RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 PLCH2O75038 1416 aa29.25■■■□□ 2.27
COMMD6-202ENST00000377612 CDC42BPAQ5VT25 1732 aa29.25■■■□□ 2.27
COMMD6-202ENST00000377612 MADDQ8WXG6 1647 aa29.2■■■□□ 2.26
COMMD6-202ENST00000377612 POGZQ7Z3K3 1410 aa29.19■■■□□ 2.26
COMMD6-202ENST00000377612 ZFYVE16Q7Z3T8 1539 aa29.18■■■□□ 2.26
COMMD6-202ENST00000377612 HECW2Q9P2P5 1572 aa29.17■■■□□ 2.26
COMMD6-202ENST00000377612 ARHGAP5Q13017 1502 aa29.15■■■□□ 2.26
COMMD6-202ENST00000377612 ITSN2Q9NZM3 1697 aa29.15■■■□□ 2.26
COMMD6-202ENST00000377612 YEATS2Q9ULM3 1422 aa29.14■■■□□ 2.26
COMMD6-202ENST00000377612 SCAPERQ9BY12 1400 aa29.12■■■□□ 2.25
COMMD6-202ENST00000377612 RIMS1Q86UR5 1692 aaKnown RBP29.12■■■□□ 2.25
COMMD6-202ENST00000377612 CDK11AQ9UQ88 783 aaPredicted RBP29.12■■■□□ 2.25
COMMD6-202ENST00000377612 KDM5CP41229 1560 aa29.11■■■□□ 2.25
COMMD6-202ENST00000377612 ABCC1P33527 1531 aa29.09■■■□□ 2.25
COMMD6-202ENST00000377612 MAGI2Q86UL8 1455 aa29.07■■■□□ 2.24
COMMD6-202ENST00000377612 FER1L4A9Z1Z3 1794 aa29.06■■■□□ 2.24
COMMD6-202ENST00000377612 CEP162Q5TB80 1403 aa29.05■■■□□ 2.24
COMMD6-202ENST00000377612 PTPRMP28827 1452 aa29.04■■■□□ 2.24
COMMD6-202ENST00000377612 ABCA6Q8N139 1617 aa29.02■■■□□ 2.24
COMMD6-202ENST00000377612 SAMD9LQ8IVG5 1584 aa29.01■■■□□ 2.23
COMMD6-202ENST00000377612 ARHGEF12Q9NZN5 1544 aa29■■■□□ 2.23
COMMD6-202ENST00000377612 ZNF518AQ6AHZ1 1483 aa29■■■□□ 2.23
COMMD6-202ENST00000377612 EFCAB2Q5VUJ9 269 aa29■■■□□ 2.23
COMMD6-202ENST00000377612 DIP2CQ9Y2E4 1556 aa29■■■□□ 2.23
COMMD6-202ENST00000377612 KIDINS220Q9ULH0 1771 aa28.96■■■□□ 2.23
COMMD6-202ENST00000377612 ARID4BQ4LE39 1312 aaPredicted RBP28.93■■■□□ 2.22
COMMD6-202ENST00000377612 C9orf84Q5VXU9 1444 aa28.92■■■□□ 2.22
COMMD6-202ENST00000377612 TIAM1Q13009 1591 aa28.92■■■□□ 2.22
COMMD6-202ENST00000377612 EHBP1L1Q8N3D4 1523 aa28.91■■■□□ 2.22
COMMD6-202ENST00000377612 GPATCH8Q9UKJ3 1502 aaKnown RBP28.91■■■□□ 2.22
COMMD6-202ENST00000377612 TRAPPC8Q9Y2L5 1435 aa28.91■■■□□ 2.22
COMMD6-202ENST00000377612 REREQ9P2R6 1566 aa28.91■■■□□ 2.22
COMMD6-202ENST00000377612 ATP10AO60312 1499 aa28.91■■■□□ 2.22
COMMD6-202ENST00000377612 SYCP2Q9BX26 1530 aa28.9■■■□□ 2.22
COMMD6-202ENST00000377612 AFAP1Q8N556 730 aa28.86■■■□□ 2.21
COMMD6-202ENST00000377612 MLH3Q9UHC1 1453 aa28.85■■■□□ 2.21
COMMD6-202ENST00000377612 INO80Q9ULG1 1556 aaPredicted RBP28.81■■■□□ 2.2
COMMD6-202ENST00000377612 MTUS2Q5JR59 1369 aa28.8■■■□□ 2.2
COMMD6-202ENST00000377612 SUPT6HQ7KZ85 1726 aaKnown RBP28.8■■■□□ 2.2
COMMD6-202ENST00000377612 LMTK3Q96Q04 1460 aa28.79■■■□□ 2.2
COMMD6-202ENST00000377612 LOC105371045A0A1W2PR82 267 aa28.77■■■□□ 2.2
COMMD6-202ENST00000377612 MLECQ14165 292 aa28.74■■■□□ 2.19
COMMD6-202ENST00000377612 AGLP35573 1532 aa28.74■■■□□ 2.19
COMMD6-202ENST00000377612 ATP7AQ04656 1500 aa28.73■■■□□ 2.19
COMMD6-202ENST00000377612 CCNB3Q8WWL7 1395 aa28.73■■■□□ 2.19
COMMD6-202ENST00000377612 VPS8Q8N3P4 1428 aa28.72■■■□□ 2.19
COMMD6-202ENST00000377612 C3P01024 1663 aa28.72■■■□□ 2.19
COMMD6-202ENST00000377612 PREX1Q8TCU6 1659 aa28.71■■■□□ 2.19
COMMD6-202ENST00000377612 ZNF777Q9ULD5 760 aaPredicted RBP28.69■■■□□ 2.18
COMMD6-202ENST00000377612 PLEKHH2Q8IVE3 1493 aa28.69■■■□□ 2.18
COMMD6-202ENST00000377612 PLXNC1O60486 1568 aa28.69■■■□□ 2.18
COMMD6-202ENST00000377612 ADGBQ8N7X0 1667 aa28.68■■■□□ 2.18
COMMD6-202ENST00000377612 KIAA1107Q9UPP5 1409 aa28.68■■■□□ 2.18
COMMD6-202ENST00000377612 NCOA2Q15596 1464 aa28.67■■■□□ 2.18
COMMD6-202ENST00000377612 CFDP1Q9UEE9 299 aaPredicted RBP28.63■■■□□ 2.17
COMMD6-202ENST00000377612 MYT1LQ9UL68 1186 aa28.63■■■□□ 2.17
COMMD6-202ENST00000377612 MBD5Q9P267 1494 aa28.62■■■□□ 2.17
COMMD6-202ENST00000377612 HNRNPMP52272 730 aaKnown RBP eCLIP28.62■■■□□ 2.17
COMMD6-202ENST00000377612 PLPPR3Q6T4P5 718 aa28.61■■■□□ 2.17
COMMD6-202ENST00000377612 MROH2AA6NES4 1674 aa28.61■■■□□ 2.17
COMMD6-202ENST00000377612 CAMSAP2Q08AD1 1489 aa28.59■■■□□ 2.17
COMMD6-202ENST00000377612 LRRC9Q6ZRR7 1453 aa28.59■■■□□ 2.17
COMMD6-202ENST00000377612 ZNF644Q9H582 1327 aaPredicted RBP28.59■■■□□ 2.17
COMMD6-202ENST00000377612 CLTCQ00610 1675 aaKnown RBP28.57■■■□□ 2.16
COMMD6-202ENST00000377612 SETD1BQ9UPS6 1966 aaKnown RBP28.57■■■□□ 2.16
COMMD6-202ENST00000377612 MAP3K1Q13233 1512 aa28.56■■■□□ 2.16
COMMD6-202ENST00000377612 SPAG9O60271 1321 aaKnown RBP28.55■■■□□ 2.16
COMMD6-202ENST00000377612 A2MP01023 1474 aa28.52■■■□□ 2.16
COMMD6-202ENST00000377612 ARHGEF5Q12774 1597 aa28.51■■■□□ 2.15
COMMD6-202ENST00000377612 CEBPAP49715 358 aaPredicted RBP28.5■■■□□ 2.15
COMMD6-202ENST00000377612 STRCQ7RTU9 1775 aa28.5■■■□□ 2.15
COMMD6-202ENST00000377612 CCDC141Q6ZP82 1450 aa28.48■■■□□ 2.15
COMMD6-202ENST00000377612 HSPA2P54652 639 aa28.47■■■□□ 2.15
COMMD6-202ENST00000377612 RTEL1-TNFRSF6BF6WH68 1400 aa28.43■■■□□ 2.14
COMMD6-202ENST00000377612 KANK4Q5T7N3 995 aaPredicted RBP28.42■■■□□ 2.14
COMMD6-202ENST00000377612 CNTLNQ9NXG0 1405 aa28.42■■■□□ 2.14
COMMD6-202ENST00000377612 CROCC2H7BZ55 1655 aa28.41■■■□□ 2.14
COMMD6-202ENST00000377612 MAST1Q9Y2H9 1570 aa28.39■■■□□ 2.14
COMMD6-202ENST00000377612 MYO3AQ8NEV4 1616 aa28.38■■■□□ 2.13
COMMD6-202ENST00000377612 ZNF142P52746 1687 aaPredicted RBP28.37■■■□□ 2.13
COMMD6-202ENST00000377612 UHRF1BP1Q6BDS2 1440 aa28.36■■■□□ 2.13
COMMD6-202ENST00000377612 ILDR1Q86SU0 546 aaPredicted RBP28.36■■■□□ 2.13
COMMD6-202ENST00000377612 MYOM3Q5VTT5 1437 aa28.35■■■□□ 2.13
COMMD6-202ENST00000377612 PTPN23Q9H3S7 1636 aa28.3■■■□□ 2.12
COMMD6-202ENST00000377612 RNF17Q9BXT8 1623 aaKnown RBP28.29■■■□□ 2.12
COMMD6-202ENST00000377612 NPATQ14207 1427 aa28.28■■■□□ 2.12
COMMD6-202ENST00000377612 MIA2Q96PC5 1412 aa28.28■■■□□ 2.12
COMMD6-202ENST00000377612 DHX29Q7Z478 1369 aaKnown RBP28.28■■■□□ 2.12
COMMD6-202ENST00000377612 ZMYM3Q14202 1370 aa28.27■■■□□ 2.12
COMMD6-202ENST00000377612 EIF2AK4Q9P2K8 1649 aaKnown RBP28.26■■■□□ 2.11
COMMD6-202ENST00000377612 ESF1Q9H501 851 aaKnown RBP28.26■■■□□ 2.11
COMMD6-202ENST00000377612 PTPRKQ15262 1439 aa28.25■■■□□ 2.11
COMMD6-202ENST00000377612 KDM5DQ9BY66 1539 aa28.24■■■□□ 2.11
COMMD6-202ENST00000377612 MROH1Q8NDA8 1641 aa28.24■■■□□ 2.11
COMMD6-202ENST00000377612 FAM135AQ9P2D6 1515 aa28.23■■■□□ 2.11
COMMD6-202ENST00000377612 DNMT1P26358 1616 aaKnown RBP28.22■■■□□ 2.11
COMMD6-202ENST00000377612 GGT6Q6P531 493 aa28.22■■■□□ 2.11
COMMD6-202ENST00000377612 CEP170BQ9Y4F5 1589 aaPredicted RBP28.22■■■□□ 2.11
COMMD6-202ENST00000377612 CEP152O94986 1710 aa28.21■■■□□ 2.11
COMMD6-202ENST00000377612 ZC3H13Q5T200 1668 aaKnown RBP28.2■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms