RNA–Protein interactions for RNA: ENST00000323833.12

TSFM-201, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSFM, Length 1,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-201ENST00000323833 RICTORQ6R327 1708 aa24.46■■□□□ 1.51
TSFM-201ENST00000323833 FRMPD1Q5SYB0 1578 aa24.45■■□□□ 1.5
TSFM-201ENST00000323833 RAPGEF3O95398 923 aa24.44■■□□□ 1.5
TSFM-201ENST00000323833 EFCAB2Q5VUJ9 269 aa24.43■■□□□ 1.5
TSFM-201ENST00000323833 SUPT6HQ7KZ85 1726 aaKnown RBP24.43■■□□□ 1.5
TSFM-201ENST00000323833 ADGRL1O94910 1474 aa24.41■■□□□ 1.5
TSFM-201ENST00000323833 MAP3K1Q13233 1512 aa24.4■■□□□ 1.5
TSFM-201ENST00000323833 DENND4BO75064 1496 aaPredicted RBP24.4■■□□□ 1.5
TSFM-201ENST00000323833 GPATCH8Q9UKJ3 1502 aaKnown RBP24.39■■□□□ 1.49
TSFM-201ENST00000323833 LRRC9Q6ZRR7 1453 aa24.38■■□□□ 1.49
TSFM-201ENST00000323833 SCAPERQ9BY12 1400 aa24.38■■□□□ 1.49
TSFM-201ENST00000323833 CCNB3Q8WWL7 1395 aa24.37■■□□□ 1.49
TSFM-201ENST00000323833 ITSN2Q9NZM3 1697 aa24.37■■□□□ 1.49
TSFM-201ENST00000323833 KANK4Q5T7N3 995 aaPredicted RBP24.36■■□□□ 1.49
TSFM-201ENST00000323833 NCOA2Q15596 1464 aa24.34■■□□□ 1.49
TSFM-201ENST00000323833 SAMD9LQ8IVG5 1584 aa24.33■■□□□ 1.49
TSFM-201ENST00000323833 ABCC1P33527 1531 aa24.32■■□□□ 1.48
TSFM-201ENST00000323833 APLP2Q06481 763 aa24.32■■□□□ 1.48
TSFM-201ENST00000323833 POGZQ7Z3K3 1410 aa24.31■■□□□ 1.48
TSFM-201ENST00000323833 ZNF777Q9ULD5 760 aaPredicted RBP24.31■■□□□ 1.48
TSFM-201ENST00000323833 ZMYM4Q5VZL5 1548 aa24.3■■□□□ 1.48
TSFM-201ENST00000323833 CFDP1Q9UEE9 299 aaPredicted RBP24.29■■□□□ 1.48
TSFM-201ENST00000323833 ARHGEF12Q9NZN5 1544 aa24.29■■□□□ 1.48
TSFM-201ENST00000323833 ZNF518AQ6AHZ1 1483 aa24.25■■□□□ 1.47
TSFM-201ENST00000323833 ARHGEF40Q8TER5 1519 aa24.25■■□□□ 1.47
TSFM-201ENST00000323833 SYCP2Q9BX26 1530 aa24.25■■□□□ 1.47
TSFM-201ENST00000323833 AFAP1Q8N556 730 aa24.24■■□□□ 1.47
TSFM-201ENST00000323833 KDM5CP41229 1560 aa24.24■■□□□ 1.47
TSFM-201ENST00000323833 TRAPPC8Q9Y2L5 1435 aa24.23■■□□□ 1.47
TSFM-201ENST00000323833 ZFYVE16Q7Z3T8 1539 aa24.23■■□□□ 1.47
TSFM-201ENST00000323833 YEATS2Q9ULM3 1422 aa24.21■■□□□ 1.47
TSFM-201ENST00000323833 ZNF644Q9H582 1327 aaPredicted RBP24.2■■□□□ 1.46
TSFM-201ENST00000323833 HNRNPMP52272 730 aaKnown RBP eCLIP24.2■■□□□ 1.46
TSFM-201ENST00000323833 HECW2Q9P2P5 1572 aa24.2■■□□□ 1.46
TSFM-201ENST00000323833 MAGI2Q86UL8 1455 aa24.19■■□□□ 1.46
TSFM-201ENST00000323833 PLEKHH2Q8IVE3 1493 aa24.19■■□□□ 1.46
TSFM-201ENST00000323833 SIGLEC1Q9BZZ2 1709 aa24.18■■□□□ 1.46
TSFM-201ENST00000323833 KIAA1107Q9UPP5 1409 aa24.17■■□□□ 1.46
TSFM-201ENST00000323833 KDM4FA0A1W2PPD8 638 aa24.16■■□□□ 1.46
TSFM-201ENST00000323833 KIDINS220Q9ULH0 1771 aa24.16■■□□□ 1.46
TSFM-201ENST00000323833 CAMSAP2Q08AD1 1489 aa24.15■■□□□ 1.46
TSFM-201ENST00000323833 MYT1LQ9UL68 1186 aa24.14■■□□□ 1.45
TSFM-201ENST00000323833 MYOM3Q5VTT5 1437 aa24.13■■□□□ 1.45
TSFM-201ENST00000323833 ABCA6Q8N139 1617 aa24.13■■□□□ 1.45
TSFM-201ENST00000323833 MLH3Q9UHC1 1453 aa24.13■■□□□ 1.45
TSFM-201ENST00000323833 DIP2CQ9Y2E4 1556 aa24.12■■□□□ 1.45
TSFM-201ENST00000323833 MBD5Q9P267 1494 aa24.1■■□□□ 1.45
TSFM-201ENST00000323833 ATP10AO60312 1499 aa24.09■■□□□ 1.45
TSFM-201ENST00000323833 BCORL1Q5H9F3 1711 aa24.09■■□□□ 1.45
TSFM-201ENST00000323833 ARID4BQ4LE39 1312 aaPredicted RBP24.08■■□□□ 1.44
TSFM-201ENST00000323833 INO80Q9ULG1 1556 aaPredicted RBP24.08■■□□□ 1.44
TSFM-201ENST00000323833 MIA2Q96PC5 1412 aa24.07■■□□□ 1.44
TSFM-201ENST00000323833 C9orf84Q5VXU9 1444 aa24.06■■□□□ 1.44
TSFM-201ENST00000323833 SPAG9O60271 1321 aaKnown RBP24.06■■□□□ 1.44
TSFM-201ENST00000323833 ATP7AQ04656 1500 aa24.05■■□□□ 1.44
TSFM-201ENST00000323833 PTPN23Q9H3S7 1636 aa24.05■■□□□ 1.44
TSFM-201ENST00000323833 ADAMTSL3P82987 1691 aa24.05■■□□□ 1.44
TSFM-201ENST00000323833 ARHGEF5Q12774 1597 aa24.03■■□□□ 1.44
TSFM-201ENST00000323833 CCDC141Q6ZP82 1450 aa24.03■■□□□ 1.44
TSFM-201ENST00000323833 PPARGC1BQ86YN6 1023 aaKnown RBP24.03■■□□□ 1.44
TSFM-201ENST00000323833 FGD6Q6ZV73 1430 aa24.01■■□□□ 1.43
TSFM-201ENST00000323833 REREQ9P2R6 1566 aa24■■□□□ 1.43
TSFM-201ENST00000323833 MADDQ8WXG6 1647 aa23.99■■□□□ 1.43
TSFM-201ENST00000323833 ADGBQ8N7X0 1667 aa23.99■■□□□ 1.43
TSFM-201ENST00000323833 RSPH4AQ5TD94 716 aa23.97■■□□□ 1.43
TSFM-201ENST00000323833 SENP3Q9H4L4 574 aaPredicted RBP23.97■■□□□ 1.43
TSFM-201ENST00000323833 MLECQ14165 292 aa23.96■■□□□ 1.43
TSFM-201ENST00000323833 FER1L4A9Z1Z3 1794 aa23.96■■□□□ 1.43
TSFM-201ENST00000323833 RIMS1Q86UR5 1692 aaKnown RBP23.95■■□□□ 1.43
TSFM-201ENST00000323833 CROCC2H7BZ55 1655 aa23.95■■□□□ 1.42
TSFM-201ENST00000323833 TCOF1Q13428 1488 aaKnown RBP23.94■■□□□ 1.42
TSFM-201ENST00000323833 RTEL1-TNFRSF6BF6WH68 1400 aa23.94■■□□□ 1.42
TSFM-201ENST00000323833 MAST1Q9Y2H9 1570 aa23.92■■□□□ 1.42
TSFM-201ENST00000323833 AGLP35573 1532 aa23.92■■□□□ 1.42
TSFM-201ENST00000323833 TSPY4P0CV99 314 aa23.91■■□□□ 1.42
TSFM-201ENST00000323833 TSPY10P0CW01 314 aa23.91■■□□□ 1.42
TSFM-201ENST00000323833 DNMT1P26358 1616 aaKnown RBP23.91■■□□□ 1.42
TSFM-201ENST00000323833 PLXNC1O60486 1568 aa23.91■■□□□ 1.42
TSFM-201ENST00000323833 A2MP01023 1474 aa23.9■■□□□ 1.42
TSFM-201ENST00000323833 ABCC5O15440 1437 aa23.86■■□□□ 1.41
TSFM-201ENST00000323833 PTPRMP28827 1452 aa23.86■■□□□ 1.41
TSFM-201ENST00000323833 DAPK1P53355 1430 aa23.85■■□□□ 1.41
TSFM-201ENST00000323833 FAM50AQ14320 339 aaKnown RBP23.85■■□□□ 1.41
TSFM-201ENST00000323833 SHANK2Q9UPX8 1470 aa23.81■■□□□ 1.4
TSFM-201ENST00000323833 DHX29Q7Z478 1369 aaKnown RBP23.81■■□□□ 1.4
TSFM-201ENST00000323833 PLPPR3Q6T4P5 718 aa23.77■■□□□ 1.4
TSFM-201ENST00000323833 CHIC2Q9UKJ5 165 aa23.76■■□□□ 1.39
TSFM-201ENST00000323833 CLTCQ00610 1675 aaKnown RBP23.75■■□□□ 1.39
TSFM-201ENST00000323833 C3P01024 1663 aa23.74■■□□□ 1.39
TSFM-201ENST00000323833 GGT6Q6P531 493 aa23.74■■□□□ 1.39
TSFM-201ENST00000323833 DUOX2Q9NRD8 1548 aa23.73■■□□□ 1.39
TSFM-201ENST00000323833 KIF3BO15066 747 aa23.72■■□□□ 1.39
TSFM-201ENST00000323833 RRP7BPQ9NSQ0 103 aa23.72■■□□□ 1.39
TSFM-201ENST00000323833 EIF2AK4Q9P2K8 1649 aaKnown RBP23.72■■□□□ 1.39
TSFM-201ENST00000323833 KIF15Q9NS87 1388 aa23.71■■□□□ 1.39
TSFM-201ENST00000323833 ESF1Q9H501 851 aaKnown RBP23.71■■□□□ 1.39
TSFM-201ENST00000323833 MROH2AA6NES4 1674 aa23.7■■□□□ 1.39
TSFM-201ENST00000323833 PTPRKQ15262 1439 aa23.69■■□□□ 1.38
TSFM-201ENST00000323833 CEBPAP49715 358 aaPredicted RBP23.69■■□□□ 1.38
TSFM-201ENST00000323833 ANKRD30AQ9BXX3 1397 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms