RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 CDC25AP30304 524 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 METAP2P50579 478 aaKnown RBP eCLIP13.27□□□□□ -0.29
CAPN3-221ENST00000638141 ANTXR2P58335 489 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 MRPS35P82673 323 aaKnown RBP13.27□□□□□ -0.29
CAPN3-221ENST00000638141 SAFBQ15424 915 aaKnown RBP eCLIP13.27□□□□□ -0.29
CAPN3-221ENST00000638141 TCP11X2Q5H9J9 407 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 AKAP4Q5JQC9 854 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 C1QTNF12Q5T7M4 302 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 NFXL1Q6ZNB6 911 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 ZNF513Q8N8E2 541 aaPredicted RBP13.27□□□□□ -0.29
CAPN3-221ENST00000638141 ANKS4BQ8N8V4 417 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 RAPGEF5Q92565 580 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 IQCDQ96DY2 449 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 SUDS3Q9H7L9 328 aaPredicted RBP13.27□□□□□ -0.29
CAPN3-221ENST00000638141 CNOT10Q9H9A5 744 aaKnown RBP13.27□□□□□ -0.29
CAPN3-221ENST00000638141 SEC31BQ9NQW1 1179 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 ZNHIT6Q9NWK9 470 aaKnown RBP13.27□□□□□ -0.29
CAPN3-221ENST00000638141 CWC25Q9NXE8 425 aaPredicted RBP13.27□□□□□ -0.29
CAPN3-221ENST00000638141 TSKSQ9UJT2 592 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 TNS3Q68CZ2 1445 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 MYH10P35580 1976 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 NEURL1BA8MQ27 555 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 DIAPH2O60879 1101 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 WFS1O76024 890 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 ABL2P42684 1182 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 SLC7A5Q01650 507 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 GCKRQ14397 625 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 CHST3Q7LGC8 479 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 RETREG2Q8NC44 543 aa13.27□□□□□ -0.29
CAPN3-221ENST00000638141 ANGEL1Q9UNK9 670 aaKnown RBP13.27□□□□□ -0.29
CAPN3-221ENST00000638141 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.27□□□□□ -0.29
CAPN3-221ENST00000638141 ALS2Q96Q42 1657 aa13.26□□□□□ -0.29
CAPN3-221ENST00000638141 BMP15O95972 392 aa13.26□□□□□ -0.29
CAPN3-221ENST00000638141 PYGLP06737 847 aa13.26□□□□□ -0.29
CAPN3-221ENST00000638141 CCT6AP40227 531 aaKnown RBP13.26□□□□□ -0.29
CAPN3-221ENST00000638141 CTCFP49711 727 aaPredicted RBP13.26□□□□□ -0.29
CAPN3-221ENST00000638141 CABLES1Q8TDN4 633 aa13.26□□□□□ -0.29
CAPN3-221ENST00000638141 OSBPL1AQ9BXW6 950 aa13.26□□□□□ -0.29
CAPN3-221ENST00000638141 PLAAQ9Y263 795 aa13.26□□□□□ -0.29
CAPN3-221ENST00000638141 AFF2P51816 1311 aa13.26□□□□□ -0.29
CAPN3-221ENST00000638141 RCCD1A6NED2 376 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 F8W031 263 aaPredicted RBP13.25□□□□□ -0.29
CAPN3-221ENST00000638141 H0YGN5 161 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 IGKV5-2P06315 115 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 KIF5BP33176 963 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 CARSP49589 748 aaKnown RBP13.25□□□□□ -0.29
CAPN3-221ENST00000638141 DPYDQ12882 1025 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 CUL3Q13618 768 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 NBPF15Q8N660 670 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 CTNNAL1Q9UBT7 734 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 NFU1Q9UMS0 254 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 L3MBTL1Q9Y468 752 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 NFS1Q9Y697 457 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 LRRD1A4D1F6 860 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 LGALS16A8MUM7 142 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 USO1O60763 962 aaKnown RBP13.25□□□□□ -0.29
CAPN3-221ENST00000638141 ANXA1P04083 346 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 FAM153BP0C7A2 387 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 CSB-PGBD3P0DP91 1061 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 NQO1P15559 274 aaKnown RBP13.25□□□□□ -0.29
CAPN3-221ENST00000638141 IARSP41252 1262 aaKnown RBP13.25□□□□□ -0.29
CAPN3-221ENST00000638141 ZNF131P52739 623 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 STX17P56962 302 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 DYNC1I2Q13409 638 aaKnown RBP13.25□□□□□ -0.29
CAPN3-221ENST00000638141 FAM153CQ494X1 144 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 ANKRD20A2Q5SQ80 823 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 ANKRD20A1Q5TYW2 823 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 ANKRD20A3Q5VUR7 823 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 KLHL10Q6JEL2 608 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 CPLX4Q7Z7G2 160 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 CHMP6Q96FZ7 201 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 RBM41Q96IZ5 413 aaKnown RBP13.25□□□□□ -0.29
CAPN3-221ENST00000638141 TMEM87BQ96K49 555 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 GPHNQ9NQX3 736 aaPredicted RBP13.25□□□□□ -0.29
CAPN3-221ENST00000638141 FAM153AQ9UHL3 310 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 PCDHGA4Q9Y5G9 962 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 ADAMTS7Q9UKP4 1686 aa13.25□□□□□ -0.29
CAPN3-221ENST00000638141 GRID2IPA4D2P6 1211 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 KCNJ18B7U540 433 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 E7ENQ6 273 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 ZSCAN9O15535 394 aaPredicted RBP13.24□□□□□ -0.29
CAPN3-221ENST00000638141 SMIM24O75264 130 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 FLOT1O75955 427 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 CLTAP09496 248 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 FAM163BP0C2L3 166 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 KCNJ12Q14500 433 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 APBB1IPQ7Z5R6 666 aaPredicted RBP13.24□□□□□ -0.29
CAPN3-221ENST00000638141 PIGWQ7Z7B1 504 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 GRAMD1CQ8IYS0 662 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 MB21D1Q8N884 522 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 PLEKHG4BQ96PX9 1271 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 TTYH3Q9C0H2 523 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 SH2D4AQ9H788 454 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 PANK4Q9NVE7 773 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 WDR35Q9P2L0 1181 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 PHRF1Q9P1Y6 1649 aaKnown RBP13.24□□□□□ -0.29
CAPN3-221ENST00000638141 GLI1P08151 1106 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 ALDH3A1P30838 453 aa13.24□□□□□ -0.29
CAPN3-221ENST00000638141 HPDP32754 393 aaPredicted RBP13.24□□□□□ -0.29
CAPN3-221ENST00000638141 NLRP6P59044 892 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms