709 DOK7Q18PE1 504 aa6.29□□□□□ -1.4
RNU6-541P-201ENST00000384709 PPP1R15BQ5SWA1 713 aa6.29□□□□□ -1.4
RNU6-541P-201ENST00000384709 PLPP6Q8IY26 295 aa6.29□□□□□ -1.4
RNU6-541P-201ENST00000384709 PTCD2Q8WV60 388 aaKnown RBP6.29□□□□□ -1.4
RNU6-541P-201ENST00000384709 DDX27Q96GQ7 796 aaKnown RBP6.29□□□□□ -1.4
RNU6-541P-201ENST00000384709 LARP6Q9BRS8 491 aaKnown RBP6.29□□□□□ -1.4
RNU6-541P-201ENST00000384709 PLA2G2EQ9NZK7 142 aa6.29□□□□□ -1.4
RNU6-541P-201ENST00000384709 ARIH1Q9Y4X5 557 aaPredicted RBP6.28□□□□□ -1.4
RNU6-541P-201ENST00000384709 KDM4FA0A1W2PPD8 638 aa6.26□□□□□ -1.41
RNU6-541P-201ENST00000384709 GPR153Q6NV75 609 aa6.26□□□□□ -1.41
RNU6-541P-201ENST00000384709 HOXB1P14653 301 aaPredicted RBP6.25□□□□□ -1.41
RNU6-541P-201ENST00000384709 VSIG10Q8N0Z9 540 aa6.25□□□□□ -1.41
RNU6-541P-201ENST00000384709 OXER1Q8TDS5 423 aa6.25□□□□□ -1.41
RNU6-541P-201ENST00000384709 RIMBP2O15034 1052 aa6.23□□□□□ -1.41
RNU6-541P-201ENST00000384709 HAP1P54257 671 aaPredicted RBP6.23□□□□□ -1.41
RNU6-541P-201ENST00000384709 EMILIN3Q9NT22 766 aa6.23□□□□□ -1.41
RNU6-541P-201ENST00000384709 KDM2AQ9Y2K7 1162 aa6.23□□□□□ -1.41
RNU6-541P-201ENST00000384709 PCDHGA4Q9Y5G9 962 aa6.22□□□□□ -1.41
RNU6-541P-201ENST00000384709 E2F4Q16254 413 aa6.21□□□□□ -1.42
RNU6-541P-201ENST00000384709 ANO8Q9HCE9 1232 aaPredicted RBP6.21□□□□□ -1.42
RNU6-541P-201ENST00000384709 WDR70Q9NW82 654 aa6.2□□□□□ -1.42
RNU6-541P-201ENST00000384709 TBC1D12O60347 775 aa6.19□□□□□ -1.42
RNU6-541P-201ENST00000384709 ZNF710Q8N1W2 664 aa6.19□□□□□ -1.42
RNU6-541P-201ENST00000384709 IRX2Q9BZI1 471 aaPredicted RBP6.19□□□□□ -1.42
RNU6-541P-201ENST00000384709 ARSIQ5FYB1 569 aa6.18□□□□□ -1.42
RNU6-541P-201ENST00000384709 PTGER2P43116 358 aa6.17□□□□□ -1.42
RNU6-541P-201ENST00000384709 ARHGEF1Q92888 912 aaKnown RBP6.17□□□□□ -1.42
RNU6-541P-201ENST00000384709 PDIA6Q15084 440 aa6.16□□□□□ -1.42
RNU6-541P-201ENST00000384709 P3H3Q8IVL6 736 aa6.16□□□□□ -1.42
RNU6-541P-201ENST00000384709 KCNV2Q8TDN2 545 aa6.16□□□□□ -1.42
RNU6-541P-201ENST00000384709 KHSRPQ92945 711 aaKnown RBP eCLIP6.16□□□□□ -1.42
RNU6-541P-201ENST00000384709 ZNF316A6NFI3 1004 aaPredicted RBP6.15□□□□□ -1.42
RNU6-541P-201ENST00000384709 SPDYE16A6NNV3 312 aaPredicted RBP6.15□□□□□ -1.42
RNU6-541P-201ENST00000384709 NUDT7P0C024 238 aa6.14□□□□□ -1.43
RNU6-541P-201ENST00000384709 MAP3K9P80192 1104 aa6.14□□□□□ -1.43
RNU6-541P-201ENST00000384709 UPF1Q92900 1129 aaKnown RBP eCLIP6.14□□□□□ -1.43
RNU6-541P-201ENST00000384709 DPYSL4O14531 572 aa6.13□□□□□ -1.43
RNU6-541P-201ENST00000384709 EVI5O60447 810 aa6.13□□□□□ -1.43
RNU6-541P-201ENST00000384709 ERBB3P21860 1342 aa6.13□□□□□ -1.43
RNU6-541P-201ENST00000384709 PSDA5PKW4 1024 aaPredicted RBP6.12□□□□□ -1.43
RNU6-541P-201ENST00000384709 SLC24A1O60721 1099 aa6.12□□□□□ -1.43
RNU6-541P-201ENST00000384709 LHX6Q9UPM6 363 aa6.12□□□□□ -1.43
RNU6-541P-201ENST00000384709 FOSBP53539 338 aa6.1□□□□□ -1.43
RNU6-541P-201ENST00000384709 ZNF687Q8N1G0 1237 aa6.1□□□□□ -1.43
RNU6-541P-201ENST00000384709 JPH4Q96JJ6 628 aa6.1□□□□□ -1.43
RNU6-541P-201ENST00000384709 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
RNU6-541P-201ENST00000384709 PHF14O94880 888 aa6.09□□□□□ -1.43
RNU6-541P-201ENST00000384709 KRTAP4-6Q9BYQ5 205 aa6.09□□□□□ -1.43
RNU6-541P-201ENST00000384709 VARS2Q5ST30 1063 aaKnown RBP6.07□□□□□ -1.44
RNU6-541P-201ENST00000384709 EPAS1Q99814 870 aa6.07□□□□□ -1.44
RNU6-541P-201ENST00000384709 PPP4R3BQ5MIZ7 849 aa6.06□□□□□ -1.44
RNU6-541P-201ENST00000384709 POTEEQ6S8J3 1075 aa6.06□□□□□ -1.44
RNU6-541P-201ENST00000384709 PCDHGA10Q9Y5H3 936 aa6.06□□□□□ -1.44
RNU6-541P-201ENST00000384709 FBXW7Q969H0 707 aa6.05□□□□□ -1.44
RNU6-541P-201ENST00000384709 BCL2L12Q9HB09 334 aa6.05□□□□□ -1.44
RNU6-541P-201ENST00000384709 TESPA1A2RU30 521 aaPredicted RBP6.04□□□□□ -1.44
RNU6-541P-201ENST00000384709 PBX2P40425 430 aa6.04□□□□□ -1.44
RNU6-541P-201ENST00000384709 TYW1BQ6NUM6 668 aa6.04□□□□□ -1.44
RNU6-541P-201ENST00000384709 ZDHHC16Q969W1 377 aa6.04□□□□□ -1.44
RNU6-541P-201ENST00000384709 ANKRD13DQ6ZTN6 518 aa6.03□□□□□ -1.44
RNU6-541P-201ENST00000384709 ZNF454Q8N9F8 522 aa6.03□□□□□ -1.44
RNU6-541P-201ENST00000384709 OSBPP22059 807 aa6.02□□□□□ -1.45
RNU6-541P-201ENST00000384709 EN1Q05925 392 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms