RNA–Protein interactions for RNA: ENST00000362839.1

RNU4-23P-201, Transcript of RNA, U4 small nuclear 23, pseudogene, humanhuman

BASIC

Gene RNU4-23P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-23P-201ENST00000362839 ATMINO43313 823 aaPredicted RBP12.85□□□□□ -0.35
RNU4-23P-201ENST00000362839 IRX5P78411 483 aaPredicted RBP12.85□□□□□ -0.35
RNU4-23P-201ENST00000362839 DSG2Q14126 1118 aa12.84□□□□□ -0.35
RNU4-23P-201ENST00000362839 ASTLQ6HA08 431 aaPredicted RBP12.84□□□□□ -0.35
RNU4-23P-201ENST00000362839 IER5LQ5T953 404 aa12.81□□□□□ -0.36
RNU4-23P-201ENST00000362839 TMEM121BQ9BXQ6 578 aaPredicted RBP12.81□□□□□ -0.36
RNU4-23P-201ENST00000362839 OCEL1Q9H607 264 aa12.81□□□□□ -0.36
RNU4-23P-201ENST00000362839 EMILIN3Q9NT22 766 aa12.81□□□□□ -0.36
RNU4-23P-201ENST00000362839 TMC2Q8TDI7 906 aa12.8□□□□□ -0.36
RNU4-23P-201ENST00000362839 MLLT3P42568 568 aaPredicted RBP12.79□□□□□ -0.36
RNU4-23P-201ENST00000362839 FOXK1P85037 733 aa12.79□□□□□ -0.36
RNU4-23P-201ENST00000362839 TMEM132AQ24JP5 1023 aa12.79□□□□□ -0.36
RNU4-23P-201ENST00000362839 DPYSL4O14531 572 aa12.78□□□□□ -0.36
RNU4-23P-201ENST00000362839 ZMYND10O75800 440 aa12.78□□□□□ -0.36
RNU4-23P-201ENST00000362839 BOLA1Q9Y3E2 137 aa12.78□□□□□ -0.36
RNU4-23P-201ENST00000362839 SLC24A3Q9HC58 644 aa12.77□□□□□ -0.37
RNU4-23P-201ENST00000362839 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
RNU4-23P-201ENST00000362839 KIF3CO14782 793 aa12.74□□□□□ -0.37
RNU4-23P-201ENST00000362839 RBM26Q5T8P6 1007 aaKnown RBP12.74□□□□□ -0.37
RNU4-23P-201ENST00000362839 C2orf72A6NCS6 295 aa12.73□□□□□ -0.37
RNU4-23P-201ENST00000362839 SPDYE16A6NNV3 312 aaPredicted RBP12.73□□□□□ -0.37
RNU4-23P-201ENST00000362839 PDIA6Q15084 440 aa12.73□□□□□ -0.37
RNU4-23P-201ENST00000362839 PLPP6Q8IY26 295 aa12.73□□□□□ -0.37
RNU4-23P-201ENST00000362839 GTF3C3Q9Y5Q9 886 aa12.73□□□□□ -0.37
RNU4-23P-201ENST00000362839 G3V3G9 751 aa12.71□□□□□ -0.37
RNU4-23P-201ENST00000362839 PLCG2P16885 1265 aa12.71□□□□□ -0.37
RNU4-23P-201ENST00000362839 GABBR2O75899 941 aa12.7□□□□□ -0.38
RNU4-23P-201ENST00000362839 BARGINQ6ZT62 677 aa12.7□□□□□ -0.38
RNU4-23P-201ENST00000362839 GPIHBP1Q8IV16 184 aa12.68□□□□□ -0.38
RNU4-23P-201ENST00000362839 PELP1Q8IZL8 1130 aaKnown RBP12.67□□□□□ -0.38
RNU4-23P-201ENST00000362839 L3MBTL3Q96JM7 780 aaPredicted RBP12.67□□□□□ -0.38
RNU4-23P-201ENST00000362839 NEUROD2Q15784 382 aa12.66□□□□□ -0.38
RNU4-23P-201ENST00000362839 TMEM92Q6UXU6 159 aa12.65□□□□□ -0.38
RNU4-23P-201ENST00000362839 COLQQ9Y215 455 aaPredicted RBP12.65□□□□□ -0.38
RNU4-23P-201ENST00000362839 SEC24BO95487 1268 aa12.62□□□□□ -0.39
RNU4-23P-201ENST00000362839 MAP3K9P80192 1104 aa12.62□□□□□ -0.39
RNU4-23P-201ENST00000362839 DCBLD2Q96PD2 775 aa12.61□□□□□ -0.39
RNU4-23P-201ENST00000362839 TIMELESSQ9UNS1 1208 aa12.6□□□□□ -0.39
RNU4-23P-201ENST00000362839 KRI1Q8N9T8 703 aaKnown RBP12.58□□□□□ -0.4
RNU4-23P-201ENST00000362839 UPF1Q92900 1129 aaKnown RBP eCLIP12.58□□□□□ -0.4
RNU4-23P-201ENST00000362839 AK7Q96M32 723 aa12.58□□□□□ -0.4
RNU4-23P-201ENST00000362839 POTEFA5A3E0 1075 aa12.56□□□□□ -0.4
RNU4-23P-201ENST00000362839 GRXCR2A6NFK2 248 aa12.56□□□□□ -0.4
RNU4-23P-201ENST00000362839 OXER1Q8TDS5 423 aa12.56□□□□□ -0.4
RNU4-23P-201ENST00000362839 SLC39A7Q92504 469 aa12.56□□□□□ -0.4
RNU4-23P-201ENST00000362839 GPR37O15354 613 aa12.54□□□□□ -0.4
RNU4-23P-201ENST00000362839 C7P10643 843 aa12.53□□□□□ -0.4
RNU4-23P-201ENST00000362839 OSBPP22059 807 aa12.51□□□□□ -0.41
RNU4-23P-201ENST00000362839 PTGER2P43116 358 aa12.51□□□□□ -0.41
RNU4-23P-201ENST00000362839 METRNQ9UJH8 293 aa12.49□□□□□ -0.41
RNU4-23P-201ENST00000362839 TRIM66O15016 1216 aa12.48□□□□□ -0.41
RNU4-23P-201ENST00000362839 TBC1D12O60347 775 aa12.48□□□□□ -0.41
RNU4-23P-201ENST00000362839 DDX12PQ92771 950 aa12.48□□□□□ -0.41
RNU4-23P-201ENST00000362839 GPBP1L1Q9HC44 474 aaPredicted RBP12.48□□□□□ -0.41
RNU4-23P-201ENST00000362839 NUTM2FA1L443 756 aa12.47□□□□□ -0.41
RNU4-23P-201ENST00000362839 EVI5O60447 810 aa12.46□□□□□ -0.41
RNU4-23P-201ENST00000362839 POTEIP0CG38 1075 aa12.46□□□□□ -0.41
RNU4-23P-201ENST00000362839 ERICH6Q7L0X2 663 aa12.46□□□□□ -0.41
RNU4-23P-201ENST00000362839 PTCD2Q8WV60 388 aaKnown RBP12.45□□□□□ -0.42
RNU4-23P-201ENST00000362839 POTEHQ6S545 545 aa12.44□□□□□ -0.42
RNU4-23P-201ENST00000362839 C3orf67Q6ZVT6 689 aa12.44□□□□□ -0.42
RNU4-23P-201ENST00000362839 PDE4DQ08499 809 aa12.43□□□□□ -0.42
RNU4-23P-201ENST00000362839 MINK1Q8N4C8 1332 aaPredicted RBP12.42□□□□□ -0.42
RNU4-23P-201ENST00000362839 PRIM1P49642 420 aaKnown RBP12.42□□□□□ -0.42
RNU4-23P-201ENST00000362839 SLC34A2O95436 690 aa12.41□□□□□ -0.42
RNU4-23P-201ENST00000362839 KDM4CQ9H3R0 1056 aa12.41□□□□□ -0.42
RNU4-23P-201ENST00000362839 GNPATO15228 680 aa12.39□□□□□ -0.43
RNU4-23P-201ENST00000362839 MAP2K5Q13163 448 aa12.39□□□□□ -0.43
RNU4-23P-201ENST00000362839 IRF6O14896 467 aa12.38□□□□□ -0.43
RNU4-23P-201ENST00000362839 FCHSD2O94868 740 aa12.38□□□□□ -0.43
RNU4-23P-201ENST00000362839 ANO8Q9HCE9 1232 aaPredicted RBP12.38□□□□□ -0.43
RNU4-23P-201ENST00000362839 HIC1Q14526 733 aa12.37□□□□□ -0.43
RNU4-23P-201ENST00000362839 ZNF316A6NFI3 1004 aaPredicted RBP12.36□□□□□ -0.43
RNU4-23P-201ENST00000362839 FECHP22830 423 aa12.36□□□□□ -0.43
RNU4-23P-201ENST00000362839 C14orf37Q86TY3 774 aa12.36□□□□□ -0.43
RNU4-23P-201ENST00000362839 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
RNU4-23P-201ENST00000362839 CCDC102AQ96A19 550 aa12.36□□□□□ -0.43
RNU4-23P-201ENST00000362839 PTGDRQ13258 359 aa12.34□□□□□ -0.43
RNU4-23P-201ENST00000362839 DAXXQ9UER7 740 aaPredicted RBP12.34□□□□□ -0.43
RNU4-23P-201ENST00000362839 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.32□□□□□ -0.44
RNU4-23P-201ENST00000362839 AMHR2Q16671 573 aa12.3□□□□□ -0.44
RNU4-23P-201ENST00000362839 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
RNU4-23P-201ENST00000362839 PHF14O94880 888 aa12.29□□□□□ -0.44
RNU4-23P-201ENST00000362839 EN1Q05925 392 aaPredicted RBP12.28□□□□□ -0.44
RNU4-23P-201ENST00000362839 EPAS1Q99814 870 aa12.28□□□□□ -0.44
RNU4-23P-201ENST00000362839 PCDHGA4Q9Y5G9 962 aa12.28□□□□□ -0.44
RNU4-23P-201ENST00000362839 FAM117AQ9C073 453 aa12.27□□□□□ -0.45
RNU4-23P-201ENST00000362839 NPDC1Q9NQX5 325 aaPredicted RBP12.27□□□□□ -0.45
RNU4-23P-201ENST00000362839 PARP9Q8IXQ6 854 aa12.26□□□□□ -0.45
RNU4-23P-201ENST00000362839 CDHR5Q9HBB8 845 aa12.26□□□□□ -0.45
RNU4-23P-201ENST00000362839 PCDHGA10Q9Y5H3 936 aa12.26□□□□□ -0.45
RNU4-23P-201ENST00000362839 KDM4FA0A1W2PPD8 638 aa12.24□□□□□ -0.45
RNU4-23P-201ENST00000362839 MAP3K7O43318 606 aa12.24□□□□□ -0.45
RNU4-23P-201ENST00000362839 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
RNU4-23P-201ENST00000362839 SLAIN1Q8ND83 568 aa12.22□□□□□ -0.45
RNU4-23P-201ENST00000362839 PLEKHG3A1L390 1219 aa12.21□□□□□ -0.45
RNU4-23P-201ENST00000362839 TYW1BQ6NUM6 668 aa12.21□□□□□ -0.45
RNU4-23P-201ENST00000362839 TSR1Q2NL82 804 aaKnown RBP12.2□□□□□ -0.46
RNU4-23P-201ENST00000362839 DDRGK1Q96HY6 314 aa12.2□□□□□ -0.46
RNU4-23P-201ENST00000362839 JPH4Q96JJ6 628 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms