RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 C11orf95C9JLR9 678 aaPredicted RBP9.85□□□□□ -0.83
RSF1-201ENST00000308488 PDE4AP27815 886 aa9.85□□□□□ -0.83
RSF1-201ENST00000308488 KIAA1211Q6ZU35 1233 aa9.84□□□□□ -0.83
RSF1-201ENST00000308488 CLGNO14967 610 aa9.84□□□□□ -0.83
RSF1-201ENST00000308488 SLC4A1APQ9BWU0 796 aaKnown RBP9.84□□□□□ -0.83
RSF1-201ENST00000308488 R3HCC1Q9Y3T6 440 aaKnown RBP9.84□□□□□ -0.83
RSF1-201ENST00000308488 PLCB2Q00722 1185 aa9.84□□□□□ -0.83
RSF1-201ENST00000308488 CCDC39Q9UFE4 941 aa9.84□□□□□ -0.83
RSF1-201ENST00000308488 KIF3AQ9Y496 699 aa9.84□□□□□ -0.83
RSF1-201ENST00000308488 CALCOCO1Q9P1Z2 691 aa9.83□□□□□ -0.84
RSF1-201ENST00000308488 EIF4G2P78344 907 aaKnown RBP eCLIP9.83□□□□□ -0.84
RSF1-201ENST00000308488 MSH5O43196 834 aa9.82□□□□□ -0.84
RSF1-201ENST00000308488 DNAJC2Q99543 621 aaKnown RBP9.82□□□□□ -0.84
RSF1-201ENST00000308488 ESPNB1AK53 854 aa9.82□□□□□ -0.84
RSF1-201ENST00000308488 DIAPH3Q9NSV4 1193 aa9.82□□□□□ -0.84
RSF1-201ENST00000308488 CFAP44Q96MT7 982 aa9.82□□□□□ -0.84
RSF1-201ENST00000308488 TULP1O00294 542 aaPredicted RBP9.82□□□□□ -0.84
RSF1-201ENST00000308488 ZHX1Q9UKY1 873 aaPredicted RBP9.82□□□□□ -0.84
RSF1-201ENST00000308488 CCDC9Q9Y3X0 531 aaKnown RBP9.81□□□□□ -0.84
RSF1-201ENST00000308488 CCDC173Q0VFZ6 552 aa9.81□□□□□ -0.84
RSF1-201ENST00000308488 NASPP49321 788 aaPredicted RBP9.8□□□□□ -0.84
RSF1-201ENST00000308488 UQCRHLA0A096LP55 91 aa9.8□□□□□ -0.84
RSF1-201ENST00000308488 UQCRHP07919 91 aa9.8□□□□□ -0.84
RSF1-201ENST00000308488 USP8P40818 1118 aa9.8□□□□□ -0.84
RSF1-201ENST00000308488 GTPBP4Q9BZE4 634 aaKnown RBP9.8□□□□□ -0.84
RSF1-201ENST00000308488 IPO4Q8TEX9 1081 aaKnown RBP9.8□□□□□ -0.84
RSF1-201ENST00000308488 AEBP1Q8IUX7 1158 aa9.8□□□□□ -0.84
RSF1-201ENST00000308488 NUDCQ9Y266 331 aa9.79□□□□□ -0.84
RSF1-201ENST00000308488 GOLGA6L4A6NEF3 574 aa9.79□□□□□ -0.84
RSF1-201ENST00000308488 WWC1Q8IX03 1113 aa9.79□□□□□ -0.84
RSF1-201ENST00000308488 RDXP35241 583 aaKnown RBP9.79□□□□□ -0.84
RSF1-201ENST00000308488 PAK3O75914 559 aaPredicted RBP9.79□□□□□ -0.84
RSF1-201ENST00000308488 ARGLU1Q9NWB6 273 aaPredicted RBP9.79□□□□□ -0.84
RSF1-201ENST00000308488 LETM1O95202 739 aaPredicted RBP9.78□□□□□ -0.84
RSF1-201ENST00000308488 SMAP1Q8IYB5 467 aaPredicted RBP9.78□□□□□ -0.84
RSF1-201ENST00000308488 SPRYD3Q8NCJ5 442 aa9.78□□□□□ -0.84
RSF1-201ENST00000308488 KIF16BQ96L93 1317 aa9.78□□□□□ -0.84
RSF1-201ENST00000308488 FTSJ3Q8IY81 847 aaKnown RBP9.78□□□□□ -0.84
RSF1-201ENST00000308488 SSR1P43307 286 aaKnown RBP9.78□□□□□ -0.84
RSF1-201ENST00000308488 FAM161AQ3B820 660 aa9.77□□□□□ -0.84
RSF1-201ENST00000308488 STK11IPQ8N1F8 1099 aa9.77□□□□□ -0.84
RSF1-201ENST00000308488 PDCL2Q8N4E4 241 aa9.77□□□□□ -0.84
RSF1-201ENST00000308488 CHMP4BQ9H444 224 aaKnown RBP9.77□□□□□ -0.85
RSF1-201ENST00000308488 CTR9Q6PD62 1173 aa9.77□□□□□ -0.85
RSF1-201ENST00000308488 CGNQ9P2M7 1197 aaKnown RBP9.77□□□□□ -0.85
RSF1-201ENST00000308488 AAMPQ13685 434 aa9.77□□□□□ -0.85
RSF1-201ENST00000308488 NEFHP12036 1026 aa9.76□□□□□ -0.85
RSF1-201ENST00000308488 RCAN3Q9UKA8 241 aa9.76□□□□□ -0.85
RSF1-201ENST00000308488 TIGD1Q96MW7 591 aa9.76□□□□□ -0.85
RSF1-201ENST00000308488 TPM3P06753 285 aa9.76□□□□□ -0.85
RSF1-201ENST00000308488 AK7Q96M32 723 aa9.76□□□□□ -0.85
RSF1-201ENST00000308488 ZBED9Q6R2W3 1325 aa9.76□□□□□ -0.85
RSF1-201ENST00000308488 ZBTB7CA1YPR0 619 aa9.75□□□□□ -0.85
RSF1-201ENST00000308488 MAPK8IP2Q13387 824 aaPredicted RBP9.75□□□□□ -0.85
RSF1-201ENST00000308488 CEP162Q5TB80 1403 aa9.75□□□□□ -0.85
RSF1-201ENST00000308488 DYNC1I1O14576 645 aa9.74□□□□□ -0.85
RSF1-201ENST00000308488 MAPK8IP3Q9UPT6 1336 aa9.74□□□□□ -0.85
RSF1-201ENST00000308488 PRDM10Q9NQV6 1147 aa9.73□□□□□ -0.85
RSF1-201ENST00000308488 KIF20AO95235 890 aa9.73□□□□□ -0.85
RSF1-201ENST00000308488 PLCD4Q9BRC7 762 aa9.73□□□□□ -0.85
RSF1-201ENST00000308488 CHMP5Q9NZZ3 219 aa9.73□□□□□ -0.85
RSF1-201ENST00000308488 KCNJ4P48050 445 aa9.73□□□□□ -0.85
RSF1-201ENST00000308488 RBM28Q9NW13 759 aaKnown RBP9.73□□□□□ -0.85
RSF1-201ENST00000308488 BCCIPQ9P287 314 aaKnown RBP eCLIP9.73□□□□□ -0.85
RSF1-201ENST00000308488 ACBD3Q9H3P7 528 aa9.72□□□□□ -0.85
RSF1-201ENST00000308488 GTF2A1P52655 376 aaPredicted RBP9.71□□□□□ -0.85
RSF1-201ENST00000308488 SASS6Q6UVJ0 657 aa9.71□□□□□ -0.85
RSF1-201ENST00000308488 CLCN1P35523 988 aa9.71□□□□□ -0.85
RSF1-201ENST00000308488 FRAT2O75474 233 aaPredicted RBP9.71□□□□□ -0.86
RSF1-201ENST00000308488 CENPQQ7L2Z9 268 aaPredicted RBP9.71□□□□□ -0.86
RSF1-201ENST00000308488 ZSCAN30Q86W11 494 aa9.71□□□□□ -0.86
RSF1-201ENST00000308488 E9PSI1 815 aa9.71□□□□□ -0.86
RSF1-201ENST00000308488 CHMP4AQ9BY43 222 aa9.71□□□□□ -0.86
RSF1-201ENST00000308488 CLIP1P30622 1438 aa9.7□□□□□ -0.86
RSF1-201ENST00000308488 PDE3BQ13370 1112 aa9.7□□□□□ -0.86
RSF1-201ENST00000308488 LEKR1Q6ZMV7 388 aa9.7□□□□□ -0.86
RSF1-201ENST00000308488 NOC3LQ8WTT2 800 aaKnown RBP9.7□□□□□ -0.86
RSF1-201ENST00000308488 NBPF1Q3BBV0 1214 aa9.7□□□□□ -0.86
RSF1-201ENST00000308488 ZNF526Q8TF50 670 aaPredicted RBP9.7□□□□□ -0.86
RSF1-201ENST00000308488 HIRIP3Q9BW71 556 aaPredicted RBP9.69□□□□□ -0.86
RSF1-201ENST00000308488 KTN1Q86UP2 1357 aaKnown RBP9.69□□□□□ -0.86
RSF1-201ENST00000308488 MNS1Q8NEH6 495 aa9.69□□□□□ -0.86
RSF1-201ENST00000308488 PLCD3Q8N3E9 789 aa9.69□□□□□ -0.86
RSF1-201ENST00000308488 GIMAP7Q8NHV1 300 aa9.69□□□□□ -0.86
RSF1-201ENST00000308488 MCCP23508 829 aa9.69□□□□□ -0.86
RSF1-201ENST00000308488 GRPEL1Q9HAV7 217 aa9.69□□□□□ -0.86
RSF1-201ENST00000308488 DDX49Q9Y6V7 483 aaKnown RBP9.69□□□□□ -0.86
RSF1-201ENST00000308488 KLHL34Q8N239 644 aa9.69□□□□□ -0.86
RSF1-201ENST00000308488 TPM4P67936 248 aa9.68□□□□□ -0.86
RSF1-201ENST00000308488 SLC4A3P48751 1232 aa9.68□□□□□ -0.86
RSF1-201ENST00000308488 CCDC94Q9BW85 323 aaPredicted RBP9.68□□□□□ -0.86
RSF1-201ENST00000308488 FAM193AP78312 1265 aa9.67□□□□□ -0.86
RSF1-201ENST00000308488 CCDC191Q8NCU4 936 aa9.67□□□□□ -0.86
RSF1-201ENST00000308488 CAVIN1Q6NZI2 390 aaKnown RBP9.66□□□□□ -0.86
RSF1-201ENST00000308488 RNF20Q5VTR2 975 aa9.66□□□□□ -0.86
RSF1-201ENST00000308488 PES1O00541 588 aaKnown RBP9.66□□□□□ -0.86
RSF1-201ENST00000308488 MCM5P33992 734 aa9.66□□□□□ -0.86
RSF1-201ENST00000308488 PPP4R3BQ5MIZ7 849 aa9.66□□□□□ -0.86
RSF1-201ENST00000308488 RWDD1Q9H446 243 aaPredicted RBP9.66□□□□□ -0.86
RSF1-201ENST00000308488 FAM107BQ9H098 131 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms