RNA–Protein interactions for RNA: ENST00000326654.6

ERGIC1-201, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best) BASIC

Gene ERGIC1, Length 3,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-201ENST00000326654 ADRA2BP18089 450 aa11.67□□□□□ -0.54
ERGIC1-201ENST00000326654 FOXD1Q16676 465 aa11.67□□□□□ -0.54
ERGIC1-201ENST00000326654 SUPT6HQ7KZ85 1726 aaKnown RBP11.65□□□□□ -0.54
ERGIC1-201ENST00000326654 RSPH4AQ5TD94 716 aa11.65□□□□□ -0.54
ERGIC1-201ENST00000326654 ERICH6Q7L0X2 663 aa11.65□□□□□ -0.54
ERGIC1-201ENST00000326654 SUPT16HQ9Y5B9 1047 aaKnown RBP11.64□□□□□ -0.55
ERGIC1-201ENST00000326654 ATP10BO94823 1461 aa11.64□□□□□ -0.55
ERGIC1-201ENST00000326654 ANKRD30AQ9BXX3 1397 aa11.64□□□□□ -0.55
ERGIC1-201ENST00000326654 TONSLQ96HA7 1378 aa11.64□□□□□ -0.55
ERGIC1-201ENST00000326654 TSHZ2Q9NRE2 1034 aa11.63□□□□□ -0.55
ERGIC1-201ENST00000326654 MIA2Q96PC5 1412 aa11.63□□□□□ -0.55
ERGIC1-201ENST00000326654 ZNF326Q5BKZ1 582 aaKnown RBP11.62□□□□□ -0.55
ERGIC1-201ENST00000326654 TRHP20396 242 aaPredicted RBP11.62□□□□□ -0.55
ERGIC1-201ENST00000326654 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
ERGIC1-201ENST00000326654 RTN4Q9NQC3 1192 aaKnown RBP11.6□□□□□ -0.55
ERGIC1-201ENST00000326654 SPAG9O60271 1321 aaKnown RBP11.6□□□□□ -0.55
ERGIC1-201ENST00000326654 SIN3AQ96ST3 1273 aa11.6□□□□□ -0.55
ERGIC1-201ENST00000326654 PPP6R1Q9UPN7 881 aa11.6□□□□□ -0.55
ERGIC1-201ENST00000326654 ARHGEF11O15085 1522 aa11.59□□□□□ -0.55
ERGIC1-201ENST00000326654 FAM69CQ0P6D2 419 aa11.59□□□□□ -0.55
ERGIC1-201ENST00000326654 ARHGAP5Q13017 1502 aa11.59□□□□□ -0.55
ERGIC1-201ENST00000326654 CFAP43Q8NDM7 1665 aa11.58□□□□□ -0.56
ERGIC1-201ENST00000326654 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.58□□□□□ -0.56
ERGIC1-201ENST00000326654 ESF1Q9H501 851 aaKnown RBP11.57□□□□□ -0.56
ERGIC1-201ENST00000326654 KIF14Q15058 1648 aa11.56□□□□□ -0.56
ERGIC1-201ENST00000326654 MPHOSPH9Q99550 1183 aa11.55□□□□□ -0.56
ERGIC1-201ENST00000326654 DHX57Q6P158 1386 aaKnown RBP11.55□□□□□ -0.56
ERGIC1-201ENST00000326654 ABCC2Q92887 1545 aa11.55□□□□□ -0.56
ERGIC1-201ENST00000326654 NUP155O75694 1391 aa11.54□□□□□ -0.56
ERGIC1-201ENST00000326654 POLR3GLQ9BT43 218 aa11.54□□□□□ -0.56
ERGIC1-201ENST00000326654 PRKCSHP14314 528 aaPredicted RBP11.54□□□□□ -0.56
ERGIC1-201ENST00000326654 AFAP1Q8N556 730 aa11.54□□□□□ -0.56
ERGIC1-201ENST00000326654 ERCC6L2Q5T890 1561 aa11.53□□□□□ -0.56
ERGIC1-201ENST00000326654 PTPN23Q9H3S7 1636 aa11.53□□□□□ -0.56
ERGIC1-201ENST00000326654 CHGAP10645 457 aaKnown RBP11.53□□□□□ -0.56
ERGIC1-201ENST00000326654 GPATCH8Q9UKJ3 1502 aaKnown RBP11.53□□□□□ -0.56
ERGIC1-201ENST00000326654 PKD2Q13563 968 aa11.52□□□□□ -0.56
ERGIC1-201ENST00000326654 NEFLP07196 543 aa11.52□□□□□ -0.57
ERGIC1-201ENST00000326654 DAPK1P53355 1430 aa11.52□□□□□ -0.57
ERGIC1-201ENST00000326654 ABCA8O94911 1581 aa11.52□□□□□ -0.57
ERGIC1-201ENST00000326654 KIF3BO15066 747 aa11.51□□□□□ -0.57
ERGIC1-201ENST00000326654 GGT6Q6P531 493 aa11.51□□□□□ -0.57
ERGIC1-201ENST00000326654 KIF15Q9NS87 1388 aa11.51□□□□□ -0.57
ERGIC1-201ENST00000326654 FKBP8Q14318 412 aa11.51□□□□□ -0.57
ERGIC1-201ENST00000326654 MAGI3Q5TCQ9 1506 aa11.51□□□□□ -0.57
ERGIC1-201ENST00000326654 CAMSAP2Q08AD1 1489 aa11.51□□□□□ -0.57
ERGIC1-201ENST00000326654 ASXL2Q76L83 1435 aa11.51□□□□□ -0.57
ERGIC1-201ENST00000326654 KDM2AQ9Y2K7 1162 aa11.5□□□□□ -0.57
ERGIC1-201ENST00000326654 ARID4BQ4LE39 1312 aaPredicted RBP11.49□□□□□ -0.57
ERGIC1-201ENST00000326654 PLEKHH2Q8IVE3 1493 aa11.49□□□□□ -0.57
ERGIC1-201ENST00000326654 HFM1A2PYH4 1435 aa11.49□□□□□ -0.57
ERGIC1-201ENST00000326654 CLASP1Q7Z460 1538 aa11.49□□□□□ -0.57
ERGIC1-201ENST00000326654 C9orf84Q5VXU9 1444 aa11.49□□□□□ -0.57
ERGIC1-201ENST00000326654 KANK1Q14678 1352 aa11.49□□□□□ -0.57
ERGIC1-201ENST00000326654 RGL3Q3MIN7 710 aa11.49□□□□□ -0.57
ERGIC1-201ENST00000326654 ANKRD50Q9ULJ7 1429 aa11.48□□□□□ -0.57
ERGIC1-201ENST00000326654 ABCC5O15440 1437 aa11.48□□□□□ -0.57
ERGIC1-201ENST00000326654 CD109Q6YHK3 1445 aa11.48□□□□□ -0.57
ERGIC1-201ENST00000326654 WDR7Q9Y4E6 1490 aa11.48□□□□□ -0.57
ERGIC1-201ENST00000326654 NAIPQ13075 1403 aa11.47□□□□□ -0.57
ERGIC1-201ENST00000326654 SCAPERQ9BY12 1400 aa11.46□□□□□ -0.57
ERGIC1-201ENST00000326654 STAG3Q9UJ98 1225 aa11.46□□□□□ -0.57
ERGIC1-201ENST00000326654 MLECQ14165 292 aa11.46□□□□□ -0.58
ERGIC1-201ENST00000326654 TIMELESSQ9UNS1 1208 aa11.45□□□□□ -0.58
ERGIC1-201ENST00000326654 UHRF1BP1LA0JNW5 1464 aa11.45□□□□□ -0.58
ERGIC1-201ENST00000326654 CCDC141Q6ZP82 1450 aa11.45□□□□□ -0.58
ERGIC1-201ENST00000326654 PLCH2O75038 1416 aa11.45□□□□□ -0.58
ERGIC1-201ENST00000326654 PTPRKQ15262 1439 aa11.45□□□□□ -0.58
ERGIC1-201ENST00000326654 ROCK1Q13464 1354 aa11.44□□□□□ -0.58
ERGIC1-201ENST00000326654 RAPGEF3O95398 923 aa11.43□□□□□ -0.58
ERGIC1-201ENST00000326654 KDM5BQ9UGL1 1544 aa11.43□□□□□ -0.58
ERGIC1-201ENST00000326654 ITSN2Q9NZM3 1697 aa11.43□□□□□ -0.58
ERGIC1-201ENST00000326654 FANCAO15360 1455 aa11.43□□□□□ -0.58
ERGIC1-201ENST00000326654 TCOF1Q13428 1488 aaKnown RBP11.42□□□□□ -0.58
ERGIC1-201ENST00000326654 AKNAQ7Z591 1439 aa11.42□□□□□ -0.58
ERGIC1-201ENST00000326654 HIRIP3Q9BW71 556 aaPredicted RBP11.42□□□□□ -0.58
ERGIC1-201ENST00000326654 SHROOM2Q13796 1616 aa11.41□□□□□ -0.58
ERGIC1-201ENST00000326654 ADGRL1O94910 1474 aa11.41□□□□□ -0.58
ERGIC1-201ENST00000326654 NCOA1Q15788 1441 aa11.41□□□□□ -0.58
ERGIC1-201ENST00000326654 RBM19Q9Y4C8 960 aaKnown RBP11.41□□□□□ -0.58
ERGIC1-201ENST00000326654 CNGB1Q14028 1251 aaPredicted RBP11.41□□□□□ -0.58
ERGIC1-201ENST00000326654 WASHC2CQ9Y4E1 1318 aa11.4□□□□□ -0.58
ERGIC1-201ENST00000326654 DCAF11Q8TEB1 546 aa11.39□□□□□ -0.59
ERGIC1-201ENST00000326654 ABCC10Q5T3U5 1492 aa11.38□□□□□ -0.59
ERGIC1-201ENST00000326654 PPP1R15AO75807 674 aaPredicted RBP11.37□□□□□ -0.59
ERGIC1-201ENST00000326654 EIF4G2P78344 907 aaKnown RBP eCLIP11.37□□□□□ -0.59
ERGIC1-201ENST00000326654 L3MBTL2Q969R5 705 aa11.37□□□□□ -0.59
ERGIC1-201ENST00000326654 SYCP2Q9BX26 1530 aa11.37□□□□□ -0.59
ERGIC1-201ENST00000326654 ZCCHC11Q5TAX3 1644 aaKnown RBP11.37□□□□□ -0.59
ERGIC1-201ENST00000326654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.36□□□□□ -0.59
ERGIC1-201ENST00000326654 KIAA1107Q9UPP5 1409 aa11.36□□□□□ -0.59
ERGIC1-201ENST00000326654 LRRIQ1Q96JM4 1722 aa11.35□□□□□ -0.59
ERGIC1-201ENST00000326654 TRAPPC8Q9Y2L5 1435 aa11.34□□□□□ -0.59
ERGIC1-201ENST00000326654 DDX10Q13206 875 aaKnown RBP11.34□□□□□ -0.59
ERGIC1-201ENST00000326654 CCDC144AA2RUR9 1427 aa11.33□□□□□ -0.6
ERGIC1-201ENST00000326654 CARD11Q9BXL7 1154 aa11.33□□□□□ -0.6
ERGIC1-201ENST00000326654 DENND4BO75064 1496 aaPredicted RBP11.32□□□□□ -0.6
ERGIC1-201ENST00000326654 DAXXQ9UER7 740 aaPredicted RBP11.32□□□□□ -0.6
ERGIC1-201ENST00000326654 DNMT1P26358 1616 aaKnown RBP11.32□□□□□ -0.6
ERGIC1-201ENST00000326654 ADCY10Q96PN6 1610 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms