RNA–Protein interactions for RNA: ENST00000211921.11

LST1-201, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-201ENST00000211921 ARID4BQ4LE39 1312 aaPredicted RBP18.36■□□□□ 0.53
LST1-201ENST00000211921 EFCAB2Q5VUJ9 269 aa18.36■□□□□ 0.53
LST1-201ENST00000211921 POGZQ7Z3K3 1410 aa18.36■□□□□ 0.53
LST1-201ENST00000211921 BCORL1Q5H9F3 1711 aa18.35■□□□□ 0.53
LST1-201ENST00000211921 CDC42BPBQ9Y5S2 1711 aa18.35■□□□□ 0.53
LST1-201ENST00000211921 SCAPERQ9BY12 1400 aa18.35■□□□□ 0.53
LST1-201ENST00000211921 ADAMTSL3P82987 1691 aa18.33■□□□□ 0.52
LST1-201ENST00000211921 MAGI2Q86UL8 1455 aa18.33■□□□□ 0.52
LST1-201ENST00000211921 CEP162Q5TB80 1403 aa18.32■□□□□ 0.52
LST1-201ENST00000211921 CDC42BPAQ5VT25 1732 aa18.32■□□□□ 0.52
LST1-201ENST00000211921 ZNF518AQ6AHZ1 1483 aa18.3■□□□□ 0.52
LST1-201ENST00000211921 MADDQ8WXG6 1647 aa18.3■□□□□ 0.52
LST1-201ENST00000211921 HECW2Q9P2P5 1572 aa18.28■□□□□ 0.52
LST1-201ENST00000211921 ITSN2Q9NZM3 1697 aa18.28■□□□□ 0.52
LST1-201ENST00000211921 YEATS2Q9ULM3 1422 aa18.27■□□□□ 0.52
LST1-201ENST00000211921 RIMS1Q86UR5 1692 aaKnown RBP18.27■□□□□ 0.52
LST1-201ENST00000211921 ABCC1P33527 1531 aa18.26■□□□□ 0.51
LST1-201ENST00000211921 KDM5CP41229 1560 aa18.25■□□□□ 0.51
LST1-201ENST00000211921 MYT1LQ9UL68 1186 aa18.25■□□□□ 0.51
LST1-201ENST00000211921 MTUS2Q5JR59 1369 aa18.25■□□□□ 0.51
LST1-201ENST00000211921 FER1L4A9Z1Z3 1794 aa18.25■□□□□ 0.51
LST1-201ENST00000211921 PTPRMP28827 1452 aa18.24■□□□□ 0.51
LST1-201ENST00000211921 SIGLEC1Q9BZZ2 1709 aa18.23■□□□□ 0.51
LST1-201ENST00000211921 EHBP1L1Q8N3D4 1523 aa18.23■□□□□ 0.51
LST1-201ENST00000211921 C9orf84Q5VXU9 1444 aa18.22■□□□□ 0.51
LST1-201ENST00000211921 ATP10AO60312 1499 aa18.2■□□□□ 0.5
LST1-201ENST00000211921 SAMD9LQ8IVG5 1584 aa18.19■□□□□ 0.5
LST1-201ENST00000211921 CCNB3Q8WWL7 1395 aa18.18■□□□□ 0.5
LST1-201ENST00000211921 DIP2CQ9Y2E4 1556 aa18.18■□□□□ 0.5
LST1-201ENST00000211921 ZNF777Q9ULD5 760 aaPredicted RBP18.18■□□□□ 0.5
LST1-201ENST00000211921 ABCA6Q8N139 1617 aa18.18■□□□□ 0.5
LST1-201ENST00000211921 SYCP2Q9BX26 1530 aa18.18■□□□□ 0.5
LST1-201ENST00000211921 AFAP1Q8N556 730 aa18.17■□□□□ 0.5
LST1-201ENST00000211921 GPATCH8Q9UKJ3 1502 aaKnown RBP18.17■□□□□ 0.5
LST1-201ENST00000211921 SUPT6HQ7KZ85 1726 aaKnown RBP18.16■□□□□ 0.5
LST1-201ENST00000211921 ARHGEF12Q9NZN5 1544 aa18.15■□□□□ 0.5
LST1-201ENST00000211921 MLECQ14165 292 aa18.15■□□□□ 0.5
LST1-201ENST00000211921 TRAPPC8Q9Y2L5 1435 aa18.15■□□□□ 0.5
LST1-201ENST00000211921 PLEKHH2Q8IVE3 1493 aa18.14■□□□□ 0.5
LST1-201ENST00000211921 MLH3Q9UHC1 1453 aa18.14■□□□□ 0.5
LST1-201ENST00000211921 TIAM1Q13009 1591 aa18.14■□□□□ 0.49
LST1-201ENST00000211921 REREQ9P2R6 1566 aa18.13■□□□□ 0.49
LST1-201ENST00000211921 KIDINS220Q9ULH0 1771 aa18.13■□□□□ 0.49
LST1-201ENST00000211921 LOC105371045A0A1W2PR82 267 aa18.13■□□□□ 0.49
LST1-201ENST00000211921 CFDP1Q9UEE9 299 aaPredicted RBP18.13■□□□□ 0.49
LST1-201ENST00000211921 VPS8Q8N3P4 1428 aa18.12■□□□□ 0.49
LST1-201ENST00000211921 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
LST1-201ENST00000211921 ATP7AQ04656 1500 aa18.08■□□□□ 0.48
LST1-201ENST00000211921 KIAA1107Q9UPP5 1409 aa18.07■□□□□ 0.48
LST1-201ENST00000211921 INO80Q9ULG1 1556 aaPredicted RBP18.07■□□□□ 0.48
LST1-201ENST00000211921 SPAG9O60271 1321 aaKnown RBP18.06■□□□□ 0.48
LST1-201ENST00000211921 NCOA2Q15596 1464 aa18.06■□□□□ 0.48
LST1-201ENST00000211921 AGLP35573 1532 aa18.05■□□□□ 0.48
LST1-201ENST00000211921 HNRNPMP52272 730 aaKnown RBP eCLIP18.05■□□□□ 0.48
LST1-201ENST00000211921 PREX1Q8TCU6 1659 aa18.04■□□□□ 0.48
LST1-201ENST00000211921 LMTK3Q96Q04 1460 aa18.04■□□□□ 0.48
LST1-201ENST00000211921 ADGBQ8N7X0 1667 aa18.03■□□□□ 0.48
LST1-201ENST00000211921 ESF1Q9H501 851 aaKnown RBP18.03■□□□□ 0.48
LST1-201ENST00000211921 LRRC9Q6ZRR7 1453 aa18.01■□□□□ 0.47
LST1-201ENST00000211921 CAMSAP2Q08AD1 1489 aa18■□□□□ 0.47
LST1-201ENST00000211921 C3P01024 1663 aa17.99■□□□□ 0.47
LST1-201ENST00000211921 MAP3K1Q13233 1512 aa17.99■□□□□ 0.47
LST1-201ENST00000211921 ZNF644Q9H582 1327 aaPredicted RBP17.98■□□□□ 0.47
LST1-201ENST00000211921 PLXNC1O60486 1568 aa17.97■□□□□ 0.47
LST1-201ENST00000211921 A2MP01023 1474 aa17.97■□□□□ 0.47
LST1-201ENST00000211921 MROH2AA6NES4 1674 aa17.96■□□□□ 0.47
LST1-201ENST00000211921 CCDC141Q6ZP82 1450 aa17.96■□□□□ 0.47
LST1-201ENST00000211921 APLP2Q06481 763 aa17.96■□□□□ 0.47
LST1-201ENST00000211921 CNTLNQ9NXG0 1405 aa17.96■□□□□ 0.47
LST1-201ENST00000211921 SETD1BQ9UPS6 1966 aaKnown RBP17.95■□□□□ 0.46
LST1-201ENST00000211921 MBD5Q9P267 1494 aa17.95■□□□□ 0.46
LST1-201ENST00000211921 CLTCQ00610 1675 aaKnown RBP17.93■□□□□ 0.46
LST1-201ENST00000211921 CEBPAP49715 358 aaPredicted RBP17.93■□□□□ 0.46
LST1-201ENST00000211921 ARHGEF5Q12774 1597 aa17.92■□□□□ 0.46
LST1-201ENST00000211921 RTEL1-TNFRSF6BF6WH68 1400 aa17.91■□□□□ 0.46
LST1-201ENST00000211921 UHRF1BP1Q6BDS2 1440 aa17.91■□□□□ 0.46
LST1-201ENST00000211921 HSPA2P54652 639 aa17.91■□□□□ 0.46
LST1-201ENST00000211921 MYOM3Q5VTT5 1437 aa17.89■□□□□ 0.45
LST1-201ENST00000211921 RSPH4AQ5TD94 716 aa17.88■□□□□ 0.45
LST1-201ENST00000211921 KANK4Q5T7N3 995 aaPredicted RBP17.87■□□□□ 0.45
LST1-201ENST00000211921 TSPY4P0CV99 314 aa17.85■□□□□ 0.45
LST1-201ENST00000211921 TSPY10P0CW01 314 aa17.85■□□□□ 0.45
LST1-201ENST00000211921 GGT6Q6P531 493 aa17.85■□□□□ 0.45
LST1-201ENST00000211921 MIA2Q96PC5 1412 aa17.85■□□□□ 0.45
LST1-201ENST00000211921 MAST1Q9Y2H9 1570 aa17.83■□□□□ 0.45
LST1-201ENST00000211921 NPATQ14207 1427 aa17.82■□□□□ 0.44
LST1-201ENST00000211921 DHX29Q7Z478 1369 aaKnown RBP17.82■□□□□ 0.44
LST1-201ENST00000211921 CROCC2H7BZ55 1655 aa17.82■□□□□ 0.44
LST1-201ENST00000211921 PTPN23Q9H3S7 1636 aa17.82■□□□□ 0.44
LST1-201ENST00000211921 MYO3AQ8NEV4 1616 aa17.81■□□□□ 0.44
LST1-201ENST00000211921 ZMYM3Q14202 1370 aa17.8■□□□□ 0.44
LST1-201ENST00000211921 FAM135AQ9P2D6 1515 aa17.8■□□□□ 0.44
LST1-201ENST00000211921 STRCQ7RTU9 1775 aa17.79■□□□□ 0.44
LST1-201ENST00000211921 KDM5DQ9BY66 1539 aa17.79■□□□□ 0.44
LST1-201ENST00000211921 KIF3BO15066 747 aa17.79■□□□□ 0.44
LST1-201ENST00000211921 ILDR1Q86SU0 546 aaPredicted RBP17.79■□□□□ 0.44
LST1-201ENST00000211921 PPP6R1Q9UPN7 881 aa17.79■□□□□ 0.44
LST1-201ENST00000211921 ZNF142P52746 1687 aaPredicted RBP17.78■□□□□ 0.44
LST1-201ENST00000211921 EIF2AK4Q9P2K8 1649 aaKnown RBP17.78■□□□□ 0.44
LST1-201ENST00000211921 RNF17Q9BXT8 1623 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms