RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 AKNAQ7Z591 1439 aa27.32■■□□□ 1.96
ATG3-201ENST00000283290 MAP3K1Q13233 1512 aa27.32■■□□□ 1.96
ATG3-201ENST00000283290 SUPT6HQ7KZ85 1726 aaKnown RBP27.31■■□□□ 1.96
ATG3-201ENST00000283290 ARHGAP5Q13017 1502 aa27.3■■□□□ 1.96
ATG3-201ENST00000283290 FRMPD1Q5SYB0 1578 aa27.27■■□□□ 1.96
ATG3-201ENST00000283290 NCOA2Q15596 1464 aa27.26■■□□□ 1.95
ATG3-201ENST00000283290 RICTORQ6R327 1708 aa27.25■■□□□ 1.95
ATG3-201ENST00000283290 ADGRL1O94910 1474 aa27.24■■□□□ 1.95
ATG3-201ENST00000283290 RAPGEF3O95398 923 aa27.24■■□□□ 1.95
ATG3-201ENST00000283290 EFCAB2Q5VUJ9 269 aa27.24■■□□□ 1.95
ATG3-201ENST00000283290 GPATCH8Q9UKJ3 1502 aaKnown RBP27.22■■□□□ 1.95
ATG3-201ENST00000283290 DENND4BO75064 1496 aaPredicted RBP27.21■■□□□ 1.95
ATG3-201ENST00000283290 CCNB3Q8WWL7 1395 aa27.21■■□□□ 1.95
ATG3-201ENST00000283290 ZNF777Q9ULD5 760 aaPredicted RBP27.18■■□□□ 1.94
ATG3-201ENST00000283290 SCAPERQ9BY12 1400 aa27.18■■□□□ 1.94
ATG3-201ENST00000283290 ITSN2Q9NZM3 1697 aa27.17■■□□□ 1.94
ATG3-201ENST00000283290 SAMD9LQ8IVG5 1584 aa27.14■■□□□ 1.94
ATG3-201ENST00000283290 ABCC1P33527 1531 aa27.14■■□□□ 1.94
ATG3-201ENST00000283290 POGZQ7Z3K3 1410 aa27.13■■□□□ 1.93
ATG3-201ENST00000283290 CFDP1Q9UEE9 299 aaPredicted RBP27.12■■□□□ 1.93
ATG3-201ENST00000283290 ZNF644Q9H582 1327 aaPredicted RBP27.11■■□□□ 1.93
ATG3-201ENST00000283290 ZMYM4Q5VZL5 1548 aa27.1■■□□□ 1.93
ATG3-201ENST00000283290 ARHGEF12Q9NZN5 1544 aa27.1■■□□□ 1.93
ATG3-201ENST00000283290 SYCP2Q9BX26 1530 aa27.06■■□□□ 1.92
ATG3-201ENST00000283290 ZNF518AQ6AHZ1 1483 aa27.05■■□□□ 1.92
ATG3-201ENST00000283290 ARHGEF40Q8TER5 1519 aa27.05■■□□□ 1.92
ATG3-201ENST00000283290 KDM5CP41229 1560 aa27.04■■□□□ 1.92
ATG3-201ENST00000283290 TRAPPC8Q9Y2L5 1435 aa27.04■■□□□ 1.92
ATG3-201ENST00000283290 MYOM3Q5VTT5 1437 aa27.02■■□□□ 1.92
ATG3-201ENST00000283290 HNRNPMP52272 730 aaKnown RBP eCLIP27.02■■□□□ 1.92
ATG3-201ENST00000283290 AFAP1Q8N556 730 aa27.02■■□□□ 1.92
ATG3-201ENST00000283290 ZFYVE16Q7Z3T8 1539 aa27.02■■□□□ 1.92
ATG3-201ENST00000283290 YEATS2Q9ULM3 1422 aa27.01■■□□□ 1.91
ATG3-201ENST00000283290 CAMSAP2Q08AD1 1489 aa27■■□□□ 1.91
ATG3-201ENST00000283290 PLEKHH2Q8IVE3 1493 aa26.99■■□□□ 1.91
ATG3-201ENST00000283290 MAGI2Q86UL8 1455 aa26.98■■□□□ 1.91
ATG3-201ENST00000283290 HECW2Q9P2P5 1572 aa26.98■■□□□ 1.91
ATG3-201ENST00000283290 KIAA1107Q9UPP5 1409 aa26.97■■□□□ 1.91
ATG3-201ENST00000283290 PTPN23Q9H3S7 1636 aa26.94■■□□□ 1.9
ATG3-201ENST00000283290 SIGLEC1Q9BZZ2 1709 aa26.93■■□□□ 1.9
ATG3-201ENST00000283290 FGD6Q6ZV73 1430 aa26.92■■□□□ 1.9
ATG3-201ENST00000283290 KIDINS220Q9ULH0 1771 aa26.92■■□□□ 1.9
ATG3-201ENST00000283290 MLH3Q9UHC1 1453 aa26.91■■□□□ 1.9
ATG3-201ENST00000283290 MBD5Q9P267 1494 aa26.91■■□□□ 1.9
ATG3-201ENST00000283290 ABCA6Q8N139 1617 aa26.91■■□□□ 1.9
ATG3-201ENST00000283290 KDM4FA0A1W2PPD8 638 aa26.9■■□□□ 1.9
ATG3-201ENST00000283290 MYT1LQ9UL68 1186 aa26.9■■□□□ 1.9
ATG3-201ENST00000283290 DIP2CQ9Y2E4 1556 aa26.89■■□□□ 1.9
ATG3-201ENST00000283290 MIA2Q96PC5 1412 aa26.89■■□□□ 1.89
ATG3-201ENST00000283290 ATP10AO60312 1499 aa26.86■■□□□ 1.89
ATG3-201ENST00000283290 INO80Q9ULG1 1556 aaPredicted RBP26.86■■□□□ 1.89
ATG3-201ENST00000283290 SPAG9O60271 1321 aaKnown RBP26.84■■□□□ 1.89
ATG3-201ENST00000283290 ATP7AQ04656 1500 aa26.84■■□□□ 1.89
ATG3-201ENST00000283290 FAM50AQ14320 339 aaKnown RBP26.84■■□□□ 1.89
ATG3-201ENST00000283290 C9orf84Q5VXU9 1444 aa26.84■■□□□ 1.89
ATG3-201ENST00000283290 BCORL1Q5H9F3 1711 aa26.83■■□□□ 1.89
ATG3-201ENST00000283290 ARID4BQ4LE39 1312 aaPredicted RBP26.83■■□□□ 1.89
ATG3-201ENST00000283290 ARHGEF5Q12774 1597 aa26.82■■□□□ 1.88
ATG3-201ENST00000283290 CCDC141Q6ZP82 1450 aa26.82■■□□□ 1.88
ATG3-201ENST00000283290 TCOF1Q13428 1488 aaKnown RBP26.8■■□□□ 1.88
ATG3-201ENST00000283290 ADAMTSL3P82987 1691 aa26.78■■□□□ 1.88
ATG3-201ENST00000283290 REREQ9P2R6 1566 aa26.78■■□□□ 1.88
ATG3-201ENST00000283290 CROCC2H7BZ55 1655 aa26.76■■□□□ 1.87
ATG3-201ENST00000283290 AEBP2Q6ZN18 517 aaPredicted RBP26.75■■□□□ 1.87
ATG3-201ENST00000283290 DNMT1P26358 1616 aaKnown RBP26.74■■□□□ 1.87
ATG3-201ENST00000283290 MADDQ8WXG6 1647 aa26.73■■□□□ 1.87
ATG3-201ENST00000283290 ABCC5O15440 1437 aa26.73■■□□□ 1.87
ATG3-201ENST00000283290 ADGBQ8N7X0 1667 aa26.72■■□□□ 1.87
ATG3-201ENST00000283290 RSPH4AQ5TD94 716 aa26.72■■□□□ 1.87
ATG3-201ENST00000283290 ITGAEP38570 1179 aa26.71■■□□□ 1.87
ATG3-201ENST00000283290 RTEL1-TNFRSF6BF6WH68 1400 aa26.71■■□□□ 1.87
ATG3-201ENST00000283290 DAPK1P53355 1430 aa26.71■■□□□ 1.87
ATG3-201ENST00000283290 MLECQ14165 292 aa26.7■■□□□ 1.86
ATG3-201ENST00000283290 CHIC2Q9UKJ5 165 aa26.7■■□□□ 1.86
ATG3-201ENST00000283290 MAST1Q9Y2H9 1570 aa26.69■■□□□ 1.86
ATG3-201ENST00000283290 PLXNC1O60486 1568 aa26.68■■□□□ 1.86
ATG3-201ENST00000283290 AGLP35573 1532 aa26.67■■□□□ 1.86
ATG3-201ENST00000283290 A2MP01023 1474 aa26.67■■□□□ 1.86
ATG3-201ENST00000283290 TSPY4P0CV99 314 aa26.67■■□□□ 1.86
ATG3-201ENST00000283290 TSPY10P0CW01 314 aa26.67■■□□□ 1.86
ATG3-201ENST00000283290 RIMS1Q86UR5 1692 aaKnown RBP26.66■■□□□ 1.86
ATG3-201ENST00000283290 FER1L4A9Z1Z3 1794 aa26.66■■□□□ 1.86
ATG3-201ENST00000283290 RRBP1Q9P2E9 1410 aaKnown RBP26.65■■□□□ 1.86
ATG3-201ENST00000283290 PTPRKQ15262 1439 aa26.64■■□□□ 1.86
ATG3-201ENST00000283290 SHANK2Q9UPX8 1470 aa26.6■■□□□ 1.85
ATG3-201ENST00000283290 PTPRMP28827 1452 aa26.59■■□□□ 1.85
ATG3-201ENST00000283290 RRP7BPQ9NSQ0 103 aa26.58■■□□□ 1.85
ATG3-201ENST00000283290 DHX29Q7Z478 1369 aaKnown RBP26.57■■□□□ 1.84
ATG3-201ENST00000283290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.51■■□□□ 1.83
ATG3-201ENST00000283290 KIF15Q9NS87 1388 aa26.5■■□□□ 1.83
ATG3-201ENST00000283290 ANKRD30AQ9BXX3 1397 aa26.48■■□□□ 1.83
ATG3-201ENST00000283290 NCOA1Q15788 1441 aa26.47■■□□□ 1.83
ATG3-201ENST00000283290 DUOX2Q9NRD8 1548 aa26.47■■□□□ 1.83
ATG3-201ENST00000283290 GGT6Q6P531 493 aa26.46■■□□□ 1.83
ATG3-201ENST00000283290 PLPPR3Q6T4P5 718 aa26.46■■□□□ 1.83
ATG3-201ENST00000283290 ADGRL2O95490 1459 aa26.46■■□□□ 1.83
ATG3-201ENST00000283290 KIF3BO15066 747 aa26.46■■□□□ 1.83
ATG3-201ENST00000283290 EIF2AK4Q9P2K8 1649 aaKnown RBP26.45■■□□□ 1.83
ATG3-201ENST00000283290 CLTCQ00610 1675 aaKnown RBP26.45■■□□□ 1.83
ATG3-201ENST00000283290 C3P01024 1663 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms