RNA–Protein interactions for RNA: ENST00000243347.4

TNFAIP6-201, Transcript of TNF alpha induced protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP6, Length 1,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP6-201ENST00000243347 SNPHO15079 494 aa14.15□□□□□ -0.14
TNFAIP6-201ENST00000243347 GTPBP6O43824 516 aaPredicted RBP14.12□□□□□ -0.15
TNFAIP6-201ENST00000243347 HOXB3P14651 431 aaPredicted RBP14.08□□□□□ -0.15
TNFAIP6-201ENST00000243347 C2orf72A6NCS6 295 aa14.07□□□□□ -0.16
TNFAIP6-201ENST00000243347 RYDENQ9NUL5 291 aaKnown RBP14.06□□□□□ -0.16
TNFAIP6-201ENST00000243347 KIF3CO14782 793 aa14.05□□□□□ -0.16
TNFAIP6-201ENST00000243347 BBXQ8WY36 941 aaPredicted RBP14.02□□□□□ -0.16
TNFAIP6-201ENST00000243347 MARVELD3Q96A59 401 aa14.02□□□□□ -0.16
TNFAIP6-201ENST00000243347 TMC2Q8TDI7 906 aa13.99□□□□□ -0.17
TNFAIP6-201ENST00000243347 DOK7Q18PE1 504 aa13.98□□□□□ -0.17
TNFAIP6-201ENST00000243347 ZNF710Q8N1W2 664 aa13.98□□□□□ -0.17
TNFAIP6-201ENST00000243347 MMRN1Q13201 1228 aa13.95□□□□□ -0.18
TNFAIP6-201ENST00000243347 GPHNQ9NQX3 736 aaPredicted RBP13.91□□□□□ -0.18
TNFAIP6-201ENST00000243347 HOXB1P14653 301 aaPredicted RBP13.9□□□□□ -0.18
TNFAIP6-201ENST00000243347 RIMBP2O15034 1052 aa13.9□□□□□ -0.19
TNFAIP6-201ENST00000243347 EMP3P54852 163 aa13.9□□□□□ -0.19
TNFAIP6-201ENST00000243347 GPR153Q6NV75 609 aa13.89□□□□□ -0.19
TNFAIP6-201ENST00000243347 DSG2Q14126 1118 aa13.88□□□□□ -0.19
TNFAIP6-201ENST00000243347 ARSIQ5FYB1 569 aa13.88□□□□□ -0.19
TNFAIP6-201ENST00000243347 KHSRPQ92945 711 aaKnown RBP eCLIP13.88□□□□□ -0.19
TNFAIP6-201ENST00000243347 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.88□□□□□ -0.19
TNFAIP6-201ENST00000243347 FOXK1P85037 733 aa13.87□□□□□ -0.19
TNFAIP6-201ENST00000243347 SPNS2Q8IVW8 549 aa13.87□□□□□ -0.19
TNFAIP6-201ENST00000243347 NCKAP5LQ9HCH0 1330 aa13.86□□□□□ -0.19
TNFAIP6-201ENST00000243347 POTEB3A0JP26 581 aa13.86□□□□□ -0.19
TNFAIP6-201ENST00000243347 POTEBQ6S5H4 581 aa13.86□□□□□ -0.19
TNFAIP6-201ENST00000243347 CADPS2Q86UW7 1296 aa13.86□□□□□ -0.19
TNFAIP6-201ENST00000243347 PLPP6Q8IY26 295 aa13.86□□□□□ -0.19
TNFAIP6-201ENST00000243347 SPRYD3Q8NCJ5 442 aa13.86□□□□□ -0.19
TNFAIP6-201ENST00000243347 CRISPLD2Q9H0B8 497 aa13.86□□□□□ -0.19
TNFAIP6-201ENST00000243347 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
TNFAIP6-201ENST00000243347 ZSWIM6Q9HCJ5 1215 aa13.85□□□□□ -0.19
TNFAIP6-201ENST00000243347 PAXIP1Q6ZW49 1069 aaPredicted RBP13.84□□□□□ -0.19
TNFAIP6-201ENST00000243347 CFAP44Q96MT7 982 aa13.84□□□□□ -0.19
TNFAIP6-201ENST00000243347 PDE4AP27815 886 aa13.81□□□□□ -0.2
TNFAIP6-201ENST00000243347 HS3ST6Q96QI5 342 aa13.81□□□□□ -0.2
TNFAIP6-201ENST00000243347 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
TNFAIP6-201ENST00000243347 SLC34A2O95436 690 aa13.79□□□□□ -0.2
TNFAIP6-201ENST00000243347 PCDHGA4Q9Y5G9 962 aa13.78□□□□□ -0.2
TNFAIP6-201ENST00000243347 ERBB3P21860 1342 aa13.77□□□□□ -0.21
TNFAIP6-201ENST00000243347 PPP1R15BQ5SWA1 713 aa13.76□□□□□ -0.21
TNFAIP6-201ENST00000243347 NUDT7P0C024 238 aa13.75□□□□□ -0.21
TNFAIP6-201ENST00000243347 VARS2Q5ST30 1063 aaKnown RBP13.73□□□□□ -0.21
TNFAIP6-201ENST00000243347 PTCD2Q8WV60 388 aaKnown RBP13.72□□□□□ -0.21
TNFAIP6-201ENST00000243347 DDX27Q96GQ7 796 aaKnown RBP13.72□□□□□ -0.21
TNFAIP6-201ENST00000243347 MFSD10Q14728 455 aa13.69□□□□□ -0.22
TNFAIP6-201ENST00000243347 UPF1Q92900 1129 aaKnown RBP eCLIP13.69□□□□□ -0.22
TNFAIP6-201ENST00000243347 ZNF316A6NFI3 1004 aaPredicted RBP13.68□□□□□ -0.22
TNFAIP6-201ENST00000243347 LHX6Q9UPM6 363 aa13.66□□□□□ -0.22
TNFAIP6-201ENST00000243347 OXER1Q8TDS5 423 aa13.64□□□□□ -0.23
TNFAIP6-201ENST00000243347 KDM4FA0A1W2PPD8 638 aa13.64□□□□□ -0.23
TNFAIP6-201ENST00000243347 TBC1D12O60347 775 aa13.63□□□□□ -0.23
TNFAIP6-201ENST00000243347 KRTAP3-3Q9BYR6 98 aa13.63□□□□□ -0.23
TNFAIP6-201ENST00000243347 KRTAP3-2Q9BYR7 98 aa13.63□□□□□ -0.23
TNFAIP6-201ENST00000243347 EMILIN3Q9NT22 766 aa13.6□□□□□ -0.23
TNFAIP6-201ENST00000243347 ZNF687Q8N1G0 1237 aa13.59□□□□□ -0.23
TNFAIP6-201ENST00000243347 TSHZ2Q9NRE2 1034 aa13.57□□□□□ -0.24
TNFAIP6-201ENST00000243347 MAP3K9P80192 1104 aa13.53□□□□□ -0.24
TNFAIP6-201ENST00000243347 CAMK2BQ13554 666 aa13.51□□□□□ -0.25
TNFAIP6-201ENST00000243347 EVI5O60447 810 aa13.5□□□□□ -0.25
TNFAIP6-201ENST00000243347 POTEEQ6S8J3 1075 aa13.49□□□□□ -0.25
TNFAIP6-201ENST00000243347 AXIN2Q9Y2T1 843 aa13.48□□□□□ -0.25
TNFAIP6-201ENST00000243347 ANO8Q9HCE9 1232 aaPredicted RBP13.47□□□□□ -0.25
TNFAIP6-201ENST00000243347 DPYSL4O14531 572 aa13.46□□□□□ -0.26
TNFAIP6-201ENST00000243347 WDR70Q9NW82 654 aa13.46□□□□□ -0.26
TNFAIP6-201ENST00000243347 PSDA5PKW4 1024 aaPredicted RBP13.44□□□□□ -0.26
TNFAIP6-201ENST00000243347 PLCB2Q00722 1185 aa13.44□□□□□ -0.26
TNFAIP6-201ENST00000243347 ZNF454Q8N9F8 522 aa13.43□□□□□ -0.26
TNFAIP6-201ENST00000243347 E2F4Q16254 413 aa13.41□□□□□ -0.26
TNFAIP6-201ENST00000243347 PPP4R3BQ5MIZ7 849 aa13.41□□□□□ -0.26
TNFAIP6-201ENST00000243347 ANKRD13DQ6ZTN6 518 aa13.41□□□□□ -0.26
TNFAIP6-201ENST00000243347 FOSBP53539 338 aa13.39□□□□□ -0.27
TNFAIP6-201ENST00000243347 PSEN2P49810 448 aa13.38□□□□□ -0.27
TNFAIP6-201ENST00000243347 ARHGAP33O14559 1287 aa13.37□□□□□ -0.27
TNFAIP6-201ENST00000243347 PBX2P40425 430 aa13.37□□□□□ -0.27
TNFAIP6-201ENST00000243347 LSM11P83369 360 aaKnown RBP eCLIP13.37□□□□□ -0.27
TNFAIP6-201ENST00000243347 DMRTA1Q5VZB9 504 aa13.34□□□□□ -0.27
TNFAIP6-201ENST00000243347 JPH4Q96JJ6 628 aa13.34□□□□□ -0.27
TNFAIP6-201ENST00000243347 PCDHGA10Q9Y5H3 936 aa13.32□□□□□ -0.28
TNFAIP6-201ENST00000243347 KCNK17Q96T54 332 aa13.31□□□□□ -0.28
TNFAIP6-201ENST00000243347 ZDHHC16Q969W1 377 aa13.3□□□□□ -0.28
TNFAIP6-201ENST00000243347 ADAM33Q9BZ11 813 aa13.3□□□□□ -0.28
TNFAIP6-201ENST00000243347 BCL2L12Q9HB09 334 aa13.3□□□□□ -0.28
TNFAIP6-201ENST00000243347 HAP1P54257 671 aaPredicted RBP13.29□□□□□ -0.28
TNFAIP6-201ENST00000243347 DDX12PQ92771 950 aa13.29□□□□□ -0.28
TNFAIP6-201ENST00000243347 PDIA6Q15084 440 aa13.27□□□□□ -0.29
TNFAIP6-201ENST00000243347 PHF14O94880 888 aa13.26□□□□□ -0.29
TNFAIP6-201ENST00000243347 ARIH1Q9Y4X5 557 aaPredicted RBP13.26□□□□□ -0.29
TNFAIP6-201ENST00000243347 PTGER2P43116 358 aa13.24□□□□□ -0.29
TNFAIP6-201ENST00000243347 ADGRD1Q6QNK2 874 aa13.24□□□□□ -0.29
TNFAIP6-201ENST00000243347 SPDYE16A6NNV3 312 aaPredicted RBP13.23□□□□□ -0.29
TNFAIP6-201ENST00000243347 PTPREP23469 700 aa13.23□□□□□ -0.29
TNFAIP6-201ENST00000243347 TYW1BQ6NUM6 668 aa13.23□□□□□ -0.29
TNFAIP6-201ENST00000243347 KCNV2Q8TDN2 545 aa13.22□□□□□ -0.29
TNFAIP6-201ENST00000243347 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
TNFAIP6-201ENST00000243347 MYT1LQ9UL68 1186 aa13.22□□□□□ -0.29
TNFAIP6-201ENST00000243347 RBM33Q96EV2 1170 aaKnown RBP13.21□□□□□ -0.3
TNFAIP6-201ENST00000243347 TK2O00142 265 aa13.19□□□□□ -0.3
TNFAIP6-201ENST00000243347 FBXW7Q969H0 707 aa13.19□□□□□ -0.3
TNFAIP6-201ENST00000243347 EPAS1Q99814 870 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms