RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 TICAM2Q86XR7 235 aa6.12□□□□□ -1.43
CDH9-201ENST00000231021 CCDC27Q2M243 656 aa6.11□□□□□ -1.43
CDH9-201ENST00000231021 SPOCK2Q92563 424 aa6.11□□□□□ -1.43
CDH9-201ENST00000231021 PSMD1Q99460 953 aa6.11□□□□□ -1.43
CDH9-201ENST00000231021 CIZ1Q9ULV3 898 aaPredicted RBP6.11□□□□□ -1.43
CDH9-201ENST00000231021 BCCIPQ9P287 314 aaKnown RBP eCLIP6.1□□□□□ -1.43
CDH9-201ENST00000231021 KDM4CQ9H3R0 1056 aa6.1□□□□□ -1.43
CDH9-201ENST00000231021 PROM2Q8N271 834 aa6.1□□□□□ -1.43
CDH9-201ENST00000231021 RSPH4AQ5TD94 716 aa6.09□□□□□ -1.43
CDH9-201ENST00000231021 POM121Q96HA1 1249 aa6.09□□□□□ -1.44
CDH9-201ENST00000231021 BRD1O95696 1058 aa6.08□□□□□ -1.44
CDH9-201ENST00000231021 TRAIPQ9BWF2 469 aa6.07□□□□□ -1.44
CDH9-201ENST00000231021 NAP1L5Q96NT1 182 aaPredicted RBP6.07□□□□□ -1.44
CDH9-201ENST00000231021 PCGF6Q9BYE7 350 aa6.07□□□□□ -1.44
CDH9-201ENST00000231021 POLA2Q14181 598 aa6.06□□□□□ -1.44
CDH9-201ENST00000231021 TRAK2O60296 914 aa6.06□□□□□ -1.44
CDH9-201ENST00000231021 CNPY4Q8N129 248 aa6.05□□□□□ -1.44
CDH9-201ENST00000231021 ZNF662Q6ZS27 426 aa6.05□□□□□ -1.44
CDH9-201ENST00000231021 ZMYND10O75800 440 aa6.04□□□□□ -1.44
CDH9-201ENST00000231021 MYT1LQ9UL68 1186 aa6.04□□□□□ -1.44
CDH9-201ENST00000231021 ACIN1Q9UKV3 1341 aaKnown RBP6.03□□□□□ -1.44
CDH9-201ENST00000231021 ONECUT3O60422 494 aaPredicted RBP6.03□□□□□ -1.44
CDH9-201ENST00000231021 CENPBP07199 599 aaPredicted RBP6.03□□□□□ -1.44
CDH9-201ENST00000231021 FOSBP53539 338 aa6.02□□□□□ -1.45
CDH9-201ENST00000231021 PPP1R1BQ9UD71 204 aaPredicted RBP6.02□□□□□ -1.45
CDH9-201ENST00000231021 CADPSQ9ULU8 1353 aa6.02□□□□□ -1.45
CDH9-201ENST00000231021 PPARGC1BQ86YN6 1023 aaKnown RBP6.02□□□□□ -1.45
CDH9-201ENST00000231021 CCDC125Q86Z20 511 aa6.01□□□□□ -1.45
CDH9-201ENST00000231021 PLEKHG3A1L390 1219 aa6.01□□□□□ -1.45
CDH9-201ENST00000231021 FAM50AQ14320 339 aaKnown RBP6.01□□□□□ -1.45
CDH9-201ENST00000231021 AKT1S1Q96B36 256 aa6□□□□□ -1.45
CDH9-201ENST00000231021 SIRT1Q96EB6 747 aa6□□□□□ -1.45
CDH9-201ENST00000231021 STK24Q9Y6E0 443 aa6□□□□□ -1.45
CDH9-201ENST00000231021 AAMPQ13685 434 aa6□□□□□ -1.45
CDH9-201ENST00000231021 FOXD4L6Q3SYB3 417 aaPredicted RBP6□□□□□ -1.45
CDH9-201ENST00000231021 FOXD4L3Q6VB84 417 aaPredicted RBP6□□□□□ -1.45
CDH9-201ENST00000231021 ABCB7O75027 752 aa6□□□□□ -1.45
CDH9-201ENST00000231021 FAM43BQ6ZT52 329 aaPredicted RBP6□□□□□ -1.45
CDH9-201ENST00000231021 MYO15BQ96JP2 1530 aa5.99□□□□□ -1.45
CDH9-201ENST00000231021 CLSTN1O94985 981 aa5.99□□□□□ -1.45
CDH9-201ENST00000231021 FAM9BQ8IZU0 186 aa5.99□□□□□ -1.45
CDH9-201ENST00000231021 CLSPNQ9HAW4 1339 aa5.98□□□□□ -1.45
CDH9-201ENST00000231021 BARGINQ6ZT62 677 aa5.98□□□□□ -1.45
CDH9-201ENST00000231021 KIAA1522Q9P206 1035 aaPredicted RBP5.98□□□□□ -1.45
CDH9-201ENST00000231021 SLC52A1Q9NWF4 448 aa5.97□□□□□ -1.45
CDH9-201ENST00000231021 LOC102724159A0A0B4J2E5 919 aa5.96□□□□□ -1.46
CDH9-201ENST00000231021 STK25O00506 426 aa5.96□□□□□ -1.46
CDH9-201ENST00000231021 PWP2Q15269 919 aaKnown RBP5.96□□□□□ -1.46
CDH9-201ENST00000231021 RBM26Q5T8P6 1007 aaKnown RBP5.96□□□□□ -1.46
CDH9-201ENST00000231021 SPDYE2BA6NHP3 402 aa5.95□□□□□ -1.46
CDH9-201ENST00000231021 SPDYE6P0CI01 402 aa5.95□□□□□ -1.46
CDH9-201ENST00000231021 SPDYE2Q495Y8 402 aa5.95□□□□□ -1.46
CDH9-201ENST00000231021 NOL8Q76FK4 1167 aaKnown RBP5.95□□□□□ -1.46
CDH9-201ENST00000231021 P3H3Q8IVL6 736 aa5.95□□□□□ -1.46
CDH9-201ENST00000231021 TEX2Q8IWB9 1127 aa5.95□□□□□ -1.46
CDH9-201ENST00000231021 CC2D2BQ6DHV5 1058 aa5.95□□□□□ -1.46
CDH9-201ENST00000231021 MARCH6O60337 910 aa5.95□□□□□ -1.46
CDH9-201ENST00000231021 VTI1AQ96AJ9 217 aa5.95□□□□□ -1.46
CDH9-201ENST00000231021 EVI5LQ96CN4 794 aa5.95□□□□□ -1.46
CDH9-201ENST00000231021 SGSM3Q96HU1 749 aa5.94□□□□□ -1.46
CDH9-201ENST00000231021 ERCC6L2Q5T890 1561 aa5.94□□□□□ -1.46
CDH9-201ENST00000231021 PDE4DQ08499 809 aa5.94□□□□□ -1.46
CDH9-201ENST00000231021 ARIH1Q9Y4X5 557 aaPredicted RBP5.93□□□□□ -1.46
CDH9-201ENST00000231021 NCLP19338 710 aaKnown RBP5.93□□□□□ -1.46
CDH9-201ENST00000231021 GIMAP6Q6P9H5 292 aa5.93□□□□□ -1.46
CDH9-201ENST00000231021 IGSF5Q9NSI5 407 aa5.93□□□□□ -1.46
CDH9-201ENST00000231021 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.93□□□□□ -1.46
CDH9-201ENST00000231021 KAT6BQ8WYB5 2073 aa5.92□□□□□ -1.46
CDH9-201ENST00000231021 KCNG1Q9UIX4 513 aa5.92□□□□□ -1.46
CDH9-201ENST00000231021 PEX14O75381 377 aa5.91□□□□□ -1.46
CDH9-201ENST00000231021 WWC1Q8IX03 1113 aa5.91□□□□□ -1.46
CDH9-201ENST00000231021 CCDC97Q96F63 343 aaPredicted RBP5.91□□□□□ -1.46
CDH9-201ENST00000231021 SKIV2LQ15477 1246 aaKnown RBP5.91□□□□□ -1.46
CDH9-201ENST00000231021 PLCD3Q8N3E9 789 aa5.91□□□□□ -1.46
CDH9-201ENST00000231021 TESPA1A2RU30 521 aaPredicted RBP5.9□□□□□ -1.46
CDH9-201ENST00000231021 TRIM66O15016 1216 aa5.9□□□□□ -1.46
CDH9-201ENST00000231021 RBM10P98175 930 aaKnown RBP5.9□□□□□ -1.46
CDH9-201ENST00000231021 MCM6Q14566 821 aa5.9□□□□□ -1.46
CDH9-201ENST00000231021 RIPOR2Q9Y4F9 1068 aa5.9□□□□□ -1.46
CDH9-201ENST00000231021 IVNS1ABPQ9Y6Y0 642 aa5.9□□□□□ -1.46
CDH9-201ENST00000231021 RB1CC1Q8TDY2 1594 aa5.9□□□□□ -1.47
CDH9-201ENST00000231021 KRI1Q8N9T8 703 aaKnown RBP5.89□□□□□ -1.47
CDH9-201ENST00000231021 PLCD4Q9BRC7 762 aa5.89□□□□□ -1.47
CDH9-201ENST00000231021 SSUH2Q9Y2M2 353 aa5.89□□□□□ -1.47
CDH9-201ENST00000231021 ANAPC15P60006 121 aa5.89□□□□□ -1.47
CDH9-201ENST00000231021 RAB11FIP3O75154 756 aa5.88□□□□□ -1.47
CDH9-201ENST00000231021 PROSER2Q86WR7 435 aaPredicted RBP5.88□□□□□ -1.47
CDH9-201ENST00000231021 FNBP4Q8N3X1 1017 aaPredicted RBP5.88□□□□□ -1.47
CDH9-201ENST00000231021 SPATA32Q96LK8 384 aa5.88□□□□□ -1.47
CDH9-201ENST00000231021 RBM27Q9P2N5 1060 aaKnown RBP5.88□□□□□ -1.47
CDH9-201ENST00000231021 MICAL1Q8TDZ2 1067 aa5.88□□□□□ -1.47
CDH9-201ENST00000231021 ABCC9O60706 1549 aa5.88□□□□□ -1.47
CDH9-201ENST00000231021 ANKRD62A6NC57 917 aa5.88□□□□□ -1.47
CDH9-201ENST00000231021 PDE6BP35913 854 aa5.88□□□□□ -1.47
CDH9-201ENST00000231021 MRRFQ96E11 262 aaKnown RBP5.88□□□□□ -1.47
CDH9-201ENST00000231021 RFX1P22670 979 aa5.87□□□□□ -1.47
CDH9-201ENST00000231021 OS9Q13438 667 aaPredicted RBP5.87□□□□□ -1.47
CDH9-201ENST00000231021 KLHL42Q9P2K6 505 aa5.87□□□□□ -1.47
CDH9-201ENST00000231021 PPME1Q9Y570 386 aa5.87□□□□□ -1.47
CDH9-201ENST00000231021 GPATCH3Q96I76 525 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms