RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 NPFFR2Q9Y5X5 522 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 KIF3BO15066 747 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 SOD2P04179 222 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 ATP2A2P16615 1042 aaKnown RBP5.05□□□□□ -1.6
LRRC39-204ENST00000620882 ZSCAN20P17040 1043 aaPredicted RBP5.05□□□□□ -1.6
LRRC39-204ENST00000620882 IL2P60568 153 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 ODF1Q14990 250 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 INAVAQ3KP66 663 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 FAM102BQ5T8I3 360 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 ANKRD34AQ69YU3 496 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 FSTL4Q6MZW2 842 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 CLRN3Q8NCR9 226 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 OR2W6PQ8NHA6 318 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 DCAF4Q8WV16 495 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 EVI5LQ96CN4 794 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 MPHOSPH6Q99547 160 aaKnown RBP5.05□□□□□ -1.6
LRRC39-204ENST00000620882 DUSP23Q9BVJ7 150 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 CHST7Q9NS84 486 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 GEMIN8Q9NWZ8 242 aaKnown RBP5.05□□□□□ -1.6
LRRC39-204ENST00000620882 CLEC1BQ9P126 229 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 LUC7L2Q9Y383 392 aaKnown RBP5.05□□□□□ -1.6
LRRC39-204ENST00000620882 U3KQE9 123 aa5.05□□□□□ -1.6
LRRC39-204ENST00000620882 PLS3P13797 630 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 GLB1P16278 677 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 SCNN1BP51168 640 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 RAC1P63000 192 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 NMIQ13287 307 aaPredicted RBP5.04□□□□□ -1.6
LRRC39-204ENST00000620882 MLC1Q15049 377 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 PCBP2Q15366 365 aaKnown RBP eCLIP5.04□□□□□ -1.6
LRRC39-204ENST00000620882 INF2Q27J81 1249 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 CCSAPQ6IQ19 270 aaPredicted RBP5.04□□□□□ -1.6
LRRC39-204ENST00000620882 SLC4A10Q6U841 1118 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 CCAR1Q8IX12 1150 aaKnown RBP5.04□□□□□ -1.6
LRRC39-204ENST00000620882 TCEAL8Q8IYN2 117 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 MAGEB6Q8N7X4 407 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 ORAI3Q9BRQ5 295 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 HDAC8Q9BY41 377 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 TPX2Q9ULW0 747 aaKnown RBP5.04□□□□□ -1.6
LRRC39-204ENST00000620882 APOBEC2Q9Y235 224 aaKnown RBP5.04□□□□□ -1.6
LRRC39-204ENST00000620882 LCHNA4D1U4 455 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 AQP7O14520 342 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 ZEB2O60315 1214 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 FBXO21O94952 628 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 CBX7O95931 251 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 CPP00450 1065 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 MYBL2P10244 700 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 ELNP15502 786 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 ETV3P41162 512 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 TMEM177Q53S58 311 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 UBE2R2Q712K3 238 aaPredicted RBP5.04□□□□□ -1.6
LRRC39-204ENST00000620882 ZC3H7AQ8IWR0 971 aaKnown RBP5.04□□□□□ -1.6
LRRC39-204ENST00000620882 SHISA5Q8N114 240 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 CISD2Q8N5K1 135 aaKnown RBP5.04□□□□□ -1.6
LRRC39-204ENST00000620882 RELTQ969Z4 430 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 ST14Q9Y5Y6 855 aa5.04□□□□□ -1.6
LRRC39-204ENST00000620882 C2orf71A6NGG8 1288 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 VSTM5A8MXK1 200 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 AURKAO14965 403 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 ITIH2P19823 946 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 FLT3P36888 993 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 GRIK1P39086 918 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 MECP2P51608 486 aaKnown RBP5.03□□□□□ -1.6
LRRC39-204ENST00000620882 ATP13A4Q4VNC1 1196 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 NXNQ6DKJ4 435 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 IQSEC1Q6DN90 963 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 FAM214BQ7L5A3 538 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 HDGFL2Q7Z4V5 671 aaPredicted RBP5.03□□□□□ -1.6
LRRC39-204ENST00000620882 PASD1Q8IV76 773 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 RCBTB1Q8NDN9 531 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 EZH1Q92800 747 aaPredicted RBP5.03□□□□□ -1.6
LRRC39-204ENST00000620882 CCDC140Q96MF4 163 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 HEXIM2Q96MH2 286 aaKnown RBP5.03□□□□□ -1.6
LRRC39-204ENST00000620882 ANLNQ9NQW6 1124 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 ZBTB21Q9ULJ3 1066 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 BACE2Q9Y5Z0 518 aa5.03□□□□□ -1.6
LRRC39-204ENST00000620882 GMPRP36959 345 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 USP11P51784 963 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 TNK2Q07912 1038 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 ZNF385CQ66K41 422 aaPredicted RBP5.02□□□□□ -1.61
LRRC39-204ENST00000620882 LBX2Q6XYB7 198 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 Q6ZS46 218 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 SMC5Q8IY18 1101 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 ARMC10Q8N2F6 343 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 TMEM130Q8N3G9 435 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 FAM46AQ96IP4 442 aaKnown RBP5.02□□□□□ -1.61
LRRC39-204ENST00000620882 SLC12A9Q9BXP2 914 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 ENAMQ9NRM1 1142 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 C14orf119Q9NWQ9 140 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 CBLCQ9ULV8 474 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 CCDC66A2RUB6 948 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 KCNK3O14649 394 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 TGM5O43548 720 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 PCDHGA12O60330 932 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 H2AFYO75367 372 aaKnown RBP5.02□□□□□ -1.61
LRRC39-204ENST00000620882 KRT18P05783 430 aaKnown RBP5.02□□□□□ -1.61
LRRC39-204ENST00000620882 GPR85P60893 370 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 KSR2Q6VAB6 950 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.02□□□□□ -1.61
LRRC39-204ENST00000620882 OVCH1Q7RTY7 1134 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 DDX53Q86TM3 631 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms