RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 USP17L24Q0WX57 530 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 PTGDRQ13258 359 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 UBE2SQ16763 222 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 CCDC174Q6PII3 467 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 MOXD1Q6UVY6 613 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 PRRT2Q7Z6L0 340 aaPredicted RBP17.46■□□□□ 0.39
CLN6-219ENST00000637329 ENGASEQ8NFI3 743 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 MAF1Q9H063 256 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 NUP62CLQ9H1M0 184 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 CLSTN2Q9H4D0 955 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 ELP3Q9H9T3 547 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 TMEM260Q9NX78 707 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 CCPG1Q9ULG6 757 aa17.46■□□□□ 0.39
CLN6-219ENST00000637329 CTDP1Q9Y5B0 961 aaPredicted RBP17.46■□□□□ 0.39
CLN6-219ENST00000637329 ZNF536O15090 1300 aa17.46■□□□□ 0.38
CLN6-219ENST00000637329 NEMFO60524 1076 aa17.45■□□□□ 0.38
CLN6-219ENST00000637329 KINO60870 393 aaKnown RBP17.45■□□□□ 0.38
CLN6-219ENST00000637329 NR1I2O75469 434 aa17.45■□□□□ 0.38
CLN6-219ENST00000637329 ITGBL1O95965 494 aaPredicted RBP17.45■□□□□ 0.38
CLN6-219ENST00000637329 MCM7P33993 719 aa17.45■□□□□ 0.38
CLN6-219ENST00000637329 DGKZQ13574 1117 aa17.45■□□□□ 0.38
CLN6-219ENST00000637329 ZNF174Q15697 407 aa17.45■□□□□ 0.38
CLN6-219ENST00000637329 MAP1SQ66K74 1059 aaPredicted RBP17.45■□□□□ 0.38
CLN6-219ENST00000637329 PPP4R3AQ6IN85 833 aa17.45■□□□□ 0.38
CLN6-219ENST00000637329 CATSPERGQ6ZRH7 1159 aa17.45■□□□□ 0.38
CLN6-219ENST00000637329 PAXIP1Q6ZW49 1069 aaPredicted RBP17.45■□□□□ 0.38
CLN6-219ENST00000637329 FMR1NBQ8N0W7 255 aaPredicted RBP17.45■□□□□ 0.38
CLN6-219ENST00000637329 ANO3Q9BYT9 981 aa17.45■□□□□ 0.38
CLN6-219ENST00000637329 EHMT1Q9H9B1 1298 aa17.45■□□□□ 0.38
CLN6-219ENST00000637329 MAP3K20Q9NYL2 800 aaKnown RBP17.45■□□□□ 0.38
CLN6-219ENST00000637329 ADAMTS5Q9UNA0 930 aa17.45■□□□□ 0.38
CLN6-219ENST00000637329 HPSEQ9Y251 543 aa17.45■□□□□ 0.38
CLN6-219ENST00000637329 SPDYE3A6NKU9 549 aa17.44■□□□□ 0.38
CLN6-219ENST00000637329 VWA5AO00534 786 aa17.44■□□□□ 0.38
CLN6-219ENST00000637329 ATP2A1O14983 1001 aa17.44■□□□□ 0.38
CLN6-219ENST00000637329 CTAGE5O15320 804 aa17.44■□□□□ 0.38
CLN6-219ENST00000637329 PFKFB1P16118 471 aa17.44■□□□□ 0.38
CLN6-219ENST00000637329 DSG3P32926 999 aa17.44■□□□□ 0.38
CLN6-219ENST00000637329 SNW1Q13573 536 aaKnown RBP17.44■□□□□ 0.38
CLN6-219ENST00000637329 COG2Q14746 738 aa17.44■□□□□ 0.38
CLN6-219ENST00000637329 LETM2Q2VYF4 491 aa17.44■□□□□ 0.38
CLN6-219ENST00000637329 SHC4Q6S5L8 630 aa17.44■□□□□ 0.38
CLN6-219ENST00000637329 MCF2L2Q86YR7 1114 aa17.44■□□□□ 0.38
CLN6-219ENST00000637329 OTUD5Q96G74 571 aa17.44■□□□□ 0.38
CLN6-219ENST00000637329 CLMNQ96JQ2 1002 aa17.44■□□□□ 0.38
CLN6-219ENST00000637329 FAM13BQ9NYF5 915 aa17.44■□□□□ 0.38
CLN6-219ENST00000637329 CCNT1O60563 726 aaKnown RBP17.43■□□□□ 0.38
CLN6-219ENST00000637329 HOXA7P31268 230 aaPredicted RBP17.43■□□□□ 0.38
CLN6-219ENST00000637329 LONP1P36776 959 aaKnown RBP17.43■□□□□ 0.38
CLN6-219ENST00000637329 SREBF1P36956 1147 aa17.43■□□□□ 0.38
CLN6-219ENST00000637329 USP11P51784 963 aa17.43■□□□□ 0.38
CLN6-219ENST00000637329 USP17L6PQ6QN14 398 aa17.43■□□□□ 0.38
CLN6-219ENST00000637329 RBM43Q6ZSC3 357 aaKnown RBP17.43■□□□□ 0.38
CLN6-219ENST00000637329 C4orf32Q8N8J7 132 aa17.43■□□□□ 0.38
CLN6-219ENST00000637329 CRYGNQ8WXF5 182 aa17.43■□□□□ 0.38
CLN6-219ENST00000637329 TIGD1Q96MW7 591 aa17.43■□□□□ 0.38
CLN6-219ENST00000637329 HOXC10Q9NYD6 342 aa17.43■□□□□ 0.38
CLN6-219ENST00000637329 GCOM1H8Y6P7 765 aaPredicted RBP17.42■□□□□ 0.38
CLN6-219ENST00000637329 IRF6O14896 467 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 OR52Z1P0C646 297 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 POLR2MP0CAP2 368 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 HSD17B4P51659 736 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 NDUFA8P51970 172 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 PABPC4Q13310 644 aaKnown RBP eCLIP17.42■□□□□ 0.382e-12■□□□□ 10.6
CLN6-219ENST00000637329 TKFCQ3LXA3 575 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 TPRNQ4KMQ1 711 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 LRSAM1Q6UWE0 723 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 LBX2Q6XYB7 198 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 MB21D1Q8N884 522 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 REPS2Q8NFH8 660 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 OPTNQ96CV9 577 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 ATG4CQ96DT6 458 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 CLIC6Q96NY7 704 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 PYM1Q9BRP8 204 aaKnown RBP17.42■□□□□ 0.38
CLN6-219ENST00000637329 RABGAP1Q9Y3P9 1069 aa17.42■□□□□ 0.38
CLN6-219ENST00000637329 CYP3A7-CYP3A51PA0A087WV96 503 aa17.41■□□□□ 0.38
CLN6-219ENST00000637329 A0A1B0GVL5 298 aa17.41■□□□□ 0.38
CLN6-219ENST00000637329 SYCE3A1L190 88 aa17.41■□□□□ 0.38
CLN6-219ENST00000637329 SPDYE16A6NNV3 312 aaPredicted RBP17.41■□□□□ 0.38
CLN6-219ENST00000637329 TRAF5O00463 557 aa17.41■□□□□ 0.38
CLN6-219ENST00000637329 CYP3A7P24462 503 aa17.41■□□□□ 0.38
CLN6-219ENST00000637329 SAMD1Q6SPF0 538 aaPredicted RBP17.41■□□□□ 0.38
CLN6-219ENST00000637329 MOB2Q70IA6 237 aa17.41■□□□□ 0.38
CLN6-219ENST00000637329 FASTKD5Q7L8L6 764 aaKnown RBP17.41■□□□□ 0.38
CLN6-219ENST00000637329 CNKSR2Q8WXI2 1034 aa17.41■□□□□ 0.38
CLN6-219ENST00000637329 AK8Q96MA6 479 aa17.41■□□□□ 0.38
CLN6-219ENST00000637329 AGBL1Q96MI9 1066 aa17.41■□□□□ 0.38
CLN6-219ENST00000637329 MBOAT7Q96N66 472 aa17.41■□□□□ 0.38
CLN6-219ENST00000637329 CSRNP2Q9H175 543 aa17.41■□□□□ 0.38
CLN6-219ENST00000637329 TNMDQ9H2S6 317 aa17.41■□□□□ 0.38
CLN6-219ENST00000637329 GBA2Q9HCG7 927 aaPredicted RBP17.41■□□□□ 0.38
CLN6-219ENST00000637329 AGTPBP1Q9UPW5 1226 aa17.41■□□□□ 0.38
CLN6-219ENST00000637329 COL11A1P12107 1806 aaPredicted RBP17.4■□□□□ 0.38
CLN6-219ENST00000637329 VWA3AA6NCI4 1184 aa17.4■□□□□ 0.38
CLN6-219ENST00000637329 CA12O43570 354 aa17.4■□□□□ 0.38
CLN6-219ENST00000637329 SYKP43405 635 aa17.4■□□□□ 0.38
CLN6-219ENST00000637329 ARHGAP4P98171 946 aa17.4■□□□□ 0.38
CLN6-219ENST00000637329 SNAPC2Q13487 334 aa17.4■□□□□ 0.38
CLN6-219ENST00000637329 DTHD1Q6ZMT9 781 aa17.4■□□□□ 0.38
CLN6-219ENST00000637329 ELOA2Q8IYF1 753 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms