RNA–Protein interactions for RNA: ENST00000355327.7

THSD4-202, Transcript of thrombospondin type 1 domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene THSD4, Length 9,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-202ENST00000355327 ACBD3Q9H3P7 528 aa17.54■□□□□ 0.4
THSD4-202ENST00000355327 NEXNQ0ZGT2 675 aa17.54■□□□□ 0.4
THSD4-202ENST00000355327 ARGLU1Q9NWB6 273 aaPredicted RBP17.53■□□□□ 0.4
THSD4-202ENST00000355327 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
THSD4-202ENST00000355327 ZNF592Q92610 1267 aa17.53■□□□□ 0.4
THSD4-202ENST00000355327 TSR1Q2NL82 804 aaKnown RBP17.52■□□□□ 0.4
THSD4-202ENST00000355327 OS9Q13438 667 aaPredicted RBP17.51■□□□□ 0.39
THSD4-202ENST00000355327 DDX11L8A8MPP1 907 aa17.51■□□□□ 0.39
THSD4-202ENST00000355327 GSE1Q14687 1217 aa17.5■□□□□ 0.39
THSD4-202ENST00000355327 IPO9Q96P70 1041 aaKnown RBP17.49■□□□□ 0.39
THSD4-202ENST00000355327 LEKR1Q6ZMV7 388 aa17.48■□□□□ 0.39
THSD4-202ENST00000355327 CREBRFQ8IUR6 639 aa17.48■□□□□ 0.39
THSD4-202ENST00000355327 FAM43AQ8N2R8 423 aa17.47■□□□□ 0.39
THSD4-202ENST00000355327 USP8P40818 1118 aa17.47■□□□□ 0.39
THSD4-202ENST00000355327 A0A0G2JS52 829 aa17.45■□□□□ 0.38
THSD4-202ENST00000355327 BCCIPQ9P287 314 aaKnown RBP eCLIP17.45■□□□□ 0.38
THSD4-202ENST00000355327 GOLGA2Q08379 1002 aa17.45■□□□□ 0.38
THSD4-202ENST00000355327 ZRSR2Q15696 482 aaKnown RBP17.45■□□□□ 0.38
THSD4-202ENST00000355327 MS4A1P11836 297 aa17.45■□□□□ 0.38
THSD4-202ENST00000355327 TPM1P09493 284 aa17.44■□□□□ 0.38
THSD4-202ENST00000355327 AEBP1Q8IUX7 1158 aa17.44■□□□□ 0.38
THSD4-202ENST00000355327 CCDC180Q9P1Z9 1646 aa17.44■□□□□ 0.38
THSD4-202ENST00000355327 KIAA1211Q6ZU35 1233 aa17.43■□□□□ 0.38
THSD4-202ENST00000355327 GOLGA6L19H0YKK7 550 aa17.43■□□□□ 0.38
THSD4-202ENST00000355327 C14orf37Q86TY3 774 aa17.43■□□□□ 0.38
THSD4-202ENST00000355327 GIMAP7Q8NHV1 300 aa17.43■□□□□ 0.38
THSD4-202ENST00000355327 KIF16BQ96L93 1317 aa17.43■□□□□ 0.38
THSD4-202ENST00000355327 TSPYL1Q9H0U9 437 aa17.41■□□□□ 0.38
THSD4-202ENST00000355327 GOLGA6L7A0A1B0GV03 622 aa17.41■□□□□ 0.38
THSD4-202ENST00000355327 KIF3AQ9Y496 699 aa17.41■□□□□ 0.38
THSD4-202ENST00000355327 ANO8Q9HCE9 1232 aaPredicted RBP17.41■□□□□ 0.38
THSD4-202ENST00000355327 RSPH4AQ5TD94 716 aa17.4■□□□□ 0.38
THSD4-202ENST00000355327 FRAT1Q92837 279 aaPredicted RBP17.4■□□□□ 0.38
THSD4-202ENST00000355327 TPM2P07951 284 aa17.4■□□□□ 0.38
THSD4-202ENST00000355327 PES1O00541 588 aaKnown RBP17.39■□□□□ 0.37
THSD4-202ENST00000355327 KIAA0754O94854 1291 aa17.38■□□□□ 0.37
THSD4-202ENST00000355327 HOMER1Q86YM7 354 aa17.38■□□□□ 0.37
THSD4-202ENST00000355327 HMGB1P09429 215 aaKnown RBP17.38■□□□□ 0.37
THSD4-202ENST00000355327 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.37■□□□□ 0.37
THSD4-202ENST00000355327 CC2D1BQ5T0F9 858 aaKnown RBP17.37■□□□□ 0.37
THSD4-202ENST00000355327 CLASRPQ8N2M8 674 aaKnown RBP17.37■□□□□ 0.37
THSD4-202ENST00000355327 IPO7O95373 1038 aaKnown RBP17.36■□□□□ 0.37
THSD4-202ENST00000355327 SKOR2Q2VWA4 1001 aaPredicted RBP17.35■□□□□ 0.37
THSD4-202ENST00000355327 TPD52L1Q16890 204 aaPredicted RBP17.34■□□□□ 0.37
THSD4-202ENST00000355327 STAG3Q9UJ98 1225 aa17.34■□□□□ 0.37
THSD4-202ENST00000355327 RRP9O43818 475 aaKnown RBP17.34■□□□□ 0.37
THSD4-202ENST00000355327 RBM25P49756 843 aaKnown RBP17.34■□□□□ 0.37
THSD4-202ENST00000355327 RASSF8Q8NHQ8 419 aa17.34■□□□□ 0.37
THSD4-202ENST00000355327 ISY1Q9ULR0 285 aaKnown RBP17.32■□□□□ 0.36
THSD4-202ENST00000355327 CAGE1Q8TC20 777 aa17.32■□□□□ 0.36
THSD4-202ENST00000355327 DIAPH3Q9NSV4 1193 aa17.32■□□□□ 0.36
THSD4-202ENST00000355327 MNS1Q8NEH6 495 aa17.31■□□□□ 0.36
THSD4-202ENST00000355327 CFAP53Q96M91 514 aa17.31■□□□□ 0.36
THSD4-202ENST00000355327 DCAF1Q9Y4B6 1507 aa17.31■□□□□ 0.36
THSD4-202ENST00000355327 BECN2A8MW95 431 aa17.3■□□□□ 0.36
THSD4-202ENST00000355327 ERCC4Q92889 916 aaPredicted RBP17.3■□□□□ 0.36
THSD4-202ENST00000355327 RALBP1Q15311 655 aa17.3■□□□□ 0.36
THSD4-202ENST00000355327 GPATCH11Q8N954 259 aa17.29■□□□□ 0.36
THSD4-202ENST00000355327 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.29■□□□□ 0.36
THSD4-202ENST00000355327 CLGNO14967 610 aa17.28■□□□□ 0.36
THSD4-202ENST00000355327 TCERG1O14776 1098 aaKnown RBP17.28■□□□□ 0.36
THSD4-202ENST00000355327 CCAR1Q8IX12 1150 aaKnown RBP17.26■□□□□ 0.35
THSD4-202ENST00000355327 IFT57Q9NWB7 429 aa17.26■□□□□ 0.35
THSD4-202ENST00000355327 EIF4G2P78344 907 aaKnown RBP eCLIP17.26■□□□□ 0.35
THSD4-202ENST00000355327 CHGAP10645 457 aaKnown RBP17.25■□□□□ 0.35
THSD4-202ENST00000355327 SENP3-EIF4A1A0A087X0R7 540 aa17.25■□□□□ 0.35
THSD4-202ENST00000355327 MYO6Q9UM54 1294 aa17.25■□□□□ 0.35
THSD4-202ENST00000355327 NPHP1O15259 732 aa17.24■□□□□ 0.35
THSD4-202ENST00000355327 AXDND1Q5T1B0 1012 aaPredicted RBP17.24■□□□□ 0.35
THSD4-202ENST00000355327 DDX49Q9Y6V7 483 aaKnown RBP17.23■□□□□ 0.35
THSD4-202ENST00000355327 ESF1Q9H501 851 aaKnown RBP17.23■□□□□ 0.35
THSD4-202ENST00000355327 MAPK8IP3Q9UPT6 1336 aa17.23■□□□□ 0.35
THSD4-202ENST00000355327 SKIDA1Q1XH10 827 aa17.22■□□□□ 0.35
THSD4-202ENST00000355327 IRX3P78415 501 aaPredicted RBP17.22■□□□□ 0.35
THSD4-202ENST00000355327 R3HCC1Q9Y3T6 440 aaKnown RBP17.22■□□□□ 0.35
THSD4-202ENST00000355327 HIRIP3Q9BW71 556 aaPredicted RBP17.22■□□□□ 0.35
THSD4-202ENST00000355327 TSHZ2Q9NRE2 1034 aa17.22■□□□□ 0.35
THSD4-202ENST00000355327 ST18O60284 1047 aa17.21■□□□□ 0.35
THSD4-202ENST00000355327 NF2P35240 595 aa17.21■□□□□ 0.35
THSD4-202ENST00000355327 ATP6V1DQ9Y5K8 247 aa17.21■□□□□ 0.35
THSD4-202ENST00000355327 TNNT1P13805 278 aa17.21■□□□□ 0.35
THSD4-202ENST00000355327 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.34
THSD4-202ENST00000355327 SSR1P43307 286 aaKnown RBP17.2■□□□□ 0.34
THSD4-202ENST00000355327 CENPHQ9H3R5 247 aa17.2■□□□□ 0.34
THSD4-202ENST00000355327 CT47B1P0C2W7 299 aaPredicted RBP17.2■□□□□ 0.34
THSD4-202ENST00000355327 GOLGA6L10A6NI86 522 aa17.19■□□□□ 0.34
THSD4-202ENST00000355327 KAT6BQ8WYB5 2073 aa17.19■□□□□ 0.34
THSD4-202ENST00000355327 SPATA24Q86W54 205 aa17.18■□□□□ 0.34
THSD4-202ENST00000355327 ANKRD20A12PQ8NF67 263 aa17.18■□□□□ 0.34
THSD4-202ENST00000355327 HMGN5P82970 282 aaKnown RBP17.18■□□□□ 0.34
THSD4-202ENST00000355327 U2SURPO15042 1029 aaKnown RBP17.18■□□□□ 0.34
THSD4-202ENST00000355327 MFAP1P55081 439 aaKnown RBP17.18■□□□□ 0.34
THSD4-202ENST00000355327 SF3A1Q15459 793 aaKnown RBP17.18■□□□□ 0.34
THSD4-202ENST00000355327 ZNF777Q9ULD5 760 aaPredicted RBP17.18■□□□□ 0.34
THSD4-202ENST00000355327 ERICH4A6NGS2 130 aa17.18■□□□□ 0.34
THSD4-202ENST00000355327 DDX11Q96FC9 970 aa17.17■□□□□ 0.34
THSD4-202ENST00000355327 IPO4Q8TEX9 1081 aaKnown RBP17.17■□□□□ 0.34
THSD4-202ENST00000355327 CCDC173Q0VFZ6 552 aa17.17■□□□□ 0.34
THSD4-202ENST00000355327 NEUROD2Q15784 382 aa17.17■□□□□ 0.34
THSD4-202ENST00000355327 DHX37Q8IY37 1157 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 240.2 ms