RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.13■■□□□ 1.13
FGFR1-241ENST00000619564 H2AFZP0C0S5 128 aa22.13■■□□□ 1.13
FGFR1-241ENST00000619564 SCRN1Q12765 414 aa22.13■■□□□ 1.13
FGFR1-241ENST00000619564 H2AFVQ71UI9 128 aa22.13■■□□□ 1.13
FGFR1-241ENST00000619564 NME8Q8N427 588 aa22.13■■□□□ 1.13
FGFR1-241ENST00000619564 MAP4K1Q92918 833 aa22.13■■□□□ 1.13
FGFR1-241ENST00000619564 ARHGEF2Q92974 986 aaKnown RBP22.13■■□□□ 1.13
FGFR1-241ENST00000619564 CDHR1Q96JP9 859 aa22.13■■□□□ 1.13
FGFR1-241ENST00000619564 VCX3BQ9H321 246 aa22.13■■□□□ 1.13
FGFR1-241ENST00000619564 FOXP1Q9H334 677 aaPredicted RBP22.13■■□□□ 1.13
FGFR1-241ENST00000619564 GAP43P17677 238 aa22.12■■□□□ 1.13
FGFR1-241ENST00000619564 MFAP3P55082 362 aa22.12■■□□□ 1.13
FGFR1-241ENST00000619564 WHAMMP3Q1A5X7 153 aa22.12■■□□□ 1.13
FGFR1-241ENST00000619564 DISC1Q9NRI5 854 aa22.12■■□□□ 1.13
FGFR1-241ENST00000619564 ATG3Q9NT62 314 aa22.12■■□□□ 1.13
FGFR1-241ENST00000619564 GCFC2P16383 781 aaKnown RBP22.12■■□□□ 1.13
FGFR1-241ENST00000619564 EXOC3L4Q17RC7 722 aa22.12■■□□□ 1.13
FGFR1-241ENST00000619564 FBXO18Q8NFZ0 1043 aa22.12■■□□□ 1.13
FGFR1-241ENST00000619564 LARP4BQ92615 738 aaKnown RBP22.12■■□□□ 1.13
FGFR1-241ENST00000619564 ANKRD36BP1Q96IX9 119 aa22.12■■□□□ 1.13
FGFR1-241ENST00000619564 FMNL1O95466 1100 aaPredicted RBP22.12■■□□□ 1.13
FGFR1-241ENST00000619564 CCND2P30279 289 aa22.12■■□□□ 1.13
FGFR1-241ENST00000619564 RBM6P78332 1123 aaKnown RBP22.12■■□□□ 1.13
FGFR1-241ENST00000619564 ANKRD20A3Q5VUR7 823 aa22.12■■□□□ 1.13
FGFR1-241ENST00000619564 PTPREP23469 700 aa22.12■■□□□ 1.13
FGFR1-241ENST00000619564 RSRC1Q96IZ7 334 aaKnown RBP22.12■■□□□ 1.13
FGFR1-241ENST00000619564 STAP2Q9UGK3 403 aa22.12■■□□□ 1.13
FGFR1-241ENST00000619564 AK8Q96MA6 479 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 NT5C1BQ96P26 610 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 UGGT1Q9NYU2 1555 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 ATP7BP35670 1465 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 HGSO14964 777 aaPredicted RBP22.11■■□□□ 1.13
FGFR1-241ENST00000619564 ADD2P35612 726 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 GTF2A1P52655 376 aaPredicted RBP22.11■■□□□ 1.13
FGFR1-241ENST00000619564 CLIC4Q9Y696 253 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 RGS16O15492 202 aaPredicted RBP22.11■■□□□ 1.13
FGFR1-241ENST00000619564 RAD17O75943 681 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 RINT1Q6NUQ1 792 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 LRFN2Q9ULH4 789 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 A6NJR5 290 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 BUB1O43683 1085 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 STAT2P52630 851 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 FAM182BQ5T319 152 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 NACC1Q96RE7 527 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 LSG1Q9H089 658 aaKnown RBP22.11■■□□□ 1.13
FGFR1-241ENST00000619564 RGS12O14924 1447 aa22.11■■□□□ 1.13
FGFR1-241ENST00000619564 M0R2C6 588 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 RPS6KA2Q15349 733 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 DALRD3Q5D0E6 543 aaKnown RBP22.1■■□□□ 1.13
FGFR1-241ENST00000619564 APOA5Q6Q788 366 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 NLRP10Q86W26 655 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 RILPQ96NA2 401 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 NUF2Q9BZD4 464 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 CCDC68Q9H2F9 335 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 INO80B-WBP1J3KQ70 363 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 MAP7D3Q8IWC1 876 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 INO80BQ9C086 356 aaPredicted RBP22.1■■□□□ 1.13
FGFR1-241ENST00000619564 TLR7Q9NYK1 1049 aaKnown RBP22.1■■□□□ 1.13
FGFR1-241ENST00000619564 TMEM63CQ9P1W3 806 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 GBP1P32455 592 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 METTL23Q86XA0 190 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 PPP4R1Q8TF05 950 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 ANKARQ7Z5J8 1434 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 BFSP1Q12934 665 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 C17orf53Q8N3J3 647 aaPredicted RBP22.1■■□□□ 1.13
FGFR1-241ENST00000619564 CABS1Q96KC9 395 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 PI4KBQ9UBF8 816 aa22.1■■□□□ 1.13
FGFR1-241ENST00000619564 SYNJ2BP-COX16A0A087WUM0 186 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 STX2P32856 288 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 NDUFA8P51970 172 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 KMT5AQ9NQR1 393 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 COX16Q9P0S2 106 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 NPR1P16066 1061 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 IREB2P48200 963 aaKnown RBP22.09■■□□□ 1.13
FGFR1-241ENST00000619564 PLEKHF1Q96S99 279 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 PLEKHA4Q9H4M7 779 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 CTNNA1P35221 906 aaKnown RBP22.09■■□□□ 1.13
FGFR1-241ENST00000619564 UNC5CLQ8IV45 518 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 ACCSQ96QU6 501 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 VCXQ9H320 206 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 NOC2LQ9Y3T9 749 aaKnown RBP22.09■■□□□ 1.13
FGFR1-241ENST00000619564 PCDHB4Q9Y5E5 795 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 TYW5A2RUC4 315 aaKnown RBP22.09■■□□□ 1.13
FGFR1-241ENST00000619564 SLC16A2P36021 539 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 SYDE2Q5VT97 1194 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 TYW1Q9NV66 732 aaKnown RBP22.09■■□□□ 1.13
FGFR1-241ENST00000619564 FANCLQ9NW38 375 aa22.09■■□□□ 1.13
FGFR1-241ENST00000619564 RTKN2Q8IZC4 609 aa22.08■■□□□ 1.13
FGFR1-241ENST00000619564 ANKRD42Q8N9B4 389 aa22.08■■□□□ 1.13
FGFR1-241ENST00000619564 GOLGA8CPA6NN73 597 aa22.08■■□□□ 1.13
FGFR1-241ENST00000619564 RNF40O75150 1001 aa22.08■■□□□ 1.13
FGFR1-241ENST00000619564 TROVE2P10155 538 aaKnown RBP eCLIP22.08■■□□□ 1.13
FGFR1-241ENST00000619564 HAUS4Q9H6D7 363 aa22.08■■□□□ 1.13
FGFR1-241ENST00000619564 PRKAG2Q9UGJ0 569 aa22.08■■□□□ 1.13
FGFR1-241ENST00000619564 USP6P35125 1406 aa22.08■■□□□ 1.13
FGFR1-241ENST00000619564 ABCD1P33897 745 aa22.08■■□□□ 1.13
FGFR1-241ENST00000619564 CNOT6LQ96LI5 555 aaKnown RBP22.08■■□□□ 1.13
FGFR1-241ENST00000619564 ERBB3P21860 1342 aa22.08■■□□□ 1.12
FGFR1-241ENST00000619564 PSMC2P35998 433 aaKnown RBP22.08■■□□□ 1.12
FGFR1-241ENST00000619564 VPS41P49754 854 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms