RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 PLCH2O75038 1416 aa22.13■■□□□ 1.13
NIPAL3-202ENST00000339255 CFDP1Q9UEE9 299 aaPredicted RBP22.13■■□□□ 1.13
NIPAL3-202ENST00000339255 ARHGAP5Q13017 1502 aa22.12■■□□□ 1.13
NIPAL3-202ENST00000339255 MAP3K4Q9Y6R4 1608 aa22.1■■□□□ 1.13
NIPAL3-202ENST00000339255 CAMSAP2Q08AD1 1489 aa22.09■■□□□ 1.13
NIPAL3-202ENST00000339255 CFAP74Q9C0B2 1584 aa22.08■■□□□ 1.13
NIPAL3-202ENST00000339255 FAM50AQ14320 339 aaKnown RBP22.07■■□□□ 1.12
NIPAL3-202ENST00000339255 PCGF6Q9BYE7 350 aa22.07■■□□□ 1.12
NIPAL3-202ENST00000339255 KIF13AQ9H1H9 1805 aa22.06■■□□□ 1.12
NIPAL3-202ENST00000339255 PLEKHH2Q8IVE3 1493 aa22.06■■□□□ 1.12
NIPAL3-202ENST00000339255 SAMD9LQ8IVG5 1584 aa22.05■■□□□ 1.12
NIPAL3-202ENST00000339255 CD109Q6YHK3 1445 aa22.05■■□□□ 1.12
NIPAL3-202ENST00000339255 DNMT1P26358 1616 aaKnown RBP22.03■■□□□ 1.12
NIPAL3-202ENST00000339255 FANCAO15360 1455 aa22.03■■□□□ 1.12
NIPAL3-202ENST00000339255 EFCAB2Q5VUJ9 269 aa22.03■■□□□ 1.12
NIPAL3-202ENST00000339255 ARHGEF5Q12774 1597 aa22■■□□□ 1.11
NIPAL3-202ENST00000339255 CROCC2H7BZ55 1655 aa22■■□□□ 1.11
NIPAL3-202ENST00000339255 KIAA1107Q9UPP5 1409 aa22■■□□□ 1.11
NIPAL3-202ENST00000339255 ABCC1P33527 1531 aa21.99■■□□□ 1.11
NIPAL3-202ENST00000339255 ZNF777Q9ULD5 760 aaPredicted RBP21.99■■□□□ 1.11
NIPAL3-202ENST00000339255 FAM69CQ0P6D2 419 aa21.98■■□□□ 1.11
NIPAL3-202ENST00000339255 ZNF644Q9H582 1327 aaPredicted RBP21.97■■□□□ 1.11
NIPAL3-202ENST00000339255 NEO1Q92859 1461 aa21.97■■□□□ 1.11
NIPAL3-202ENST00000339255 SYCP2Q9BX26 1530 aa21.97■■□□□ 1.11
NIPAL3-202ENST00000339255 DAPK1P53355 1430 aa21.96■■□□□ 1.11
NIPAL3-202ENST00000339255 TEX14Q8IWB6 1497 aa21.95■■□□□ 1.1
NIPAL3-202ENST00000339255 RSPH4AQ5TD94 716 aa21.94■■□□□ 1.1
NIPAL3-202ENST00000339255 MBD5Q9P267 1494 aa21.94■■□□□ 1.1
NIPAL3-202ENST00000339255 SHANK2Q9UPX8 1470 aa21.94■■□□□ 1.1
NIPAL3-202ENST00000339255 TSPOAP1O95153 1857 aa21.94■■□□□ 1.1
NIPAL3-202ENST00000339255 PPRC1Q5VV67 1664 aaKnown RBP21.93■■□□□ 1.1
NIPAL3-202ENST00000339255 CCDC141Q6ZP82 1450 aa21.93■■□□□ 1.1
NIPAL3-202ENST00000339255 ADGRL1O94910 1474 aa21.92■■□□□ 1.1
NIPAL3-202ENST00000339255 ADGBQ8N7X0 1667 aa21.92■■□□□ 1.1
NIPAL3-202ENST00000339255 ABCC5O15440 1437 aa21.92■■□□□ 1.1
NIPAL3-202ENST00000339255 AKNAQ7Z591 1439 aa21.91■■□□□ 1.1
NIPAL3-202ENST00000339255 ITGAEP38570 1179 aa21.91■■□□□ 1.1
NIPAL3-202ENST00000339255 MAST1Q9Y2H9 1570 aa21.88■■□□□ 1.09
NIPAL3-202ENST00000339255 ARHGEF12Q9NZN5 1544 aa21.87■■□□□ 1.09
NIPAL3-202ENST00000339255 PTPRKQ15262 1439 aa21.87■■□□□ 1.09
NIPAL3-202ENST00000339255 ROCK1Q13464 1354 aa21.87■■□□□ 1.09
NIPAL3-202ENST00000339255 HNRNPMP52272 730 aaKnown RBP eCLIP21.85■■□□□ 1.09
NIPAL3-202ENST00000339255 SCAPERQ9BY12 1400 aa21.85■■□□□ 1.09
NIPAL3-202ENST00000339255 ADGRL2O95490 1459 aa21.85■■□□□ 1.09
NIPAL3-202ENST00000339255 GCC2Q8IWJ2 1684 aa21.84■■□□□ 1.09
NIPAL3-202ENST00000339255 C9orf84Q5VXU9 1444 aa21.84■■□□□ 1.09
NIPAL3-202ENST00000339255 ZNF518AQ6AHZ1 1483 aa21.84■■□□□ 1.09
NIPAL3-202ENST00000339255 HFM1A2PYH4 1435 aa21.83■■□□□ 1.08
NIPAL3-202ENST00000339255 TSPY4P0CV99 314 aa21.82■■□□□ 1.08
NIPAL3-202ENST00000339255 TSPY10P0CW01 314 aa21.82■■□□□ 1.08
NIPAL3-202ENST00000339255 POGZQ7Z3K3 1410 aa21.81■■□□□ 1.08
NIPAL3-202ENST00000339255 TRAPPC8Q9Y2L5 1435 aa21.81■■□□□ 1.08
NIPAL3-202ENST00000339255 PLXNC1O60486 1568 aa21.81■■□□□ 1.08
NIPAL3-202ENST00000339255 KDM5CP41229 1560 aa21.8■■□□□ 1.08
NIPAL3-202ENST00000339255 ANKRD30AQ9BXX3 1397 aa21.8■■□□□ 1.08
NIPAL3-202ENST00000339255 RICTORQ6R327 1708 aa21.8■■□□□ 1.08
NIPAL3-202ENST00000339255 DENND4BO75064 1496 aaPredicted RBP21.79■■□□□ 1.08
NIPAL3-202ENST00000339255 INO80Q9ULG1 1556 aaPredicted RBP21.78■■□□□ 1.08
NIPAL3-202ENST00000339255 NCOA1Q15788 1441 aa21.78■■□□□ 1.08
NIPAL3-202ENST00000339255 RTEL1-TNFRSF6BF6WH68 1400 aa21.77■■□□□ 1.08
NIPAL3-202ENST00000339255 ZFYVE16Q7Z3T8 1539 aa21.77■■□□□ 1.07
NIPAL3-202ENST00000339255 NAIPQ13075 1403 aa21.76■■□□□ 1.07
NIPAL3-202ENST00000339255 SETD5Q9C0A6 1442 aa21.76■■□□□ 1.07
NIPAL3-202ENST00000339255 TRHP20396 242 aaPredicted RBP21.75■■□□□ 1.07
NIPAL3-202ENST00000339255 CHIC2Q9UKJ5 165 aa21.75■■□□□ 1.07
NIPAL3-202ENST00000339255 ATP7AQ04656 1500 aa21.75■■□□□ 1.07
NIPAL3-202ENST00000339255 HECW2Q9P2P5 1572 aa21.74■■□□□ 1.07
NIPAL3-202ENST00000339255 SPAG9O60271 1321 aaKnown RBP21.73■■□□□ 1.07
NIPAL3-202ENST00000339255 ZMYM4Q5VZL5 1548 aa21.72■■□□□ 1.07
NIPAL3-202ENST00000339255 FRMPD1Q5SYB0 1578 aa21.72■■□□□ 1.07
NIPAL3-202ENST00000339255 MLH3Q9UHC1 1453 aa21.71■■□□□ 1.07
NIPAL3-202ENST00000339255 AFAP1Q8N556 730 aa21.71■■□□□ 1.07
NIPAL3-202ENST00000339255 KIDINS220Q9ULH0 1771 aa21.71■■□□□ 1.07
NIPAL3-202ENST00000339255 KIF15Q9NS87 1388 aa21.7■■□□□ 1.06
NIPAL3-202ENST00000339255 HRCP23327 699 aa21.69■■□□□ 1.06
NIPAL3-202ENST00000339255 RAB3GAP2Q9H2M9 1393 aa21.69■■□□□ 1.06
NIPAL3-202ENST00000339255 ACIN1Q9UKV3 1341 aaKnown RBP21.69■■□□□ 1.06
NIPAL3-202ENST00000339255 RRP7BPQ9NSQ0 103 aa21.69■■□□□ 1.06
NIPAL3-202ENST00000339255 DUOX2Q9NRD8 1548 aa21.68■■□□□ 1.06
NIPAL3-202ENST00000339255 MAGI2Q86UL8 1455 aa21.66■■□□□ 1.06
NIPAL3-202ENST00000339255 ANKRD50Q9ULJ7 1429 aa21.64■■□□□ 1.06
NIPAL3-202ENST00000339255 RAPGEF3O95398 923 aa21.64■■□□□ 1.05
NIPAL3-202ENST00000339255 ERBINQ96RT1 1412 aa21.63■■□□□ 1.05
NIPAL3-202ENST00000339255 KDM6BO15054 1643 aa21.61■■□□□ 1.05
NIPAL3-202ENST00000339255 ABCA6Q8N139 1617 aa21.61■■□□□ 1.05
NIPAL3-202ENST00000339255 EIF2AK4Q9P2K8 1649 aaKnown RBP21.6■■□□□ 1.05
NIPAL3-202ENST00000339255 MYT1LQ9UL68 1186 aa21.6■■□□□ 1.05
NIPAL3-202ENST00000339255 COL17A1Q9UMD9 1497 aaPredicted RBP21.59■■□□□ 1.05
NIPAL3-202ENST00000339255 DIP2CQ9Y2E4 1556 aa21.59■■□□□ 1.05
NIPAL3-202ENST00000339255 ARHGEF40Q8TER5 1519 aa21.56■■□□□ 1.04
NIPAL3-202ENST00000339255 A2MP01023 1474 aa21.55■■□□□ 1.04
NIPAL3-202ENST00000339255 BCORL1Q5H9F3 1711 aa21.55■■□□□ 1.04
NIPAL3-202ENST00000339255 UNC13BO14795 1591 aa21.54■■□□□ 1.04
NIPAL3-202ENST00000339255 DHX29Q7Z478 1369 aaKnown RBP21.54■■□□□ 1.04
NIPAL3-202ENST00000339255 REREQ9P2R6 1566 aa21.54■■□□□ 1.04
NIPAL3-202ENST00000339255 DEPDC5O75140 1603 aa21.52■■□□□ 1.04
NIPAL3-202ENST00000339255 YEATS2Q9ULM3 1422 aa21.51■■□□□ 1.03
NIPAL3-202ENST00000339255 KDM5DQ9BY66 1539 aa21.5■■□□□ 1.03
NIPAL3-202ENST00000339255 ATP10AO60312 1499 aa21.49■■□□□ 1.03
NIPAL3-202ENST00000339255 RNF17Q9BXT8 1623 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms