RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ZNF280CQ8ND82 737 aa14.95□□□□□ -0.02
PHGDH-221ENST00000641573 SH3TC2Q8TF17 1288 aa14.95□□□□□ -0.02
PHGDH-221ENST00000641573 AMNQ9BXJ7 453 aa14.95□□□□□ -0.02
PHGDH-221ENST00000641573 RIC8AQ9NPQ8 531 aa14.95□□□□□ -0.02
PHGDH-221ENST00000641573 BIN2Q9UBW5 565 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-221ENST00000641573 PCDHA1Q9Y5I3 950 aa14.95□□□□□ -0.02
PHGDH-221ENST00000641573 OTOFQ9HC10 1997 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 WNT7AO00755 349 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 CUTAO60888 179 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 BMP15O95972 392 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 MRPL12P52815 198 aaKnown RBP14.94□□□□□ -0.02
PHGDH-221ENST00000641573 CAP1Q01518 475 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 NONOQ15233 471 aaKnown RBP eCLIP14.94□□□□□ -0.02
PHGDH-221ENST00000641573 JAKMIP3Q5VZ66 844 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 CCDC73Q6ZRK6 1079 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 MRPS27Q92552 414 aaKnown RBP14.94□□□□□ -0.02
PHGDH-221ENST00000641573 CUL5Q93034 780 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 KIFC2Q96AC6 838 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 OPTNQ96CV9 577 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 HTATIP2Q9BUP3 242 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 GOLPH3LQ9H4A5 285 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 ELP3Q9H9T3 547 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 EMILIN3Q9NT22 766 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 TMEM260Q9NX78 707 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 ZHX2Q9Y6X8 837 aa14.94□□□□□ -0.02
PHGDH-221ENST00000641573 MORC2Q9Y6X9 1032 aaPredicted RBP14.94□□□□□ -0.02
PHGDH-221ENST00000641573 RANBP2P49792 3224 aaKnown RBP14.93□□□□□ -0.02
PHGDH-221ENST00000641573 A0A0C4DFX4 3053 aa14.93□□□□□ -0.02
PHGDH-221ENST00000641573 CMA1P23946 247 aa14.93□□□□□ -0.02
PHGDH-221ENST00000641573 BACE1P56817 501 aa14.93□□□□□ -0.02
PHGDH-221ENST00000641573 ZNF445P59923 1031 aa14.93□□□□□ -0.02
PHGDH-221ENST00000641573 TRAF1Q13077 416 aa14.93□□□□□ -0.02
PHGDH-221ENST00000641573 INF2Q27J81 1249 aa14.93□□□□□ -0.02
PHGDH-221ENST00000641573 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-221ENST00000641573 KRI1Q8N9T8 703 aaKnown RBP14.93□□□□□ -0.02
PHGDH-221ENST00000641573 GLT8D2Q9H1C3 349 aa14.93□□□□□ -0.02
PHGDH-221ENST00000641573 RANBP17Q9H2T7 1088 aaKnown RBP14.93□□□□□ -0.02
PHGDH-221ENST00000641573 PSTPIP2Q9H939 334 aa14.93□□□□□ -0.02
PHGDH-221ENST00000641573 DDX19AQ9NUU7 478 aaKnown RBP14.93□□□□□ -0.02
PHGDH-221ENST00000641573 FBXO28Q9NVF7 368 aa14.93□□□□□ -0.02
PHGDH-221ENST00000641573 DACT1Q9NYF0 836 aa14.93□□□□□ -0.02
PHGDH-221ENST00000641573 FBXO2Q9UK22 296 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-221ENST00000641573 NR2E3Q9Y5X4 410 aa14.93□□□□□ -0.02
PHGDH-221ENST00000641573 SNCAIPQ9Y6H5 919 aa14.93□□□□□ -0.02
PHGDH-221ENST00000641573 CCL15-CCL14A0A0B4J2E2 113 aa14.92□□□□□ -0.02
PHGDH-221ENST00000641573 SYCE3A1L190 88 aa14.92□□□□□ -0.02
PHGDH-221ENST00000641573 NR1I2O75469 434 aa14.92□□□□□ -0.02
PHGDH-221ENST00000641573 LETM1O95202 739 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-221ENST00000641573 VCAM1P19320 739 aa14.92□□□□□ -0.02
PHGDH-221ENST00000641573 PTPREP23469 700 aa14.92□□□□□ -0.02
PHGDH-221ENST00000641573 GTF2A2P52657 109 aa14.92□□□□□ -0.02
PHGDH-221ENST00000641573 VGLL4Q14135 290 aa14.92□□□□□ -0.02
PHGDH-221ENST00000641573 CCL15Q16663 113 aa14.92□□□□□ -0.02
PHGDH-221ENST00000641573 UBE2SQ16763 222 aa14.92□□□□□ -0.02
PHGDH-221ENST00000641573 USH1GQ495M9 461 aa14.92□□□□□ -0.02
PHGDH-221ENST00000641573 CCDC174Q6PII3 467 aa14.92□□□□□ -0.02
PHGDH-221ENST00000641573 SAMD1Q6SPF0 538 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-221ENST00000641573 CLIC6Q96NY7 704 aa14.92□□□□□ -0.02
PHGDH-221ENST00000641573 SLF1Q9BQI6 1058 aa14.92□□□□□ -0.02
PHGDH-221ENST00000641573 NUP62CLQ9H1M0 184 aa14.92□□□□□ -0.02
PHGDH-221ENST00000641573 SRPRBQ9Y5M8 271 aaKnown RBP14.92□□□□□ -0.02
PHGDH-221ENST00000641573 A0A1B0GVL5 298 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 C19orf81C9J6K1 198 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 GNRH1P01148 92 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 MCM7P33993 719 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 CLK2P49760 499 aaKnown RBP14.91□□□□□ -0.02
PHGDH-221ENST00000641573 PRMT2P55345 433 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 ATP2C1P98194 919 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-221ENST00000641573 FAM160A1Q05DH4 1040 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 SHC4Q6S5L8 630 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 ENGASEQ8NFI3 743 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 BRI3BPQ8WY22 251 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 MS4A4AQ96JQ5 239 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 C12orf42Q96LP6 360 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 TANGO6Q9C0B7 1094 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 CLSTN2Q9H4D0 955 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 RPAP3Q9H6T3 665 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-221ENST00000641573 AFG3L2Q9Y4W6 797 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 CSADQ9Y600 493 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 MRVI1Q9Y6F6 885 aa14.91□□□□□ -0.02
PHGDH-221ENST00000641573 PFKFB1P16118 471 aa14.9□□□□□ -0.02
PHGDH-221ENST00000641573 TAL1P17542 331 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-221ENST00000641573 MNX1P50219 401 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-221ENST00000641573 NDUFA8P51970 172 aa14.9□□□□□ -0.02
PHGDH-221ENST00000641573 HMGCS2P54868 508 aa14.9□□□□□ -0.02
PHGDH-221ENST00000641573 PTGDRQ13258 359 aa14.9□□□□□ -0.02
PHGDH-221ENST00000641573 SNW1Q13573 536 aaKnown RBP14.9□□□□□ -0.02
PHGDH-221ENST00000641573 RESP18Q5W5W9 173 aa14.9□□□□□ -0.02
PHGDH-221ENST00000641573 NEK8Q86SG6 692 aa14.9□□□□□ -0.02
PHGDH-221ENST00000641573 FMR1NBQ8N0W7 255 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-221ENST00000641573 ZNF579Q8NAF0 562 aaKnown RBP14.9□□□□□ -0.02
PHGDH-221ENST00000641573 PRPF38AQ8NAV1 312 aaKnown RBP14.9□□□□□ -0.02
PHGDH-221ENST00000641573 TBCKQ8TEA7 893 aa14.9□□□□□ -0.02
PHGDH-221ENST00000641573 FERMT2Q96AC1 680 aa14.9□□□□□ -0.02
PHGDH-221ENST00000641573 FAM237AA0A1B0GTK4 181 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 USP17L15C9J2P7 530 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 USP17L13C9JLJ4 530 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 USP17L11C9JVI0 530 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 USP17L18D6R9N7 530 aa14.89□□□□□ -0.03
PHGDH-221ENST00000641573 USP17L22D6RA61 530 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms