RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 FAM9BQ8IZU0 186 aa8.71□□□□□ -1.02
LIN7C-201ENST00000278193 SMARCA5O60264 1052 aaPredicted RBP8.71□□□□□ -1.02
LIN7C-201ENST00000278193 MYCNP04198 464 aaPredicted RBP8.69□□□□□ -1.02
LIN7C-201ENST00000278193 GORABQ5T7V8 394 aa8.69□□□□□ -1.02
LIN7C-201ENST00000278193 MYH16Q9H6N6 1097 aa8.69□□□□□ -1.02
LIN7C-201ENST00000278193 SCRIBQ14160 1630 aa8.69□□□□□ -1.02
LIN7C-201ENST00000278193 DEKP35659 375 aaKnown RBP8.69□□□□□ -1.02
LIN7C-201ENST00000278193 PATL2C9JE40 543 aaKnown RBP8.69□□□□□ -1.02
LIN7C-201ENST00000278193 SPDYE4A6NLX3 237 aa8.69□□□□□ -1.02
LIN7C-201ENST00000278193 HMGB1P1B2RPK0 211 aaPredicted RBP8.69□□□□□ -1.02
LIN7C-201ENST00000278193 MCCP23508 829 aa8.68□□□□□ -1.02
LIN7C-201ENST00000278193 ZCCHC6Q5VYS8 1495 aaKnown RBP8.68□□□□□ -1.02
LIN7C-201ENST00000278193 ZC3H15Q8WU90 426 aaKnown RBP8.67□□□□□ -1.02
LIN7C-201ENST00000278193 MKRN3Q13064 507 aaKnown RBP8.67□□□□□ -1.02
LIN7C-201ENST00000278193 GPBP1L1Q9HC44 474 aaPredicted RBP8.66□□□□□ -1.02
LIN7C-201ENST00000278193 DNAJC2Q99543 621 aaKnown RBP8.66□□□□□ -1.02
LIN7C-201ENST00000278193 ZNF777Q9ULD5 760 aaPredicted RBP8.66□□□□□ -1.02
LIN7C-201ENST00000278193 ATP1B4Q9UN42 357 aaPredicted RBP8.66□□□□□ -1.02
LIN7C-201ENST00000278193 CANXP27824 592 aaKnown RBP8.66□□□□□ -1.02
LIN7C-201ENST00000278193 KRI1Q8N9T8 703 aaKnown RBP8.65□□□□□ -1.02
LIN7C-201ENST00000278193 NAP1L2Q9ULW6 460 aaPredicted RBP8.65□□□□□ -1.02
LIN7C-201ENST00000278193 EXOC8Q8IYI6 725 aa8.65□□□□□ -1.03
LIN7C-201ENST00000278193 CCDC125Q86Z20 511 aa8.64□□□□□ -1.03
LIN7C-201ENST00000278193 ANKRD62A6NC57 917 aa8.64□□□□□ -1.03
LIN7C-201ENST00000278193 FLIIQ13045 1269 aa8.62□□□□□ -1.03
LIN7C-201ENST00000278193 RETREG2Q8NC44 543 aa8.62□□□□□ -1.03
LIN7C-201ENST00000278193 CLUAP1Q96AJ1 413 aa8.6□□□□□ -1.03
LIN7C-201ENST00000278193 MAFGO15525 162 aa8.59□□□□□ -1.03
LIN7C-201ENST00000278193 MARCH6O60337 910 aa8.59□□□□□ -1.03
LIN7C-201ENST00000278193 PLEKHD1A6NEE1 506 aa8.59□□□□□ -1.04
LIN7C-201ENST00000278193 FAM193AP78312 1265 aa8.58□□□□□ -1.04
LIN7C-201ENST00000278193 FOSBP53539 338 aa8.57□□□□□ -1.04
LIN7C-201ENST00000278193 ACIN1Q9UKV3 1341 aaKnown RBP8.57□□□□□ -1.04
LIN7C-201ENST00000278193 LOC102724159A0A0B4J2E5 919 aa8.57□□□□□ -1.04
LIN7C-201ENST00000278193 PWP2Q15269 919 aaKnown RBP8.57□□□□□ -1.04
LIN7C-201ENST00000278193 FOXD4L6Q3SYB3 417 aaPredicted RBP8.57□□□□□ -1.04
LIN7C-201ENST00000278193 FOXD4L3Q6VB84 417 aaPredicted RBP8.57□□□□□ -1.04
LIN7C-201ENST00000278193 CNGB1Q14028 1251 aaPredicted RBP8.55□□□□□ -1.04
LIN7C-201ENST00000278193 RBM27Q9P2N5 1060 aaKnown RBP8.55□□□□□ -1.04
LIN7C-201ENST00000278193 TRAK2O60296 914 aa8.55□□□□□ -1.04
LIN7C-201ENST00000278193 RBM26Q5T8P6 1007 aaKnown RBP8.55□□□□□ -1.04
LIN7C-201ENST00000278193 TPD52L2O43399 206 aaKnown RBP8.54□□□□□ -1.04
LIN7C-201ENST00000278193 SERPINA10Q9UK55 444 aa8.54□□□□□ -1.04
LIN7C-201ENST00000278193 PLCD3Q8N3E9 789 aa8.54□□□□□ -1.04
LIN7C-201ENST00000278193 ANP32CO43423 234 aa8.53□□□□□ -1.04
LIN7C-201ENST00000278193 RIPOR2Q9Y4F9 1068 aa8.53□□□□□ -1.04
LIN7C-201ENST00000278193 IPO4Q8TEX9 1081 aaKnown RBP8.53□□□□□ -1.04
LIN7C-201ENST00000278193 DCAF1Q9Y4B6 1507 aa8.52□□□□□ -1.04
LIN7C-201ENST00000278193 SPTY2D1Q68D10 685 aaPredicted RBP8.52□□□□□ -1.05
LIN7C-201ENST00000278193 BRD1O95696 1058 aa8.52□□□□□ -1.05
LIN7C-201ENST00000278193 MAPK8IP2Q13387 824 aaPredicted RBP8.51□□□□□ -1.05
LIN7C-201ENST00000278193 FTSJ3Q8IY81 847 aaKnown RBP8.5□□□□□ -1.05
LIN7C-201ENST00000278193 SECISBP2LQ93073 1101 aaKnown RBP8.5□□□□□ -1.05
LIN7C-201ENST00000278193 KDM4CQ9H3R0 1056 aa8.5□□□□□ -1.05
LIN7C-201ENST00000278193 GRIPAP1Q4V328 841 aa8.49□□□□□ -1.05
LIN7C-201ENST00000278193 SPATA32Q96LK8 384 aa8.49□□□□□ -1.05
LIN7C-201ENST00000278193 WDR78Q5VTH9 848 aa8.49□□□□□ -1.05
LIN7C-201ENST00000278193 TMX4Q9H1E5 349 aaPredicted RBP8.49□□□□□ -1.05
LIN7C-201ENST00000278193 MYO15BQ96JP2 1530 aa8.48□□□□□ -1.05
LIN7C-201ENST00000278193 HS6ST3Q8IZP7 471 aa8.48□□□□□ -1.05
LIN7C-201ENST00000278193 IRF5Q13568 498 aa8.48□□□□□ -1.05
LIN7C-201ENST00000278193 KCNV2Q8TDN2 545 aa8.48□□□□□ -1.05
LIN7C-201ENST00000278193 DRC1Q96MC2 740 aa8.47□□□□□ -1.05
LIN7C-201ENST00000278193 SALL2Q9Y467 1007 aaPredicted RBP8.47□□□□□ -1.05
LIN7C-201ENST00000278193 APPP05067 770 aa8.47□□□□□ -1.05
LIN7C-201ENST00000278193 FAM43BQ6ZT52 329 aaPredicted RBP8.46□□□□□ -1.05
LIN7C-201ENST00000278193 CLGNO14967 610 aa8.46□□□□□ -1.06
LIN7C-201ENST00000278193 PEX14O75381 377 aa8.46□□□□□ -1.06
LIN7C-201ENST00000278193 TMTC2Q8N394 836 aa8.46□□□□□ -1.06
LIN7C-201ENST00000278193 RALBP1Q15311 655 aa8.45□□□□□ -1.06
LIN7C-201ENST00000278193 PPME1Q9Y570 386 aa8.45□□□□□ -1.06
LIN7C-201ENST00000278193 ERCC6Q03468 1493 aa8.45□□□□□ -1.06
LIN7C-201ENST00000278193 SH3BP5O60239 455 aa8.45□□□□□ -1.06
LIN7C-201ENST00000278193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.45□□□□□ -1.06
LIN7C-201ENST00000278193 HNRNPUL2Q1KMD3 747 aaKnown RBP8.45□□□□□ -1.06
LIN7C-201ENST00000278193 MICAL1Q8TDZ2 1067 aa8.45□□□□□ -1.06
LIN7C-201ENST00000278193 AK7Q96M32 723 aa8.45□□□□□ -1.06
LIN7C-201ENST00000278193 CHMP4BQ9H444 224 aaKnown RBP8.44□□□□□ -1.06
LIN7C-201ENST00000278193 TSR1Q2NL82 804 aaKnown RBP8.44□□□□□ -1.06
LIN7C-201ENST00000278193 MORC4Q8TE76 937 aa8.44□□□□□ -1.06
LIN7C-201ENST00000278193 AMOTL2Q9Y2J4 779 aa8.44□□□□□ -1.06
LIN7C-201ENST00000278193 APBB1IPQ7Z5R6 666 aaPredicted RBP8.43□□□□□ -1.06
LIN7C-201ENST00000278193 SLC4A2P04920 1241 aa8.43□□□□□ -1.06
LIN7C-201ENST00000278193 BARGINQ6ZT62 677 aa8.43□□□□□ -1.06
LIN7C-201ENST00000278193 HIRIP3Q9BW71 556 aaPredicted RBP8.43□□□□□ -1.06
LIN7C-201ENST00000278193 PHF14O94880 888 aa8.42□□□□□ -1.06
LIN7C-201ENST00000278193 TERF2IPQ9NYB0 399 aa8.42□□□□□ -1.06
LIN7C-201ENST00000278193 ANP32BQ92688 251 aaKnown RBP8.41□□□□□ -1.06
LIN7C-201ENST00000278193 ZNF622Q969S3 477 aaKnown RBP eCLIP8.41□□□□□ -1.06
LIN7C-201ENST00000278193 SPINK5Q9NQ38 1064 aaPredicted RBP8.4□□□□□ -1.06
LIN7C-201ENST00000278193 BAZ1BQ9UIG0 1483 aaKnown RBP8.39□□□□□ -1.07
LIN7C-201ENST00000278193 CALRP27797 417 aaKnown RBP8.39□□□□□ -1.07
LIN7C-201ENST00000278193 A6NJR5 290 aa8.39□□□□□ -1.07
LIN7C-201ENST00000278193 STK25O00506 426 aa8.39□□□□□ -1.07
LIN7C-201ENST00000278193 SMYD5Q6GMV2 418 aa8.39□□□□□ -1.07
LIN7C-201ENST00000278193 GTPBP6O43824 516 aaPredicted RBP8.38□□□□□ -1.07
LIN7C-201ENST00000278193 FOXD1Q16676 465 aa8.38□□□□□ -1.07
LIN7C-201ENST00000278193 SREK1Q8WXA9 508 aaKnown RBP8.38□□□□□ -1.07
LIN7C-201ENST00000278193 CASC1Q6TDU7 716 aa8.38□□□□□ -1.07
LIN7C-201ENST00000278193 PROSER2Q86WR7 435 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms