RNA–Protein interactions for RNA: ENST00000364313.1

RNVU1-3-201, Transcript of RNA, variant U1 small nuclear 3, humanhuman

BASIC

Gene RNVU1-3, Length 161 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-3-201ENST00000364313 ILDR1Q86SU0 546 aaPredicted RBP7.21□□□□□ -1.26
RNVU1-3-201ENST00000364313 GPHNQ9NQX3 736 aaPredicted RBP7.21□□□□□ -1.26
RNVU1-3-201ENST00000364313 PODXL2Q9NZ53 605 aa7.21□□□□□ -1.26
RNVU1-3-201ENST00000364313 FXR2P51116 673 aaKnown RBP eCLIP7.2□□□□□ -1.26
RNVU1-3-201ENST00000364313 GPR37O15354 613 aa7.19□□□□□ -1.26
RNVU1-3-201ENST00000364313 GOPCQ9HD26 462 aa7.19□□□□□ -1.26
RNVU1-3-201ENST00000364313 MINK1Q8N4C8 1332 aaPredicted RBP7.19□□□□□ -1.26
RNVU1-3-201ENST00000364313 PRKAR2AP13861 404 aaKnown RBP7.18□□□□□ -1.26
RNVU1-3-201ENST00000364313 PPP1R15BQ5SWA1 713 aa7.18□□□□□ -1.26
RNVU1-3-201ENST00000364313 FLIIQ13045 1269 aa7.17□□□□□ -1.26
RNVU1-3-201ENST00000364313 DDRGK1Q96HY6 314 aa7.17□□□□□ -1.26
RNVU1-3-201ENST00000364313 MKRN3Q13064 507 aaKnown RBP7.15□□□□□ -1.26
RNVU1-3-201ENST00000364313 AMHR2Q16671 573 aa7.15□□□□□ -1.26
RNVU1-3-201ENST00000364313 FAM117AQ9C073 453 aa7.14□□□□□ -1.27
RNVU1-3-201ENST00000364313 EMILIN3Q9NT22 766 aa7.14□□□□□ -1.27
RNVU1-3-201ENST00000364313 PLEKHG3A1L390 1219 aa7.13□□□□□ -1.27
RNVU1-3-201ENST00000364313 MAP2K5Q13163 448 aa7.13□□□□□ -1.27
RNVU1-3-201ENST00000364313 IRF6O14896 467 aa7.12□□□□□ -1.27
RNVU1-3-201ENST00000364313 ONECUT3O60422 494 aaPredicted RBP7.12□□□□□ -1.27
RNVU1-3-201ENST00000364313 C1orf115Q9H7X2 142 aa7.12□□□□□ -1.27
RNVU1-3-201ENST00000364313 ZNF316A6NFI3 1004 aaPredicted RBP7.11□□□□□ -1.27
RNVU1-3-201ENST00000364313 A6NJR5 290 aa7.11□□□□□ -1.27
RNVU1-3-201ENST00000364313 DPYSL4O14531 572 aa7.11□□□□□ -1.27
RNVU1-3-201ENST00000364313 FOXK1P85037 733 aa7.11□□□□□ -1.27
RNVU1-3-201ENST00000364313 GOLGA2Q08379 1002 aa7.11□□□□□ -1.27
RNVU1-3-201ENST00000364313 TRIM26Q12899 539 aaPredicted RBP7.11□□□□□ -1.27
RNVU1-3-201ENST00000364313 HRCP23327 699 aa7.1□□□□□ -1.27
RNVU1-3-201ENST00000364313 TMEM106CQ9BVX2 250 aa7.09□□□□□ -1.27
RNVU1-3-201ENST00000364313 PTGER2P43116 358 aa7.08□□□□□ -1.28
RNVU1-3-201ENST00000364313 DSG2Q14126 1118 aa7.08□□□□□ -1.28
RNVU1-3-201ENST00000364313 GNPATO15228 680 aa7.07□□□□□ -1.28
RNVU1-3-201ENST00000364313 HIC1Q14526 733 aa7.07□□□□□ -1.28
RNVU1-3-201ENST00000364313 PARP9Q8IXQ6 854 aa7.07□□□□□ -1.28
RNVU1-3-201ENST00000364313 CCDC102AQ96A19 550 aa7.07□□□□□ -1.28
RNVU1-3-201ENST00000364313 TIE1P35590 1138 aa7.06□□□□□ -1.28
RNVU1-3-201ENST00000364313 RANGAP1P46060 587 aaPredicted RBP7.06□□□□□ -1.28
RNVU1-3-201ENST00000364313 ZRANB1Q9UGI0 708 aa7.05□□□□□ -1.28
RNVU1-3-201ENST00000364313 OSBPP22059 807 aa7.04□□□□□ -1.28
RNVU1-3-201ENST00000364313 APBB1O00213 710 aa7.03□□□□□ -1.28
RNVU1-3-201ENST00000364313 KIF3CO14782 793 aa7.03□□□□□ -1.28
RNVU1-3-201ENST00000364313 FCHSD2O94868 740 aa7.03□□□□□ -1.28
RNVU1-3-201ENST00000364313 TMEM121BQ9BXQ6 578 aaPredicted RBP7.03□□□□□ -1.28
RNVU1-3-201ENST00000364313 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.03□□□□□ -1.28
RNVU1-3-201ENST00000364313 PHF12Q96QT6 1004 aa7.02□□□□□ -1.29
RNVU1-3-201ENST00000364313 TRAK2O60296 914 aa7.01□□□□□ -1.29
RNVU1-3-201ENST00000364313 CD44P16070 742 aaKnown RBP7.01□□□□□ -1.29
RNVU1-3-201ENST00000364313 PLPP6Q8IY26 295 aa7.01□□□□□ -1.29
RNVU1-3-201ENST00000364313 MICALL2Q8IY33 904 aa7.01□□□□□ -1.29
RNVU1-3-201ENST00000364313 TMC2Q8TDI7 906 aa7.01□□□□□ -1.29
RNVU1-3-201ENST00000364313 TRPC6Q9Y210 931 aa7.01□□□□□ -1.29
RNVU1-3-201ENST00000364313 NUTM2FA1L443 756 aa7□□□□□ -1.29
RNVU1-3-201ENST00000364313 PIP4P2Q8N4L2 257 aa7□□□□□ -1.29
RNVU1-3-201ENST00000364313 TTLL13PA6NNM8 815 aa6.99□□□□□ -1.29
RNVU1-3-201ENST00000364313 SH3D19Q5HYK7 790 aa6.99□□□□□ -1.29
RNVU1-3-201ENST00000364313 MS4A3Q96HJ5 214 aa6.99□□□□□ -1.29
RNVU1-3-201ENST00000364313 TMUB1Q9BVT8 246 aa6.99□□□□□ -1.29
RNVU1-3-201ENST00000364313 GRXCR2A6NFK2 248 aa6.98□□□□□ -1.29
RNVU1-3-201ENST00000364313 PDIA4P13667 645 aaKnown RBP6.98□□□□□ -1.29
RNVU1-3-201ENST00000364313 MAP3K9P80192 1104 aa6.98□□□□□ -1.29
RNVU1-3-201ENST00000364313 PCMTD1Q96MG8 357 aaPredicted RBP6.98□□□□□ -1.29
RNVU1-3-201ENST00000364313 ARID3CA6NKF2 412 aa6.97□□□□□ -1.29
RNVU1-3-201ENST00000364313 PTGDRQ13258 359 aa6.97□□□□□ -1.29
RNVU1-3-201ENST00000364313 OXER1Q8TDS5 423 aa6.97□□□□□ -1.29
RNVU1-3-201ENST00000364313 ARID3AQ99856 593 aa6.97□□□□□ -1.29
RNVU1-3-201ENST00000364313 FECHP22830 423 aa6.96□□□□□ -1.3
RNVU1-3-201ENST00000364313 MCM6Q14566 821 aa6.96□□□□□ -1.3
RNVU1-3-201ENST00000364313 GIGYF2Q6Y7W6 1299 aaKnown RBP6.96□□□□□ -1.3
RNVU1-3-201ENST00000364313 NPM2Q86SE8 214 aaKnown RBP6.96□□□□□ -1.3
RNVU1-3-201ENST00000364313 PDCD7Q8N8D1 485 aaKnown RBP6.96□□□□□ -1.3
RNVU1-3-201ENST00000364313 ZBTB7CA1YPR0 619 aa6.95□□□□□ -1.3
RNVU1-3-201ENST00000364313 C2orf72A6NCS6 295 aa6.95□□□□□ -1.3
RNVU1-3-201ENST00000364313 MS4A1P11836 297 aa6.95□□□□□ -1.3
RNVU1-3-201ENST00000364313 CHRDL2Q6WN34 429 aa6.95□□□□□ -1.3
RNVU1-3-201ENST00000364313 FNBP4Q8N3X1 1017 aaPredicted RBP6.95□□□□□ -1.3
RNVU1-3-201ENST00000364313 TTLL12Q14166 644 aaPredicted RBP6.94□□□□□ -1.3
RNVU1-3-201ENST00000364313 SKIV2LQ15477 1246 aaKnown RBP6.94□□□□□ -1.3
RNVU1-3-201ENST00000364313 DPY19L2Q6NUT2 758 aa6.94□□□□□ -1.3
RNVU1-3-201ENST00000364313 CCDC82Q8N4S0 544 aa6.94□□□□□ -1.3
RNVU1-3-201ENST00000364313 TRAIPQ9BWF2 469 aa6.94□□□□□ -1.3
RNVU1-3-201ENST00000364313 BMP2KQ9NSY1 1161 aaPredicted RBP6.94□□□□□ -1.3
RNVU1-3-201ENST00000364313 CLUAP1Q96AJ1 413 aa6.93□□□□□ -1.3
RNVU1-3-201ENST00000364313 CCDC9Q9Y3X0 531 aaKnown RBP6.93□□□□□ -1.3
RNVU1-3-201ENST00000364313 TBC1D12O60347 775 aa6.92□□□□□ -1.3
RNVU1-3-201ENST00000364313 CLCN1P35523 988 aa6.92□□□□□ -1.3
RNVU1-3-201ENST00000364313 CLCN6P51797 869 aa6.92□□□□□ -1.3
RNVU1-3-201ENST00000364313 REPIN1Q9BWE0 567 aaKnown RBP6.92□□□□□ -1.3
RNVU1-3-201ENST00000364313 TRIM35Q9UPQ4 493 aa6.92□□□□□ -1.3
RNVU1-3-201ENST00000364313 C19orf67A6NJJ6 358 aa6.91□□□□□ -1.3
RNVU1-3-201ENST00000364313 ANO8Q9HCE9 1232 aaPredicted RBP6.91□□□□□ -1.3
RNVU1-3-201ENST00000364313 SERPINA10Q9UK55 444 aa6.91□□□□□ -1.3
RNVU1-3-201ENST00000364313 BOLA1Q9Y3E2 137 aa6.91□□□□□ -1.3
RNVU1-3-201ENST00000364313 PRIM1P49642 420 aaKnown RBP6.9□□□□□ -1.3
RNVU1-3-201ENST00000364313 IRX5P78411 483 aaPredicted RBP6.9□□□□□ -1.3
RNVU1-3-201ENST00000364313 IER5LQ5T953 404 aa6.9□□□□□ -1.3
RNVU1-3-201ENST00000364313 PROSER2Q86WR7 435 aaPredicted RBP6.9□□□□□ -1.3
RNVU1-3-201ENST00000364313 NECTIN2Q92692 538 aa6.9□□□□□ -1.3
RNVU1-3-201ENST00000364313 GPCPD1Q9NPB8 672 aa6.9□□□□□ -1.3
RNVU1-3-201ENST00000364313 KCTD17Q8N5Z5 321 aa6.89□□□□□ -1.31
RNVU1-3-201ENST00000364313 OCEL1Q9H607 264 aa6.89□□□□□ -1.31
RNVU1-3-201ENST00000364313 NPDC1Q9NQX5 325 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms