RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 TSPY4P0CV99 314 aa13.55□□□□□ -0.24
CPT1A-201ENST00000265641 TSPY10P0CW01 314 aa13.55□□□□□ -0.24
CPT1A-201ENST00000265641 CARD11Q9BXL7 1154 aa13.55□□□□□ -0.24
CPT1A-201ENST00000265641 HSPA5P11021 654 aaKnown RBP13.54□□□□□ -0.24
CPT1A-201ENST00000265641 PDE4AP27815 886 aa13.54□□□□□ -0.24
CPT1A-201ENST00000265641 PPP1R15AO75807 674 aaPredicted RBP13.54□□□□□ -0.24
CPT1A-201ENST00000265641 RCAN3Q9UKA8 241 aa13.54□□□□□ -0.24
CPT1A-201ENST00000265641 TAF3Q5VWG9 929 aa13.52□□□□□ -0.24
CPT1A-201ENST00000265641 FTSJ3Q8IY81 847 aaKnown RBP13.52□□□□□ -0.25
CPT1A-201ENST00000265641 ISY1Q9ULR0 285 aaKnown RBP13.52□□□□□ -0.25
CPT1A-201ENST00000265641 KNSTRNQ9Y448 316 aa13.51□□□□□ -0.25
CPT1A-201ENST00000265641 RAB3GAP2Q9H2M9 1393 aa13.51□□□□□ -0.25
CPT1A-201ENST00000265641 A0A0U1RQG5 324 aaPredicted RBP13.51□□□□□ -0.25
CPT1A-201ENST00000265641 PHF14O94880 888 aa13.51□□□□□ -0.25
CPT1A-201ENST00000265641 FAM161AQ3B820 660 aa13.5□□□□□ -0.25
CPT1A-201ENST00000265641 ZBED9Q6R2W3 1325 aa13.5□□□□□ -0.25
CPT1A-201ENST00000265641 GOLGA6L1Q8N7Z2 621 aa13.5□□□□□ -0.25
CPT1A-201ENST00000265641 FBLN2P98095 1184 aa13.5□□□□□ -0.25
CPT1A-201ENST00000265641 DHX57Q6P158 1386 aaKnown RBP13.49□□□□□ -0.25
CPT1A-201ENST00000265641 CALRP27797 417 aaKnown RBP13.49□□□□□ -0.25
CPT1A-201ENST00000265641 ZNF771Q7L3S4 317 aaPredicted RBP13.49□□□□□ -0.25
CPT1A-201ENST00000265641 CCDC66A2RUB6 948 aa13.48□□□□□ -0.25
CPT1A-201ENST00000265641 MRE11P49959 708 aa13.48□□□□□ -0.25
CPT1A-201ENST00000265641 CALD1Q05682 793 aaKnown RBP13.48□□□□□ -0.25
CPT1A-201ENST00000265641 PLCB2Q00722 1185 aa13.48□□□□□ -0.25
CPT1A-201ENST00000265641 SETQ01105 290 aaPredicted RBP13.48□□□□□ -0.25
CPT1A-201ENST00000265641 GZF1Q9H116 711 aaPredicted RBP13.48□□□□□ -0.25
CPT1A-201ENST00000265641 CENPQQ7L2Z9 268 aaPredicted RBP13.47□□□□□ -0.25
CPT1A-201ENST00000265641 PMFBP1Q8TBY8 1022 aa13.47□□□□□ -0.25
CPT1A-201ENST00000265641 PHLDB1Q86UU1 1377 aa13.47□□□□□ -0.25
CPT1A-201ENST00000265641 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.253e-6■■□□□ 12.8
CPT1A-201ENST00000265641 SLKQ9H2G2 1235 aaPredicted RBP13.47□□□□□ -0.25
CPT1A-201ENST00000265641 NCAPD3P42695 1498 aa13.46□□□□□ -0.25
CPT1A-201ENST00000265641 RALBP1Q15311 655 aa13.46□□□□□ -0.25
CPT1A-201ENST00000265641 KANK4Q5T7N3 995 aaPredicted RBP13.46□□□□□ -0.26
CPT1A-201ENST00000265641 HTATSF1O43719 755 aaKnown RBP13.46□□□□□ -0.26
CPT1A-201ENST00000265641 CFAP53Q96M91 514 aa13.46□□□□□ -0.26
CPT1A-201ENST00000265641 FHAD1B1AJZ9 1412 aa13.45□□□□□ -0.26
CPT1A-201ENST00000265641 MCCP23508 829 aa13.45□□□□□ -0.26
CPT1A-201ENST00000265641 FRAT1Q92837 279 aaPredicted RBP13.45□□□□□ -0.26
CPT1A-201ENST00000265641 MAPK8IP3Q9UPT6 1336 aa13.45□□□□□ -0.26
CPT1A-201ENST00000265641 RWDD1Q9H446 243 aaPredicted RBP13.44□□□□□ -0.26
CPT1A-201ENST00000265641 NFKBIBQ15653 356 aa13.44□□□□□ -0.26
CPT1A-201ENST00000265641 DRC7Q8IY82 874 aa13.44□□□□□ -0.26
CPT1A-201ENST00000265641 IL27Q8NEV9 243 aa13.44□□□□□ -0.26
CPT1A-201ENST00000265641 PEG3Q9GZU2 1588 aa13.43□□□□□ -0.26
CPT1A-201ENST00000265641 CHGAP10645 457 aaKnown RBP13.43□□□□□ -0.26
CPT1A-201ENST00000265641 HMGXB3Q12766 1538 aa13.43□□□□□ -0.26
CPT1A-201ENST00000265641 TEX35Q5T0J7 233 aa13.42□□□□□ -0.26
CPT1A-201ENST00000265641 FAM13BQ9NYF5 915 aa13.42□□□□□ -0.26
CPT1A-201ENST00000265641 NOM1Q5C9Z4 860 aaKnown RBP13.41□□□□□ -0.26
CPT1A-201ENST00000265641 GOLGA6L4A6NEF3 574 aa13.41□□□□□ -0.26
CPT1A-201ENST00000265641 ROCK2O75116 1388 aaKnown RBP13.41□□□□□ -0.26
CPT1A-201ENST00000265641 SPRYD3Q8NCJ5 442 aa13.41□□□□□ -0.26
CPT1A-201ENST00000265641 CADPSQ9ULU8 1353 aa13.4□□□□□ -0.26
CPT1A-201ENST00000265641 RGL3Q3MIN7 710 aa13.4□□□□□ -0.26
CPT1A-201ENST00000265641 CC2D1BQ5T0F9 858 aaKnown RBP13.4□□□□□ -0.26
CPT1A-201ENST00000265641 CHMP5Q9NZZ3 219 aa13.39□□□□□ -0.27
CPT1A-201ENST00000265641 ARID3AQ99856 593 aa13.39□□□□□ -0.27
CPT1A-201ENST00000265641 CUX2O14529 1486 aa13.39□□□□□ -0.27
CPT1A-201ENST00000265641 KIF21BO75037 1637 aa13.39□□□□□ -0.27
CPT1A-201ENST00000265641 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
CPT1A-201ENST00000265641 GPS2Q13227 327 aa13.38□□□□□ -0.27
CPT1A-201ENST00000265641 NEUROD2Q15784 382 aa13.38□□□□□ -0.27
CPT1A-201ENST00000265641 KTN1Q86UP2 1357 aaKnown RBP13.38□□□□□ -0.27
CPT1A-201ENST00000265641 APPP05067 770 aa13.37□□□□□ -0.27
CPT1A-201ENST00000265641 HMGN5P82970 282 aaKnown RBP13.37□□□□□ -0.27
CPT1A-201ENST00000265641 BRPF3Q9ULD4 1205 aa13.37□□□□□ -0.27
CPT1A-201ENST00000265641 DIAPH3Q9NSV4 1193 aa13.36□□□□□ -0.27
CPT1A-201ENST00000265641 EIF4G1Q04637 1599 aaKnown RBP13.36□□□□□ -0.27
CPT1A-201ENST00000265641 CARMIL1Q5VZK9 1371 aa13.36□□□□□ -0.27
CPT1A-201ENST00000265641 TSPYL1Q9H0U9 437 aa13.35□□□□□ -0.27
CPT1A-201ENST00000265641 ARHGAP35Q9NRY4 1499 aa13.35□□□□□ -0.27
CPT1A-201ENST00000265641 RRP1P56182 461 aaKnown RBP13.35□□□□□ -0.27
CPT1A-201ENST00000265641 PDCL3Q9H2J4 239 aa13.34□□□□□ -0.27
CPT1A-201ENST00000265641 CCDC39Q9UFE4 941 aa13.34□□□□□ -0.27
CPT1A-201ENST00000265641 TPM3P06753 285 aa13.34□□□□□ -0.27
CPT1A-201ENST00000265641 CCDC173Q0VFZ6 552 aa13.34□□□□□ -0.27
CPT1A-201ENST00000265641 CWC15Q9P013 229 aaKnown RBP13.34□□□□□ -0.27
CPT1A-201ENST00000265641 UNC13AQ9UPW8 1703 aa13.34□□□□□ -0.27
CPT1A-201ENST00000265641 KIF16BQ96L93 1317 aa13.33□□□□□ -0.27
CPT1A-201ENST00000265641 TPM4P67936 248 aa13.33□□□□□ -0.28
CPT1A-201ENST00000265641 TMF1P82094 1093 aa13.33□□□□□ -0.28
CPT1A-201ENST00000265641 PRKRIP1Q9H875 184 aaPredicted RBP13.33□□□□□ -0.28
CPT1A-201ENST00000265641 PDS5BQ9NTI5 1447 aa13.33□□□□□ -0.28
CPT1A-201ENST00000265641 CFDP1Q9UEE9 299 aaPredicted RBP13.32□□□□□ -0.28
CPT1A-201ENST00000265641 DDX49Q9Y6V7 483 aaKnown RBP13.31□□□□□ -0.28
CPT1A-201ENST00000265641 ERICH3Q5RHP9 1530 aa13.31□□□□□ -0.28
CPT1A-201ENST00000265641 AAMPQ13685 434 aa13.31□□□□□ -0.28
CPT1A-201ENST00000265641 SLC4A3P48751 1232 aa13.3□□□□□ -0.28
CPT1A-201ENST00000265641 RAPGEF2Q9Y4G8 1499 aa13.3□□□□□ -0.28
CPT1A-201ENST00000265641 IPO8O15397 1037 aaKnown RBP13.3□□□□□ -0.28
CPT1A-201ENST00000265641 TPRNQ4KMQ1 711 aa13.29□□□□□ -0.28
CPT1A-201ENST00000265641 NLRP13Q86W25 1043 aa13.29□□□□□ -0.28
CPT1A-201ENST00000265641 EIF3AQ14152 1382 aaKnown RBP13.29□□□□□ -0.28
CPT1A-201ENST00000265641 HAP1P54257 671 aaPredicted RBP13.29□□□□□ -0.28
CPT1A-201ENST00000265641 EXOC6Q8TAG9 804 aa13.29□□□□□ -0.28
CPT1A-201ENST00000265641 TOP2BQ02880 1626 aa13.28□□□□□ -0.28
CPT1A-201ENST00000265641 DCAF11Q8TEB1 546 aa13.28□□□□□ -0.28
CPT1A-201ENST00000265641 ZMYND15Q9H091 742 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms