RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 ATMINO43313 823 aaPredicted RBP11.46□□□□□ -0.57
RNU6-40P-201ENST00000384254 EVX2Q03828 476 aa11.46□□□□□ -0.57
RNU6-40P-201ENST00000384254 DPY19L2Q6NUT2 758 aa11.46□□□□□ -0.57
RNU6-40P-201ENST00000384254 PLCG2P16885 1265 aa11.45□□□□□ -0.58
RNU6-40P-201ENST00000384254 ASTLQ6HA08 431 aaPredicted RBP11.45□□□□□ -0.58
RNU6-40P-201ENST00000384254 PDCD7Q8N8D1 485 aaKnown RBP11.44□□□□□ -0.58
RNU6-40P-201ENST00000384254 BOLA1Q9Y3E2 137 aa11.43□□□□□ -0.58
RNU6-40P-201ENST00000384254 IRX5P78411 483 aaPredicted RBP11.42□□□□□ -0.58
RNU6-40P-201ENST00000384254 L3MBTL3Q96JM7 780 aaPredicted RBP11.4□□□□□ -0.58
RNU6-40P-201ENST00000384254 DCBLD2Q96PD2 775 aa11.4□□□□□ -0.58
RNU6-40P-201ENST00000384254 SEC24BO95487 1268 aa11.39□□□□□ -0.59
RNU6-40P-201ENST00000384254 DSG2Q14126 1118 aa11.39□□□□□ -0.59
RNU6-40P-201ENST00000384254 ZC3H15Q8WU90 426 aaKnown RBP11.39□□□□□ -0.59
RNU6-40P-201ENST00000384254 FOXK1P85037 733 aa11.38□□□□□ -0.59
RNU6-40P-201ENST00000384254 SPDYE16A6NNV3 312 aaPredicted RBP11.36□□□□□ -0.59
RNU6-40P-201ENST00000384254 GABBR2O75899 941 aa11.36□□□□□ -0.59
RNU6-40P-201ENST00000384254 DPYSL4O14531 572 aa11.35□□□□□ -0.59
RNU6-40P-201ENST00000384254 TMEM121BQ9BXQ6 578 aaPredicted RBP11.35□□□□□ -0.59
RNU6-40P-201ENST00000384254 PLPP6Q8IY26 295 aa11.33□□□□□ -0.6
RNU6-40P-201ENST00000384254 C2orf72A6NCS6 295 aa11.32□□□□□ -0.6
RNU6-40P-201ENST00000384254 EMILIN3Q9NT22 766 aa11.32□□□□□ -0.6
RNU6-40P-201ENST00000384254 PDIA6Q15084 440 aa11.3□□□□□ -0.6
RNU6-40P-201ENST00000384254 GPIHBP1Q8IV16 184 aa11.3□□□□□ -0.6
RNU6-40P-201ENST00000384254 SLC39A7Q92504 469 aa11.3□□□□□ -0.6
RNU6-40P-201ENST00000384254 MLLT3P42568 568 aaPredicted RBP11.29□□□□□ -0.6
RNU6-40P-201ENST00000384254 MAP3K9P80192 1104 aa11.29□□□□□ -0.6
RNU6-40P-201ENST00000384254 KIF3CO14782 793 aa11.26□□□□□ -0.61
RNU6-40P-201ENST00000384254 C7P10643 843 aa11.26□□□□□ -0.61
RNU6-40P-201ENST00000384254 TMEM132AQ24JP5 1023 aa11.26□□□□□ -0.61
RNU6-40P-201ENST00000384254 RBM26Q5T8P6 1007 aaKnown RBP11.26□□□□□ -0.61
RNU6-40P-201ENST00000384254 SLC24A3Q9HC58 644 aa11.26□□□□□ -0.61
RNU6-40P-201ENST00000384254 ZMYND10O75800 440 aa11.25□□□□□ -0.61
RNU6-40P-201ENST00000384254 C3orf67Q6ZVT6 689 aa11.24□□□□□ -0.61
RNU6-40P-201ENST00000384254 COLQQ9Y215 455 aaPredicted RBP11.23□□□□□ -0.61
RNU6-40P-201ENST00000384254 ZNF316A6NFI3 1004 aaPredicted RBP11.22□□□□□ -0.61
RNU6-40P-201ENST00000384254 NEUROD2Q15784 382 aa11.22□□□□□ -0.61
RNU6-40P-201ENST00000384254 POTEHQ6S545 545 aa11.22□□□□□ -0.61
RNU6-40P-201ENST00000384254 PELP1Q8IZL8 1130 aaKnown RBP11.22□□□□□ -0.61
RNU6-40P-201ENST00000384254 KRI1Q8N9T8 703 aaKnown RBP11.22□□□□□ -0.61
RNU6-40P-201ENST00000384254 UPF1Q92900 1129 aaKnown RBP eCLIP11.22□□□□□ -0.61
RNU6-40P-201ENST00000384254 TBC1D12O60347 775 aa11.2□□□□□ -0.62
RNU6-40P-201ENST00000384254 BRPF1P55201 1214 aaPredicted RBP11.2□□□□□ -0.62
RNU6-40P-201ENST00000384254 BARGINQ6ZT62 677 aa11.2□□□□□ -0.62
RNU6-40P-201ENST00000384254 METRNQ9UJH8 293 aa11.2□□□□□ -0.62
RNU6-40P-201ENST00000384254 GRXCR2A6NFK2 248 aa11.18□□□□□ -0.62
RNU6-40P-201ENST00000384254 TMEM92Q6UXU6 159 aa11.16□□□□□ -0.62
RNU6-40P-201ENST00000384254 AK7Q96M32 723 aa11.16□□□□□ -0.62
RNU6-40P-201ENST00000384254 GTF3C3Q9Y5Q9 886 aa11.16□□□□□ -0.62
RNU6-40P-201ENST00000384254 OXER1Q8TDS5 423 aa11.15□□□□□ -0.62
RNU6-40P-201ENST00000384254 NUTM2FA1L443 756 aa11.13□□□□□ -0.63
RNU6-40P-201ENST00000384254 EVI5O60447 810 aa11.11□□□□□ -0.63
RNU6-40P-201ENST00000384254 POTEFA5A3E0 1075 aa11.1□□□□□ -0.63
RNU6-40P-201ENST00000384254 ERICH6Q7L0X2 663 aa11.1□□□□□ -0.63
RNU6-40P-201ENST00000384254 DDX12PQ92771 950 aa11.1□□□□□ -0.63
RNU6-40P-201ENST00000384254 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.1□□□□□ -0.63
RNU6-40P-201ENST00000384254 PTGER2P43116 358 aa11.09□□□□□ -0.63
RNU6-40P-201ENST00000384254 DAXXQ9UER7 740 aaPredicted RBP11.09□□□□□ -0.63
RNU6-40P-201ENST00000384254 SP7Q8TDD2 431 aaPredicted RBP11.08□□□□□ -0.64
RNU6-40P-201ENST00000384254 PTCD2Q8WV60 388 aaKnown RBP11.07□□□□□ -0.64
RNU6-40P-201ENST00000384254 OSBPP22059 807 aa11.06□□□□□ -0.64
RNU6-40P-201ENST00000384254 FCHSD2O94868 740 aa11.05□□□□□ -0.64
RNU6-40P-201ENST00000384254 SLC34A2O95436 690 aa11.05□□□□□ -0.64
RNU6-40P-201ENST00000384254 POTEIP0CG38 1075 aa11.04□□□□□ -0.64
RNU6-40P-201ENST00000384254 MINK1Q8N4C8 1332 aaPredicted RBP11.03□□□□□ -0.64
RNU6-40P-201ENST00000384254 TRIM66O15016 1216 aa11.01□□□□□ -0.65
RNU6-40P-201ENST00000384254 GNPATO15228 680 aa11.01□□□□□ -0.65
RNU6-40P-201ENST00000384254 GPR37O15354 613 aa11.01□□□□□ -0.65
RNU6-40P-201ENST00000384254 MAP2K5Q13163 448 aa11.01□□□□□ -0.65
RNU6-40P-201ENST00000384254 HIC1Q14526 733 aa11.01□□□□□ -0.65
RNU6-40P-201ENST00000384254 PDE4DQ08499 809 aa11□□□□□ -0.65
RNU6-40P-201ENST00000384254 EPAS1Q99814 870 aa10.98□□□□□ -0.65
RNU6-40P-201ENST00000384254 GPBP1L1Q9HC44 474 aaPredicted RBP10.98□□□□□ -0.65
RNU6-40P-201ENST00000384254 PHF14O94880 888 aa10.97□□□□□ -0.65
RNU6-40P-201ENST00000384254 KDM4CQ9H3R0 1056 aa10.97□□□□□ -0.65
RNU6-40P-201ENST00000384254 ANO8Q9HCE9 1232 aaPredicted RBP10.97□□□□□ -0.65
RNU6-40P-201ENST00000384254 CCDC102AQ96A19 550 aa10.96□□□□□ -0.65
RNU6-40P-201ENST00000384254 TIMELESSQ9UNS1 1208 aa10.96□□□□□ -0.65
RNU6-40P-201ENST00000384254 PCDHGA4Q9Y5G9 962 aa10.96□□□□□ -0.65
RNU6-40P-201ENST00000384254 IRF6O14896 467 aa10.95□□□□□ -0.66
RNU6-40P-201ENST00000384254 MAP3K7O43318 606 aa10.95□□□□□ -0.66
RNU6-40P-201ENST00000384254 PTGDRQ13258 359 aa10.94□□□□□ -0.66
RNU6-40P-201ENST00000384254 EN1Q05925 392 aaPredicted RBP10.93□□□□□ -0.66
RNU6-40P-201ENST00000384254 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
RNU6-40P-201ENST00000384254 C14orf37Q86TY3 774 aa10.92□□□□□ -0.66
RNU6-40P-201ENST00000384254 RIMBP2O15034 1052 aa10.91□□□□□ -0.66
RNU6-40P-201ENST00000384254 DOK7Q18PE1 504 aa10.91□□□□□ -0.66
RNU6-40P-201ENST00000384254 IL27Q8NEV9 243 aa10.91□□□□□ -0.66
RNU6-40P-201ENST00000384254 FBXW7Q969H0 707 aa10.91□□□□□ -0.66
RNU6-40P-201ENST00000384254 RBM33Q96EV2 1170 aaKnown RBP10.91□□□□□ -0.66
RNU6-40P-201ENST00000384254 PRIM1P49642 420 aaKnown RBP10.9□□□□□ -0.66
RNU6-40P-201ENST00000384254 SLAIN1Q8ND83 568 aa10.9□□□□□ -0.66
RNU6-40P-201ENST00000384254 TTLL12Q14166 644 aaPredicted RBP10.89□□□□□ -0.67
RNU6-40P-201ENST00000384254 JPH4Q96JJ6 628 aa10.89□□□□□ -0.67
RNU6-40P-201ENST00000384254 FECHP22830 423 aa10.88□□□□□ -0.67
RNU6-40P-201ENST00000384254 AMHR2Q16671 573 aa10.88□□□□□ -0.67
RNU6-40P-201ENST00000384254 PCDHGA10Q9Y5H3 936 aa10.88□□□□□ -0.67
RNU6-40P-201ENST00000384254 SCUBE2Q9NQ36 999 aa10.87□□□□□ -0.67
RNU6-40P-201ENST00000384254 DDRGK1Q96HY6 314 aa10.86□□□□□ -0.67
RNU6-40P-201ENST00000384254 CDHR5Q9HBB8 845 aa10.86□□□□□ -0.67
RNU6-40P-201ENST00000384254 MAMSTRQ6ZN01 415 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms