RNA–Protein interactions for RNA: ENST00000370137.5

LRRC39-202, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC39, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-202ENST00000370137 BOLA1Q9Y3E2 137 aa10.79□□□□□ -0.68
LRRC39-202ENST00000370137 FBXO22Q8NEZ5 403 aa10.78□□□□□ -0.68
LRRC39-202ENST00000370137 MFRPQ9BY79 579 aa10.78□□□□□ -0.68
LRRC39-202ENST00000370137 NLRP6P59044 892 aa10.77□□□□□ -0.68
LRRC39-202ENST00000370137 HS6ST3Q8IZP7 471 aa10.77□□□□□ -0.68
LRRC39-202ENST00000370137 TMEM121BQ9BXQ6 578 aaPredicted RBP10.77□□□□□ -0.68
LRRC39-202ENST00000370137 C3orf67Q6ZVT6 689 aa10.77□□□□□ -0.69
LRRC39-202ENST00000370137 G3V3G9 751 aa10.74□□□□□ -0.69
LRRC39-202ENST00000370137 EIF5BO60841 1220 aaKnown RBP10.74□□□□□ -0.69
LRRC39-202ENST00000370137 SUPT5HO00267 1087 aaKnown RBP10.73□□□□□ -0.69
LRRC39-202ENST00000370137 CHGAP10645 457 aaKnown RBP10.72□□□□□ -0.69
LRRC39-202ENST00000370137 LCE2DQ5TA82 110 aaPredicted RBP10.72□□□□□ -0.69
LRRC39-202ENST00000370137 MICALL2Q8IY33 904 aa10.72□□□□□ -0.69
LRRC39-202ENST00000370137 TRIM26Q12899 539 aaPredicted RBP10.71□□□□□ -0.69
LRRC39-202ENST00000370137 DNAJC5Q9H3Z4 198 aa10.7□□□□□ -0.7
LRRC39-202ENST00000370137 FAM163AQ96GL9 167 aaPredicted RBP10.69□□□□□ -0.7
LRRC39-202ENST00000370137 SNPHO15079 494 aa10.64□□□□□ -0.71
LRRC39-202ENST00000370137 TMEM92Q6UXU6 159 aa10.64□□□□□ -0.71
LRRC39-202ENST00000370137 NBR1Q14596 966 aa10.63□□□□□ -0.71
LRRC39-202ENST00000370137 NKX1-1Q15270 411 aaPredicted RBP10.63□□□□□ -0.71
LRRC39-202ENST00000370137 ST18O60284 1047 aa10.62□□□□□ -0.71
LRRC39-202ENST00000370137 PPP1R37O75864 691 aa10.62□□□□□ -0.71
LRRC39-202ENST00000370137 POTEMA6NI47 508 aa10.61□□□□□ -0.71
LRRC39-202ENST00000370137 POTEGQ6S5H5 508 aa10.6□□□□□ -0.71
LRRC39-202ENST00000370137 UBTFP17480 764 aaKnown RBP10.59□□□□□ -0.71
LRRC39-202ENST00000370137 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.59□□□□□ -0.71
LRRC39-202ENST00000370137 PAXIP1Q6ZW49 1069 aaPredicted RBP10.58□□□□□ -0.72
LRRC39-202ENST00000370137 HOXB3P14651 431 aaPredicted RBP10.56□□□□□ -0.72
LRRC39-202ENST00000370137 CFAP44Q96MT7 982 aa10.55□□□□□ -0.72
LRRC39-202ENST00000370137 PLSCR2Q9NRY7 297 aa10.55□□□□□ -0.72
LRRC39-202ENST00000370137 HRCP23327 699 aa10.54□□□□□ -0.72
LRRC39-202ENST00000370137 KIF3CO14782 793 aa10.52□□□□□ -0.73
LRRC39-202ENST00000370137 RYDENQ9NUL5 291 aaKnown RBP10.52□□□□□ -0.73
LRRC39-202ENST00000370137 BBXQ8WY36 941 aaPredicted RBP10.51□□□□□ -0.73
LRRC39-202ENST00000370137 GTPBP6O43824 516 aaPredicted RBP10.5□□□□□ -0.73
LRRC39-202ENST00000370137 C2orf72A6NCS6 295 aa10.49□□□□□ -0.73
LRRC39-202ENST00000370137 DOK7Q18PE1 504 aa10.49□□□□□ -0.73
LRRC39-202ENST00000370137 TSHZ2Q9NRE2 1034 aa10.47□□□□□ -0.73
LRRC39-202ENST00000370137 MARVELD3Q96A59 401 aa10.45□□□□□ -0.74
LRRC39-202ENST00000370137 TMC2Q8TDI7 906 aa10.44□□□□□ -0.74
LRRC39-202ENST00000370137 HOXB1P14653 301 aaPredicted RBP10.43□□□□□ -0.74
LRRC39-202ENST00000370137 ZNF710Q8N1W2 664 aa10.43□□□□□ -0.74
LRRC39-202ENST00000370137 PCDH10Q9P2E7 1040 aa10.43□□□□□ -0.74
LRRC39-202ENST00000370137 RIMBP2O15034 1052 aa10.41□□□□□ -0.74
LRRC39-202ENST00000370137 ZSWIM6Q9HCJ5 1215 aa10.41□□□□□ -0.74
LRRC39-202ENST00000370137 EMP3P54852 163 aa10.4□□□□□ -0.74
LRRC39-202ENST00000370137 GPR153Q6NV75 609 aa10.39□□□□□ -0.75
LRRC39-202ENST00000370137 GPHNQ9NQX3 736 aaPredicted RBP10.39□□□□□ -0.75
LRRC39-202ENST00000370137 LOC105371045A0A1W2PR82 267 aa10.38□□□□□ -0.75
LRRC39-202ENST00000370137 CDAN1Q8IWY9 1227 aa10.38□□□□□ -0.75
LRRC39-202ENST00000370137 POTEB3A0JP26 581 aa10.37□□□□□ -0.75
LRRC39-202ENST00000370137 FOXK1P85037 733 aa10.37□□□□□ -0.75
LRRC39-202ENST00000370137 POTEBQ6S5H4 581 aa10.37□□□□□ -0.75
LRRC39-202ENST00000370137 SLC34A2O95436 690 aa10.36□□□□□ -0.75
LRRC39-202ENST00000370137 CRISPLD2Q9H0B8 497 aa10.36□□□□□ -0.75
LRRC39-202ENST00000370137 FAM205CA6NFA0 338 aa10.34□□□□□ -0.75
LRRC39-202ENST00000370137 DSG2Q14126 1118 aa10.34□□□□□ -0.75
LRRC39-202ENST00000370137 ARSIQ5FYB1 569 aa10.34□□□□□ -0.75
LRRC39-202ENST00000370137 HS3ST6Q96QI5 342 aa10.34□□□□□ -0.75
LRRC39-202ENST00000370137 PLPP6Q8IY26 295 aa10.33□□□□□ -0.76
LRRC39-202ENST00000370137 NCKAP5LQ9HCH0 1330 aa10.32□□□□□ -0.76
LRRC39-202ENST00000370137 SPRYD3Q8NCJ5 442 aa10.31□□□□□ -0.76
LRRC39-202ENST00000370137 KHSRPQ92945 711 aaKnown RBP eCLIP10.31□□□□□ -0.76
LRRC39-202ENST00000370137 PCDHGA4Q9Y5G9 962 aa10.3□□□□□ -0.76
LRRC39-202ENST00000370137 PDE4AP27815 886 aa10.29□□□□□ -0.76
LRRC39-202ENST00000370137 CCDC9Q9Y3X0 531 aaKnown RBP10.29□□□□□ -0.76
LRRC39-202ENST00000370137 ERBB3P21860 1342 aa10.29□□□□□ -0.76
LRRC39-202ENST00000370137 CADPS2Q86UW7 1296 aa10.28□□□□□ -0.76
LRRC39-202ENST00000370137 PTCD2Q8WV60 388 aaKnown RBP10.27□□□□□ -0.76
LRRC39-202ENST00000370137 PPP1R15BQ5SWA1 713 aa10.26□□□□□ -0.77
LRRC39-202ENST00000370137 MFSD10Q14728 455 aa10.25□□□□□ -0.77
LRRC39-202ENST00000370137 VARS2Q5ST30 1063 aaKnown RBP10.25□□□□□ -0.77
LRRC39-202ENST00000370137 ZNF316A6NFI3 1004 aaPredicted RBP10.24□□□□□ -0.77
LRRC39-202ENST00000370137 NUDT7P0C024 238 aa10.24□□□□□ -0.77
LRRC39-202ENST00000370137 LARP6Q9BRS8 491 aaKnown RBP10.24□□□□□ -0.77
LRRC39-202ENST00000370137 KDM4FA0A1W2PPD8 638 aa10.23□□□□□ -0.77
LRRC39-202ENST00000370137 KRTAP3-3Q9BYR6 98 aa10.23□□□□□ -0.77
LRRC39-202ENST00000370137 KRTAP3-2Q9BYR7 98 aa10.23□□□□□ -0.77
LRRC39-202ENST00000370137 DDX27Q96GQ7 796 aaKnown RBP10.21□□□□□ -0.78
LRRC39-202ENST00000370137 SHROOM4Q9ULL8 1493 aa10.2□□□□□ -0.78
LRRC39-202ENST00000370137 OXER1Q8TDS5 423 aa10.2□□□□□ -0.78
LRRC39-202ENST00000370137 ZNF687Q8N1G0 1237 aa10.19□□□□□ -0.78
LRRC39-202ENST00000370137 LHX6Q9UPM6 363 aa10.19□□□□□ -0.78
LRRC39-202ENST00000370137 TBC1D12O60347 775 aa10.18□□□□□ -0.78
LRRC39-202ENST00000370137 ZBTB7CA1YPR0 619 aa10.17□□□□□ -0.78
LRRC39-202ENST00000370137 CDK11BP21127 795 aaKnown RBP10.17□□□□□ -0.78
LRRC39-202ENST00000370137 CDK11AQ9UQ88 783 aaPredicted RBP10.17□□□□□ -0.78
LRRC39-202ENST00000370137 UPF1Q92900 1129 aaKnown RBP eCLIP10.16□□□□□ -0.78
LRRC39-202ENST00000370137 BRPF1P55201 1214 aaPredicted RBP10.14□□□□□ -0.79
LRRC39-202ENST00000370137 ARID3AQ99856 593 aa10.14□□□□□ -0.79
LRRC39-202ENST00000370137 HMGB1P09429 215 aaKnown RBP10.13□□□□□ -0.79
LRRC39-202ENST00000370137 SPNS2Q8IVW8 549 aa10.13□□□□□ -0.79
LRRC39-202ENST00000370137 EMILIN3Q9NT22 766 aa10.13□□□□□ -0.79
LRRC39-202ENST00000370137 CAMK2BQ13554 666 aa10.11□□□□□ -0.79
LRRC39-202ENST00000370137 PSDA5PKW4 1024 aaPredicted RBP10.1□□□□□ -0.79
LRRC39-202ENST00000370137 IGSF3O75054 1194 aa10.1□□□□□ -0.79
LRRC39-202ENST00000370137 POTEEQ6S8J3 1075 aa10.09□□□□□ -0.79
LRRC39-202ENST00000370137 ANO8Q9HCE9 1232 aaPredicted RBP10.08□□□□□ -0.8
LRRC39-202ENST00000370137 EVI5O60447 810 aa10.06□□□□□ -0.8
LRRC39-202ENST00000370137 MAP3K9P80192 1104 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms