RNA–Protein interactions for RNA: ENST00000619408.1

TVP23A-211, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-211ENST00000619408 PCDHA1Q9Y5I3 950 aa8.68□□□□□ -1.02
TVP23A-211ENST00000619408 FAM205CA6NFA0 338 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 SMTNL1A8MU46 457 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 C19orf81C9J6K1 198 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 M0R2N6 131 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 CUTAO60888 179 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 PPP1R11O60927 126 aaPredicted RBP8.67□□□□□ -1.02
TVP23A-211ENST00000619408 MARCKSP29966 332 aaPredicted RBP8.67□□□□□ -1.02
TVP23A-211ENST00000619408 SSR1P43307 286 aaKnown RBP8.67□□□□□ -1.02
TVP23A-211ENST00000619408 BACE1P56817 501 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 MAP3K9P80192 1104 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 SPP2Q13103 211 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 VGLL4Q14135 290 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 TTLL12Q14166 644 aaPredicted RBP8.67□□□□□ -1.02
TVP23A-211ENST00000619408 DHX8Q14562 1220 aaKnown RBP8.67□□□□□ -1.02
TVP23A-211ENST00000619408 PTPAQ15257 358 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 USH1GQ495M9 461 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 MCTP2Q6DN12 878 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 DHX37Q8IY37 1157 aaKnown RBP8.67□□□□□ -1.02
TVP23A-211ENST00000619408 SLF1Q9BQI6 1058 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 NUP62CLQ9H1M0 184 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 RANBP17Q9H2T7 1088 aaKnown RBP8.67□□□□□ -1.02
TVP23A-211ENST00000619408 PSTPIP2Q9H939 334 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.67□□□□□ -1.02
TVP23A-211ENST00000619408 TMOD4Q9NZQ9 345 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 TMEM63CQ9P1W3 806 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 FEZ2Q9UHY8 353 aaPredicted RBP8.67□□□□□ -1.02
TVP23A-211ENST00000619408 PCDHA7Q9UN72 937 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 CLEC11AQ9Y240 323 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 CTDP1Q9Y5B0 961 aaPredicted RBP8.67□□□□□ -1.02
TVP23A-211ENST00000619408 ZHX2Q9Y6X8 837 aa8.67□□□□□ -1.02
TVP23A-211ENST00000619408 PAPPA2Q9BXP8 1791 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 KIF2AO00139 706 aaPredicted RBP8.66□□□□□ -1.02
TVP23A-211ENST00000619408 KINO60870 393 aaKnown RBP8.66□□□□□ -1.02
TVP23A-211ENST00000619408 USP2O75604 605 aaPredicted RBP8.66□□□□□ -1.02
TVP23A-211ENST00000619408 LIG1P18858 919 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 VCAM1P19320 739 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 GUCY2CP25092 1073 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 MCM7P33993 719 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 SNAP25P60880 206 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 TPM4P67936 248 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 FAM160A1Q05DH4 1040 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 ORC2Q13416 577 aaPredicted RBP8.66□□□□□ -1.02
TVP23A-211ENST00000619408 ZNF174Q15697 407 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 INF2Q27J81 1249 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 EARS2Q5JPH6 523 aaKnown RBP8.66□□□□□ -1.02
TVP23A-211ENST00000619408 JAKMIP3Q5VZ66 844 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 CCDC174Q6PII3 467 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 ARMC9Q7Z3E5 817 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 NEK8Q86SG6 692 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 PRPF38AQ8NAV1 312 aaKnown RBP8.66□□□□□ -1.02
TVP23A-211ENST00000619408 ZNF397Q8NF99 534 aaPredicted RBP8.66□□□□□ -1.02
TVP23A-211ENST00000619408 RBM46Q8TBY0 533 aaKnown RBP8.66□□□□□ -1.02
TVP23A-211ENST00000619408 FERMT2Q96AC1 680 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 C12orf42Q96LP6 360 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 TNMDQ9H2S6 317 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 DEF6Q9H4E7 631 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 RPAP3Q9H6T3 665 aaPredicted RBP8.66□□□□□ -1.02
TVP23A-211ENST00000619408 MED4Q9NPJ6 270 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 DACT1Q9NYF0 836 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 FAM53CQ9NYF3 392 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 DONSONQ9NYP3 566 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 BIN2Q9UBW5 565 aaPredicted RBP8.66□□□□□ -1.02
TVP23A-211ENST00000619408 PNMA2Q9UL42 364 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 FZD1Q9UP38 647 aa8.66□□□□□ -1.02
TVP23A-211ENST00000619408 BAZ2BQ9UIF8 2168 aaKnown RBP8.65□□□□□ -1.02
TVP23A-211ENST00000619408 ABCB11O95342 1321 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 OTOFQ9HC10 1997 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 SYCE3A1L190 88 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 LAD1O00515 517 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 FLOT1O75955 427 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 FDX1P10109 184 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 PTPREP23469 700 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 CMA1P23946 247 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 CYP2C19P33261 490 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 HMGCS2P54868 508 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 ATP2C1P98194 919 aaPredicted RBP8.65□□□□□ -1.02
TVP23A-211ENST00000619408 AP3B2Q13367 1082 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 BMS1Q14692 1282 aaKnown RBP8.65□□□□□ -1.02
TVP23A-211ENST00000619408 UBE2SQ16763 222 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 SWT1Q5T5J6 900 aaKnown RBP8.65□□□□□ -1.02
TVP23A-211ENST00000619408 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.65□□□□□ -1.02
TVP23A-211ENST00000619408 ANKRD13AQ8IZ07 590 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 ZNF579Q8NAF0 562 aaKnown RBP8.65□□□□□ -1.02
TVP23A-211ENST00000619408 TBCKQ8TEA7 893 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 NAP1L4Q99733 375 aaKnown RBP8.65□□□□□ -1.02
TVP23A-211ENST00000619408 PLCD4Q9BRC7 762 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 GOLPH3LQ9H4A5 285 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 CLSTN2Q9H4D0 955 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 EMILIN3Q9NT22 766 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 FBXO28Q9NVF7 368 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 TMEM260Q9NX78 707 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 FBXO2Q9UK22 296 aaPredicted RBP8.65□□□□□ -1.02
TVP23A-211ENST00000619408 MRPL11Q9Y3B7 192 aaKnown RBP8.65□□□□□ -1.02
TVP23A-211ENST00000619408 SRPRBQ9Y5M8 271 aaKnown RBP8.65□□□□□ -1.02
TVP23A-211ENST00000619408 SNCAIPQ9Y6H5 919 aa8.65□□□□□ -1.02
TVP23A-211ENST00000619408 SPDYE3A6NKU9 549 aa8.64□□□□□ -1.03
TVP23A-211ENST00000619408 POTECB2RU33 542 aa8.64□□□□□ -1.03
TVP23A-211ENST00000619408 ADAMTS3O15072 1205 aa8.64□□□□□ -1.03
TVP23A-211ENST00000619408 CTAGE5O15320 804 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms