RNA–Protein interactions for RNA: ENST00000328085.10

NPIPA1-201, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPA1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-201ENST00000328085 FHAD1B1AJZ9 1412 aa12.64□□□□□ -0.39
NPIPA1-201ENST00000328085 SOCS7O14512 581 aa12.64□□□□□ -0.39
NPIPA1-201ENST00000328085 ZNF326Q5BKZ1 582 aaKnown RBP12.64□□□□□ -0.39
NPIPA1-201ENST00000328085 PPM1GO15355 546 aaPredicted RBP12.63□□□□□ -0.39
NPIPA1-201ENST00000328085 BCANQ96GW7 911 aa12.63□□□□□ -0.39
NPIPA1-201ENST00000328085 EEA1Q15075 1411 aa12.62□□□□□ -0.39
NPIPA1-201ENST00000328085 COL17A1Q9UMD9 1497 aaPredicted RBP12.62□□□□□ -0.39
NPIPA1-201ENST00000328085 IPO9Q96P70 1041 aaKnown RBP12.62□□□□□ -0.39
NPIPA1-201ENST00000328085 ANP32AP39687 249 aaKnown RBP12.61□□□□□ -0.39
NPIPA1-201ENST00000328085 AAMPQ13685 434 aa12.61□□□□□ -0.39
NPIPA1-201ENST00000328085 VSIG10Q8N0Z9 540 aa12.61□□□□□ -0.39
NPIPA1-201ENST00000328085 PPP4R2Q9NY27 417 aa12.61□□□□□ -0.39
NPIPA1-201ENST00000328085 TAF7LQ5H9L4 462 aa12.6□□□□□ -0.39
NPIPA1-201ENST00000328085 ZBTB47Q9UFB7 747 aaPredicted RBP12.58□□□□□ -0.4
NPIPA1-201ENST00000328085 CENPJQ9HC77 1338 aaPredicted RBP12.58□□□□□ -0.4
NPIPA1-201ENST00000328085 PPRC1Q5VV67 1664 aaKnown RBP12.57□□□□□ -0.4
NPIPA1-201ENST00000328085 DISP3Q9P2K9 1392 aa12.56□□□□□ -0.4
NPIPA1-201ENST00000328085 NBR1Q14596 966 aa12.55□□□□□ -0.4
NPIPA1-201ENST00000328085 RBM10P98175 930 aaKnown RBP12.51□□□□□ -0.41
NPIPA1-201ENST00000328085 HSP90AA2PQ14568 343 aaPredicted RBP12.51□□□□□ -0.41
NPIPA1-201ENST00000328085 RTN4Q9NQC3 1192 aaKnown RBP12.51□□□□□ -0.41
NPIPA1-201ENST00000328085 ASXL2Q76L83 1435 aa12.51□□□□□ -0.41
NPIPA1-201ENST00000328085 RUSC2Q8N2Y8 1516 aa12.51□□□□□ -0.41
NPIPA1-201ENST00000328085 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
NPIPA1-201ENST00000328085 NCLP19338 710 aaKnown RBP12.5□□□□□ -0.41
NPIPA1-201ENST00000328085 GLI2P10070 1586 aa12.5□□□□□ -0.41
NPIPA1-201ENST00000328085 ERICH3Q5RHP9 1530 aa12.49□□□□□ -0.41
NPIPA1-201ENST00000328085 NEFMP07197 916 aa12.48□□□□□ -0.41
NPIPA1-201ENST00000328085 CALD1Q05682 793 aaKnown RBP12.48□□□□□ -0.41
NPIPA1-201ENST00000328085 GSE1Q14687 1217 aa12.48□□□□□ -0.41
NPIPA1-201ENST00000328085 RNF39Q9H2S5 420 aa12.48□□□□□ -0.41
NPIPA1-201ENST00000328085 PLB1Q6P1J6 1458 aa12.47□□□□□ -0.41
NPIPA1-201ENST00000328085 PTPRGP23470 1445 aa12.47□□□□□ -0.41
NPIPA1-201ENST00000328085 ITGAEP38570 1179 aa12.45□□□□□ -0.42
NPIPA1-201ENST00000328085 ABCC2Q92887 1545 aa12.44□□□□□ -0.42
NPIPA1-201ENST00000328085 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
NPIPA1-201ENST00000328085 HSP90AA1P07900 732 aaKnown RBP12.44□□□□□ -0.42
NPIPA1-201ENST00000328085 TEX14Q8IWB6 1497 aa12.42□□□□□ -0.42
NPIPA1-201ENST00000328085 CERKQ8TCT0 537 aa12.42□□□□□ -0.42
NPIPA1-201ENST00000328085 EPRSP07814 1512 aaKnown RBP12.42□□□□□ -0.42
NPIPA1-201ENST00000328085 MAP3K4Q9Y6R4 1608 aa12.4□□□□□ -0.42
NPIPA1-201ENST00000328085 CACNB1Q02641 598 aaPredicted RBP12.4□□□□□ -0.42
NPIPA1-201ENST00000328085 KIAA0586Q9BVV6 1533 aa12.4□□□□□ -0.42
NPIPA1-201ENST00000328085 TNIKQ9UKE5 1360 aa12.4□□□□□ -0.42
NPIPA1-201ENST00000328085 CUL7Q14999 1698 aa12.39□□□□□ -0.43
NPIPA1-201ENST00000328085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.39□□□□□ -0.43
NPIPA1-201ENST00000328085 PTPRMP28827 1452 aa12.38□□□□□ -0.43
NPIPA1-201ENST00000328085 KIF21BO75037 1637 aa12.37□□□□□ -0.43
NPIPA1-201ENST00000328085 RSPH4AQ5TD94 716 aa12.37□□□□□ -0.43
NPIPA1-201ENST00000328085 DDRGK1Q96HY6 314 aa12.36□□□□□ -0.43
NPIPA1-201ENST00000328085 PDCL3Q9H2J4 239 aa12.36□□□□□ -0.43
NPIPA1-201ENST00000328085 TIMELESSQ9UNS1 1208 aa12.36□□□□□ -0.43
NPIPA1-201ENST00000328085 HSPA2P54652 639 aa12.35□□□□□ -0.43
NPIPA1-201ENST00000328085 MAP7D2Q96T17 732 aa12.34□□□□□ -0.43
NPIPA1-201ENST00000328085 BRPF3Q9ULD4 1205 aa12.34□□□□□ -0.43
NPIPA1-201ENST00000328085 BIVM-ERCC5R4GMW8 1640 aa12.33□□□□□ -0.43
NPIPA1-201ENST00000328085 CEP162Q5TB80 1403 aa12.33□□□□□ -0.44
NPIPA1-201ENST00000328085 PCF11O94913 1555 aaKnown RBP12.33□□□□□ -0.44
NPIPA1-201ENST00000328085 UHRF1BP1LA0JNW5 1464 aa12.33□□□□□ -0.44
NPIPA1-201ENST00000328085 DHX57Q6P158 1386 aaKnown RBP12.32□□□□□ -0.44
NPIPA1-201ENST00000328085 UACAQ9BZF9 1416 aa12.32□□□□□ -0.44
NPIPA1-201ENST00000328085 CARMIL2Q6F5E8 1435 aa12.31□□□□□ -0.44
NPIPA1-201ENST00000328085 ANP32CO43423 234 aa12.31□□□□□ -0.44
NPIPA1-201ENST00000328085 TPM2P07951 284 aa12.31□□□□□ -0.44
NPIPA1-201ENST00000328085 L1TD1Q5T7N2 865 aaKnown RBP12.31□□□□□ -0.44
NPIPA1-201ENST00000328085 BCL11BQ9C0K0 894 aaPredicted RBP12.31□□□□□ -0.44
NPIPA1-201ENST00000328085 SPATA31D1Q6ZQQ2 1576 aa12.3□□□□□ -0.44
NPIPA1-201ENST00000328085 A0A0U1RQG5 324 aaPredicted RBP12.3□□□□□ -0.44
NPIPA1-201ENST00000328085 C1QBPQ07021 282 aaKnown RBP12.3□□□□□ -0.44
NPIPA1-201ENST00000328085 ADAMTSL3P82987 1691 aa12.29□□□□□ -0.44
NPIPA1-201ENST00000328085 CLCN1P35523 988 aa12.29□□□□□ -0.44
NPIPA1-201ENST00000328085 KDM5BQ9UGL1 1544 aa12.28□□□□□ -0.44
NPIPA1-201ENST00000328085 KCNH8Q96L42 1107 aa12.28□□□□□ -0.44
NPIPA1-201ENST00000328085 PRDM4Q9UKN5 801 aa12.28□□□□□ -0.44
NPIPA1-201ENST00000328085 CD109Q6YHK3 1445 aa12.28□□□□□ -0.44
NPIPA1-201ENST00000328085 IPO4Q8TEX9 1081 aaKnown RBP12.27□□□□□ -0.45
NPIPA1-201ENST00000328085 ZCCHC11Q5TAX3 1644 aaKnown RBP12.26□□□□□ -0.45
NPIPA1-201ENST00000328085 MS4A1P11836 297 aa12.26□□□□□ -0.45
NPIPA1-201ENST00000328085 PNNQ9H307 717 aaKnown RBP12.26□□□□□ -0.45
NPIPA1-201ENST00000328085 IGF1RP08069 1367 aa12.26□□□□□ -0.45
NPIPA1-201ENST00000328085 MAGI3Q5TCQ9 1506 aa12.26□□□□□ -0.45
NPIPA1-201ENST00000328085 VGFO15240 615 aaPredicted RBP12.25□□□□□ -0.45
NPIPA1-201ENST00000328085 PPP1R15AO75807 674 aaPredicted RBP12.25□□□□□ -0.45
NPIPA1-201ENST00000328085 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
NPIPA1-201ENST00000328085 TCERG1O14776 1098 aaKnown RBP12.24□□□□□ -0.45
NPIPA1-201ENST00000328085 ZBTB22O15209 634 aa12.24□□□□□ -0.45
NPIPA1-201ENST00000328085 BRD2P25440 801 aaKnown RBP12.24□□□□□ -0.45
NPIPA1-201ENST00000328085 ARID4BQ4LE39 1312 aaPredicted RBP12.24□□□□□ -0.45
NPIPA1-201ENST00000328085 MTERF4Q7Z6M4 381 aaKnown RBP12.24□□□□□ -0.45
NPIPA1-201ENST00000328085 WDR7Q9Y4E6 1490 aa12.23□□□□□ -0.45
NPIPA1-201ENST00000328085 TERF1P54274 439 aa12.23□□□□□ -0.45
NPIPA1-201ENST00000328085 KLHL34Q8N239 644 aa12.23□□□□□ -0.45
NPIPA1-201ENST00000328085 MADDQ8WXG6 1647 aa12.22□□□□□ -0.45
NPIPA1-201ENST00000328085 SMAP1Q8IYB5 467 aaPredicted RBP12.22□□□□□ -0.45
NPIPA1-201ENST00000328085 CNGB1Q14028 1251 aaPredicted RBP12.21□□□□□ -0.45
NPIPA1-201ENST00000328085 HOMEZQ8IX15 550 aa12.21□□□□□ -0.45
NPIPA1-201ENST00000328085 UTP14CQ5TAP6 766 aaKnown RBP12.2□□□□□ -0.46
NPIPA1-201ENST00000328085 RAPGEF3O95398 923 aa12.19□□□□□ -0.46
NPIPA1-201ENST00000328085 SLC4A2P04920 1241 aa12.19□□□□□ -0.46
NPIPA1-201ENST00000328085 CANXP27824 592 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms