RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 MORC4Q8TE76 937 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 CLEC4DQ8WXI8 215 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 TTC14Q96N46 770 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 ZKSCAN3Q9BRR0 538 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 VTA1Q9NP79 307 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 EYSQ5T1H1 3165 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 PRUNE2Q8WUY3 3088 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 TTC28Q96AY4 2481 aa13.13□□□□□ -0.31
TARDBP-221ENST00000619555 PTPDC1A2A3K4 754 aa13.12□□□□□ -0.31
TARDBP-221ENST00000619555 CABYRO75952 493 aa13.12□□□□□ -0.31
TARDBP-221ENST00000619555 CENPBP07199 599 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-221ENST00000619555 CALML3P27482 149 aa13.12□□□□□ -0.31
TARDBP-221ENST00000619555 ALDH5A1P51649 535 aaPredicted RBP13.12□□□□□ -0.31
TARDBP-221ENST00000619555 PSMC6P62333 389 aa13.12□□□□□ -0.31
TARDBP-221ENST00000619555 ITGA7Q13683 1181 aa13.12□□□□□ -0.31
TARDBP-221ENST00000619555 SLC30A10Q6XR72 485 aa13.12□□□□□ -0.31
TARDBP-221ENST00000619555 ADD3Q9UEY8 706 aaKnown RBP13.12□□□□□ -0.31
TARDBP-221ENST00000619555 Q9Y3F1 56 aa13.12□□□□□ -0.31
TARDBP-221ENST00000619555 NEDD4P46934 1319 aa13.12□□□□□ -0.31
TARDBP-221ENST00000619555 GRXCR1A8MXD5 290 aa13.11□□□□□ -0.31
TARDBP-221ENST00000619555 ZEB2O60315 1214 aa13.11□□□□□ -0.31
TARDBP-221ENST00000619555 GOLGA8HP0CJ92 632 aa13.11□□□□□ -0.31
TARDBP-221ENST00000619555 SNHG28P0DPA3 235 aa13.11□□□□□ -0.31
TARDBP-221ENST00000619555 PCP11498 1178 aaKnown RBP13.11□□□□□ -0.31
TARDBP-221ENST00000619555 PDE4AP27815 886 aa13.11□□□□□ -0.31
TARDBP-221ENST00000619555 CWC27Q6UX04 472 aaKnown RBP13.11□□□□□ -0.31
TARDBP-221ENST00000619555 RNF207Q6ZRF8 634 aa13.11□□□□□ -0.31
TARDBP-221ENST00000619555 ZNF365Q70YC5 407 aa13.11□□□□□ -0.31
TARDBP-221ENST00000619555 TMEM199Q8N511 208 aa13.11□□□□□ -0.31
TARDBP-221ENST00000619555 MAFAQ8NHW3 353 aaPredicted RBP13.11□□□□□ -0.31
TARDBP-221ENST00000619555 WDR11Q9BZH6 1224 aa13.11□□□□□ -0.31
TARDBP-221ENST00000619555 TRPV6Q9H1D0 765 aa13.11□□□□□ -0.31
TARDBP-221ENST00000619555 CPVLQ9H3G5 476 aa13.11□□□□□ -0.31
TARDBP-221ENST00000619555 OSBPL3Q9H4L5 887 aa13.11□□□□□ -0.31
TARDBP-221ENST00000619555 RNF41Q9H4P4 317 aaPredicted RBP13.11□□□□□ -0.31
TARDBP-221ENST00000619555 VCANP13611 3396 aa13.11□□□□□ -0.31
TARDBP-221ENST00000619555 UMODL1Q5DID0 1318 aa13.11□□□□□ -0.31
TARDBP-221ENST00000619555 ZNF213O14771 459 aa13.1□□□□□ -0.31
TARDBP-221ENST00000619555 FOSL2P15408 326 aa13.1□□□□□ -0.31
TARDBP-221ENST00000619555 DNAJB2P25686 324 aa13.1□□□□□ -0.31
TARDBP-221ENST00000619555 MFAP1P55081 439 aaKnown RBP13.1□□□□□ -0.31
TARDBP-221ENST00000619555 RPS6P62753 249 aaKnown RBP13.1□□□□□ -0.31
TARDBP-221ENST00000619555 GRIN2CQ14957 1233 aa13.1□□□□□ -0.31
TARDBP-221ENST00000619555 DUSP28Q4G0W2 176 aa13.1□□□□□ -0.31
TARDBP-221ENST00000619555 RASIP1Q5U651 963 aa13.1□□□□□ -0.31
TARDBP-221ENST00000619555 ESR2Q92731 530 aa13.1□□□□□ -0.31
TARDBP-221ENST00000619555 COL25A1Q9BXS0 654 aaPredicted RBP13.1□□□□□ -0.31
TARDBP-221ENST00000619555 UBA5Q9GZZ9 404 aa13.1□□□□□ -0.31
TARDBP-221ENST00000619555 TMEM265A0A087WTH1 108 aa13.09□□□□□ -0.31
TARDBP-221ENST00000619555 RBM47A0AV96 593 aaKnown RBP13.09□□□□□ -0.31
TARDBP-221ENST00000619555 B4GALT4O60513 344 aa13.09□□□□□ -0.31
TARDBP-221ENST00000619555 KDM4AO75164 1064 aa13.09□□□□□ -0.31
TARDBP-221ENST00000619555 PBX2P40425 430 aa13.09□□□□□ -0.31
TARDBP-221ENST00000619555 CCL23P55773 120 aa13.09□□□□□ -0.31
TARDBP-221ENST00000619555 USH1GQ495M9 461 aa13.09□□□□□ -0.31
TARDBP-221ENST00000619555 DGKHQ86XP1 1220 aa13.09□□□□□ -0.31
TARDBP-221ENST00000619555 TIFAQ96CG3 184 aa13.09□□□□□ -0.31
TARDBP-221ENST00000619555 NOC4LQ9BVI4 516 aaKnown RBP13.09□□□□□ -0.31
TARDBP-221ENST00000619555 HIPK3Q9H422 1215 aa13.09□□□□□ -0.31
TARDBP-221ENST00000619555 IL23AQ9NPF7 189 aa13.09□□□□□ -0.31
TARDBP-221ENST00000619555 DIAPH3Q9NSV4 1193 aa13.09□□□□□ -0.31
TARDBP-221ENST00000619555 WDR19Q8NEZ3 1342 aa13.09□□□□□ -0.31
TARDBP-221ENST00000619555 LOC102724159A0A0B4J2E5 919 aa13.08□□□□□ -0.32
TARDBP-221ENST00000619555 B4E1Z4 1266 aa13.08□□□□□ -0.32
TARDBP-221ENST00000619555 MYL3P08590 195 aa13.08□□□□□ -0.32
TARDBP-221ENST00000619555 PDE4DQ08499 809 aa13.08□□□□□ -0.32
TARDBP-221ENST00000619555 PWP2Q15269 919 aaKnown RBP13.08□□□□□ -0.32
TARDBP-221ENST00000619555 PSRC1Q6PGN9 363 aaPredicted RBP13.08□□□□□ -0.32
TARDBP-221ENST00000619555 PNMA1Q8ND90 353 aa13.08□□□□□ -0.32
TARDBP-221ENST00000619555 OR6J1Q8NGC5 347 aa13.08□□□□□ -0.32
TARDBP-221ENST00000619555 TBC1D5Q92609 795 aa13.08□□□□□ -0.32
TARDBP-221ENST00000619555 COPS5Q92905 334 aa13.08□□□□□ -0.32
TARDBP-221ENST00000619555 PBX4Q9BYU1 374 aa13.08□□□□□ -0.32
TARDBP-221ENST00000619555 ZNF576Q9H609 170 aa13.08□□□□□ -0.32
TARDBP-221ENST00000619555 CXXC1Q9P0U4 656 aaPredicted RBP13.08□□□□□ -0.32
TARDBP-221ENST00000619555 PNMA2Q9UL42 364 aa13.08□□□□□ -0.32
TARDBP-221ENST00000619555 U3KPZ7 1027 aaPredicted RBP13.08□□□□□ -0.32
TARDBP-221ENST00000619555 FGBP02675 491 aa13.07□□□□□ -0.32
TARDBP-221ENST00000619555 EDNRBP24530 442 aa13.07□□□□□ -0.32
TARDBP-221ENST00000619555 GPATCH4Q5T3I0 446 aaKnown RBP13.07□□□□□ -0.32
TARDBP-221ENST00000619555 SKAP1Q86WV1 359 aa13.07□□□□□ -0.32
TARDBP-221ENST00000619555 IQCA1Q86XH1 822 aa13.07□□□□□ -0.32
TARDBP-221ENST00000619555 PPP1R13LQ8WUF5 828 aa13.07□□□□□ -0.32
TARDBP-221ENST00000619555 HERVK_113Q902F9 699 aa13.07□□□□□ -0.32
TARDBP-221ENST00000619555 ANKS1AQ92625 1134 aa13.07□□□□□ -0.32
TARDBP-221ENST00000619555 SEZ6LQ9BYH1 1024 aa13.07□□□□□ -0.32
TARDBP-221ENST00000619555 WNT8AQ9H1J5 351 aa13.07□□□□□ -0.32
TARDBP-221ENST00000619555 ALDH8A1Q9H2A2 487 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-221ENST00000619555 KAT14Q9H8E8 782 aa13.07□□□□□ -0.32
TARDBP-221ENST00000619555 TRMT13Q9NUP7 481 aaKnown RBP13.07□□□□□ -0.32
TARDBP-221ENST00000619555 POLR3EQ9NVU0 708 aa13.07□□□□□ -0.32
TARDBP-221ENST00000619555 ZSWIM5Q9P217 1185 aa13.07□□□□□ -0.32
TARDBP-221ENST00000619555 LAMA4Q16363 1823 aa13.06□□□□□ -0.32
TARDBP-221ENST00000619555 CYP2C9P11712 490 aa13.06□□□□□ -0.32
TARDBP-221ENST00000619555 CPT1AP50416 773 aa13.06□□□□□ -0.32
TARDBP-221ENST00000619555 PURAQ00577 322 aaKnown RBP13.06□□□□□ -0.32
TARDBP-221ENST00000619555 CDC37Q16543 378 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-221ENST00000619555 CCDC178Q5BJE1 867 aa13.06□□□□□ -0.32
TARDBP-221ENST00000619555 OTOP2Q7RTS6 562 aa13.06□□□□□ -0.32
TARDBP-221ENST00000619555 ADGRF4Q8IZF3 695 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms