RNA–Protein interactions for RNA: ENST00000255531.8

PCDH19-201, Transcript of protocadherin 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH19, Length 7,937 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-201ENST00000255531 CFAP53Q96M91 514 aa12.01□□□□□ -0.49
PCDH19-201ENST00000255531 HSP90B2PQ58FF3 399 aa12□□□□□ -0.49
PCDH19-201ENST00000255531 CSRNP3Q8WYN3 585 aa12□□□□□ -0.49
PCDH19-201ENST00000255531 TIMELESSQ9UNS1 1208 aa12□□□□□ -0.49
PCDH19-201ENST00000255531 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.99□□□□□ -0.49
PCDH19-201ENST00000255531 FAM13BQ9NYF5 915 aa11.99□□□□□ -0.49
PCDH19-201ENST00000255531 MIER1Q8N108 512 aa11.99□□□□□ -0.49
PCDH19-201ENST00000255531 RBM19Q9Y4C8 960 aaKnown RBP11.99□□□□□ -0.49
PCDH19-201ENST00000255531 CHGAP10645 457 aaKnown RBP11.98□□□□□ -0.49
PCDH19-201ENST00000255531 TAF3Q5VWG9 929 aa11.97□□□□□ -0.49
PCDH19-201ENST00000255531 DDX11L8A8MPP1 907 aa11.97□□□□□ -0.49
PCDH19-201ENST00000255531 USP8P40818 1118 aa11.97□□□□□ -0.49
PCDH19-201ENST00000255531 GOLGA6L19H0YKK7 550 aa11.97□□□□□ -0.49
PCDH19-201ENST00000255531 TPM2P07951 284 aa11.97□□□□□ -0.49
PCDH19-201ENST00000255531 KIF3AQ9Y496 699 aa11.96□□□□□ -0.5
PCDH19-201ENST00000255531 DEF6Q9H4E7 631 aa11.95□□□□□ -0.5
PCDH19-201ENST00000255531 CREBRFQ8IUR6 639 aa11.95□□□□□ -0.5
PCDH19-201ENST00000255531 NPHP1O15259 732 aa11.95□□□□□ -0.5
PCDH19-201ENST00000255531 TPD52L1Q16890 204 aaPredicted RBP11.94□□□□□ -0.5
PCDH19-201ENST00000255531 IPO7O95373 1038 aaKnown RBP11.94□□□□□ -0.5
PCDH19-201ENST00000255531 LEKR1Q6ZMV7 388 aa11.94□□□□□ -0.5
PCDH19-201ENST00000255531 CAGE1Q8TC20 777 aa11.94□□□□□ -0.5
PCDH19-201ENST00000255531 ISY1Q9ULR0 285 aaKnown RBP11.94□□□□□ -0.5
PCDH19-201ENST00000255531 GOLGA6L7A0A1B0GV03 622 aa11.94□□□□□ -0.5
PCDH19-201ENST00000255531 KIF16BQ96L93 1317 aa11.93□□□□□ -0.5
PCDH19-201ENST00000255531 KRI1Q8N9T8 703 aaKnown RBP11.92□□□□□ -0.5
PCDH19-201ENST00000255531 ZNF592Q92610 1267 aa11.92□□□□□ -0.5
PCDH19-201ENST00000255531 RASSF8Q8NHQ8 419 aa11.92□□□□□ -0.5
PCDH19-201ENST00000255531 SKOR2Q2VWA4 1001 aaPredicted RBP11.91□□□□□ -0.5
PCDH19-201ENST00000255531 ERCC4Q92889 916 aaPredicted RBP11.91□□□□□ -0.5
PCDH19-201ENST00000255531 PES1O00541 588 aaKnown RBP11.91□□□□□ -0.5
PCDH19-201ENST00000255531 SLKQ9H2G2 1235 aaPredicted RBP11.91□□□□□ -0.5
PCDH19-201ENST00000255531 EIF4G2P78344 907 aaKnown RBP eCLIP11.91□□□□□ -0.5
PCDH19-201ENST00000255531 B4GALNT3Q6L9W6 998 aa11.91□□□□□ -0.5
PCDH19-201ENST00000255531 FRAT1Q92837 279 aaPredicted RBP11.9□□□□□ -0.5
PCDH19-201ENST00000255531 MYO6Q9UM54 1294 aa11.9□□□□□ -0.5
PCDH19-201ENST00000255531 MAPK8IP3Q9UPT6 1336 aa11.9□□□□□ -0.5
PCDH19-201ENST00000255531 TCERG1O14776 1098 aaKnown RBP11.89□□□□□ -0.51
PCDH19-201ENST00000255531 IPO9Q96P70 1041 aaKnown RBP11.89□□□□□ -0.51
PCDH19-201ENST00000255531 HOMER1Q86YM7 354 aa11.88□□□□□ -0.51
PCDH19-201ENST00000255531 TSPYL1Q9H0U9 437 aa11.88□□□□□ -0.51
PCDH19-201ENST00000255531 DIAPH3Q9NSV4 1193 aa11.88□□□□□ -0.51
PCDH19-201ENST00000255531 BCCIPQ9P287 314 aaKnown RBP eCLIP11.88□□□□□ -0.51
PCDH19-201ENST00000255531 KIAA0754O94854 1291 aa11.88□□□□□ -0.51
PCDH19-201ENST00000255531 GSE1Q14687 1217 aa11.87□□□□□ -0.51
PCDH19-201ENST00000255531 BECN2A8MW95 431 aa11.87□□□□□ -0.51
PCDH19-201ENST00000255531 GIMAP7Q8NHV1 300 aa11.87□□□□□ -0.51
PCDH19-201ENST00000255531 FAM43AQ8N2R8 423 aa11.87□□□□□ -0.51
PCDH19-201ENST00000255531 CDCA8Q53HL2 280 aa11.87□□□□□ -0.51
PCDH19-201ENST00000255531 SEPT11Q9NVA2 429 aaKnown RBP11.87□□□□□ -0.51
PCDH19-201ENST00000255531 CLASRPQ8N2M8 674 aaKnown RBP11.87□□□□□ -0.51
PCDH19-201ENST00000255531 ZNF777Q9ULD5 760 aaPredicted RBP11.86□□□□□ -0.51
PCDH19-201ENST00000255531 KNSTRNQ9Y448 316 aa11.85□□□□□ -0.51
PCDH19-201ENST00000255531 ANKRD20A12PQ8NF67 263 aa11.85□□□□□ -0.51
PCDH19-201ENST00000255531 CCDC173Q0VFZ6 552 aa11.85□□□□□ -0.51
PCDH19-201ENST00000255531 MNS1Q8NEH6 495 aa11.85□□□□□ -0.51
PCDH19-201ENST00000255531 SF3A1Q15459 793 aaKnown RBP11.84□□□□□ -0.51
PCDH19-201ENST00000255531 ATP6V1DQ9Y5K8 247 aa11.84□□□□□ -0.51
PCDH19-201ENST00000255531 NUDCQ9Y266 331 aa11.84□□□□□ -0.51
PCDH19-201ENST00000255531 C14orf37Q86TY3 774 aa11.83□□□□□ -0.52
PCDH19-201ENST00000255531 ST18O60284 1047 aa11.82□□□□□ -0.52
PCDH19-201ENST00000255531 HAP1P54257 671 aaPredicted RBP11.82□□□□□ -0.52
PCDH19-201ENST00000255531 GPATCH3Q96I76 525 aa11.82□□□□□ -0.52
PCDH19-201ENST00000255531 CHMP4CQ96CF2 233 aa11.82□□□□□ -0.52
PCDH19-201ENST00000255531 RALBP1Q15311 655 aa11.81□□□□□ -0.52
PCDH19-201ENST00000255531 PRKCSHP14314 528 aaPredicted RBP11.81□□□□□ -0.52
PCDH19-201ENST00000255531 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.8□□□□□ -0.52
PCDH19-201ENST00000255531 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.8□□□□□ -0.52
PCDH19-201ENST00000255531 HOOK1Q9UJC3 728 aaKnown RBP11.8□□□□□ -0.52
PCDH19-201ENST00000255531 KDM2AQ9Y2K7 1162 aa11.8□□□□□ -0.52
PCDH19-201ENST00000255531 HMGB1P09429 215 aaKnown RBP11.79□□□□□ -0.52
PCDH19-201ENST00000255531 RSPH4AQ5TD94 716 aa11.79□□□□□ -0.52
PCDH19-201ENST00000255531 ODF2Q5BJF6 829 aa11.79□□□□□ -0.52
PCDH19-201ENST00000255531 NF2P35240 595 aa11.78□□□□□ -0.52
PCDH19-201ENST00000255531 ANKRD18AQ8IVF6 992 aa11.78□□□□□ -0.52
PCDH19-201ENST00000255531 PCMTD1Q96MG8 357 aaPredicted RBP11.78□□□□□ -0.52
PCDH19-201ENST00000255531 SPATA24Q86W54 205 aa11.78□□□□□ -0.52
PCDH19-201ENST00000255531 DDX49Q9Y6V7 483 aaKnown RBP11.78□□□□□ -0.52
PCDH19-201ENST00000255531 GOLGA6L10A6NI86 522 aa11.77□□□□□ -0.52
PCDH19-201ENST00000255531 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.52
PCDH19-201ENST00000255531 CT47B1P0C2W7 299 aaPredicted RBP11.76□□□□□ -0.53
PCDH19-201ENST00000255531 EZRP15311 586 aaKnown RBP11.76□□□□□ -0.53
PCDH19-201ENST00000255531 IPO8O15397 1037 aaKnown RBP11.76□□□□□ -0.53
PCDH19-201ENST00000255531 H3BQV1 296 aa11.76□□□□□ -0.53
PCDH19-201ENST00000255531 IFFO2Q5TF58 517 aa11.76□□□□□ -0.53
PCDH19-201ENST00000255531 DCAF1Q9Y4B6 1507 aa11.76□□□□□ -0.53
PCDH19-201ENST00000255531 MARCH6O60337 910 aa11.76□□□□□ -0.53
PCDH19-201ENST00000255531 AXDND1Q5T1B0 1012 aaPredicted RBP11.75□□□□□ -0.53
PCDH19-201ENST00000255531 IFT57Q9NWB7 429 aa11.75□□□□□ -0.53
PCDH19-201ENST00000255531 CT47A1Q5JQC4 288 aaPredicted RBP11.75□□□□□ -0.53
PCDH19-201ENST00000255531 CFAP57Q96MR6 1250 aa11.75□□□□□ -0.53
PCDH19-201ENST00000255531 NEUROD2Q15784 382 aa11.75□□□□□ -0.53
PCDH19-201ENST00000255531 RWDD1Q9H446 243 aaPredicted RBP11.75□□□□□ -0.53
PCDH19-201ENST00000255531 CCAR1Q8IX12 1150 aaKnown RBP11.74□□□□□ -0.53
PCDH19-201ENST00000255531 CCDC47Q96A33 483 aaKnown RBP11.74□□□□□ -0.53
PCDH19-201ENST00000255531 ERLIN2O94905 339 aa11.74□□□□□ -0.53
PCDH19-201ENST00000255531 NAP1L1P55209 391 aaKnown RBP11.74□□□□□ -0.53
PCDH19-201ENST00000255531 SEPT7Q16181 437 aaKnown RBP11.74□□□□□ -0.53
PCDH19-201ENST00000255531 WWC1Q8IX03 1113 aa11.74□□□□□ -0.53
PCDH19-201ENST00000255531 HSP90AB2PQ58FF8 381 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms