RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 RCSD1Q6JBY9 416 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CRTC3Q6UUV7 619 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 LIPIQ6XZB0 460 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 PPFIBP1Q86W92 1011 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 NAT16Q8N8M0 369 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 NLGN2Q8NFZ4 835 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 DDX1Q92499 740 aaKnown RBP4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 RCC1LQ96I51 464 aaKnown RBP4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 CDADC1Q9BWV3 514 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 SLC12A9Q9BXP2 914 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 TNFRSF12AQ9NP84 129 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 EFR3BQ9Y2G0 817 aa4.84□□□□□ -1.63
NPHP3-ACAD11-202ENST00000632629 FGF10O15520 208 aaPredicted RBP4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 TBC1D8O95759 1140 aa4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 TACR2P21452 398 aa4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CNR2P34972 360 aa4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 ACVRL1P37023 503 aa4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 ZNF445P59923 1031 aa4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 SLC7A5Q01650 507 aa4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CBX2Q14781 532 aaPredicted RBP4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 KIR3DS1Q14943 382 aa4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 AXDND1Q5T1B0 1012 aaPredicted RBP4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 Q8N1X5 172 aa4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 C8orf49Q96NF6 230 aa4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 HAUS7Q99871 368 aa4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 KLHL25Q9H0H3 589 aa4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CCSER2Q9H7U1 834 aa4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CCDC9Q9Y3X0 531 aaKnown RBP4.83□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 IRS2Q9Y4H2 1338 aa4.82□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 NUDT19A8MXV4 375 aa4.82□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 PPM1BO75688 479 aa4.82□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CYP4F8P98187 520 aa4.82□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 TDRD10Q5VZ19 366 aaKnown RBP4.82□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 EEF1DP3Q658K8 133 aa4.82□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 DCAF15Q66K64 600 aa4.82□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 HEATR6Q6AI08 1181 aaKnown RBP4.82□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 POMZP3Q6PJE2 187 aa4.82□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 FIBCD1Q8N539 461 aa4.82□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 SHDQ96IW2 340 aa4.82□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 AP5S1Q9NUS5 200 aa4.82□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 SUSD2Q9UGT4 822 aa4.82□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 A0A1W2PQH9 124 aa4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 H0Y8X5 98 aa4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CBFA2T2O43439 604 aa4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 PFKLP17858 780 aa4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 MAPKAPK2P49137 400 aa4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 GNL2Q13823 731 aaKnown RBP4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 NCAPHQ15003 741 aa4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 ZYXQ15942 572 aaKnown RBP4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 GNPTABQ3T906 1256 aa4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 TNNI3KQ59H18 835 aa4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 VPS37DQ86XT2 251 aa4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 NUP43Q8NFH3 380 aa4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 FNIP1Q8TF40 1166 aa4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 KIAA1522Q9P206 1035 aaPredicted RBP4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 INPP5FQ9Y2H2 1132 aa4.81□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 LTBP3Q9NS15 1303 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 A0A1W2PQ27 194 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 A0A1W2PQ64 194 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 A0A1W2PQC6 194 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 A0A1W2PQD8 194 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 MEIS1O00470 390 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 NOBOXO60393 691 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CYBBP04839 570 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 GSTM1P09488 218 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 MSL3P1P0C860 447 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 PRKCAP17252 672 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 FBLN1P23142 703 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 L1CAMP32004 1257 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 NASPP49321 788 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 ZPBP2Q6X784 338 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CABP7Q86V35 215 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 JAMLQ86YT9 394 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 ARHGEF39Q8N4T4 335 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 TTC9BQ8N6N2 239 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 ZNF526Q8TF50 670 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CPLX3Q8WVH0 158 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 LOXL4Q96JB6 756 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 PTCHD1Q96NR3 888 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 SAMD11Q96NU1 681 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 JMJD8Q96S16 334 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 LNPKQ9C0E8 428 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CAPN10Q9HC96 672 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 PDLIM7Q9NR12 457 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 ZNF451Q9Y4E5 1061 aa4.8□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 ANKRD34BA5PLL1 514 aa4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 AURKAO14965 403 aa4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 PLA2G1BP04054 148 aaKnown RBP4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CEBPAP49715 358 aaPredicted RBP4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 AMPD2Q01433 879 aa4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 TRIM26Q12899 539 aaPredicted RBP4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 TARBP2Q15633 366 aaKnown RBP4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 ZC3H14Q6PJT7 736 aaKnown RBP4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 PAQR3Q6TCH7 311 aa4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 RPTNQ6XPR3 784 aa4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 CCDC81Q6ZN84 652 aa4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 RUFY4Q6ZNE9 571 aa4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 SPRED1Q7Z699 444 aa4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 SAPCD2Q86UD0 394 aa4.79□□□□□ -1.64
NPHP3-ACAD11-202ENST00000632629 TMEM52Q8NDY8 209 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms