RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 EPHB4P54760 987 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 ANKRD40Q6AI12 368 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 IQCA1Q86XH1 822 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 PLCD4Q9BRC7 762 aa14.6□□□□□ -0.07
MSH6-214ENST00000616033 MEGF6O75095 1541 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 TARSL2A2RTX5 802 aaKnown RBP14.59□□□□□ -0.07
MSH6-214ENST00000616033 GOLGA6L10A6NI86 522 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 SEMA3EO15041 775 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 PPP1R12BO60237 982 aaPredicted RBP14.59□□□□□ -0.07
MSH6-214ENST00000616033 ZNF473Q8WTR7 871 aaKnown RBP14.59□□□□□ -0.07
MSH6-214ENST00000616033 CCT8L2Q96SF2 557 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 PHF20Q9BVI0 1012 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 SALL4Q9UJQ4 1053 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 CCDC194A0A1B0GVG4 234 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 STK4Q13043 487 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 LRRC41Q15345 812 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 HAUS3Q68CZ6 603 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 DTHD1Q6ZMT9 781 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 CCDC121Q6ZUS5 278 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 TRIM58Q8NG06 486 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 RNF26Q9BY78 433 aaPredicted RBP14.59□□□□□ -0.07
MSH6-214ENST00000616033 VAT1LQ9HCJ6 419 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 TCRBV5S4A2TA0A5A2 114 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 ADGRA1Q86SQ6 560 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 RPGRIP1Q96KN7 1286 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 ZSCAN10Q96SZ4 725 aaPredicted RBP14.59□□□□□ -0.07
MSH6-214ENST00000616033 DNAJC7Q99615 494 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 ASAP1Q9ULH1 1129 aa14.59□□□□□ -0.07
MSH6-214ENST00000616033 SHOX2O60902 331 aaPredicted RBP14.58□□□□□ -0.08
MSH6-214ENST00000616033 CPP00450 1065 aa14.58□□□□□ -0.08
MSH6-214ENST00000616033 CLNS1AP54105 237 aaKnown RBP14.58□□□□□ -0.08
MSH6-214ENST00000616033 CCDC40Q4G0X9 1142 aa14.58□□□□□ -0.08
MSH6-214ENST00000616033 MEX3CQ5U5Q3 659 aaKnown RBP14.58□□□□□ -0.08
MSH6-214ENST00000616033 ADSSL1Q8N142 457 aa14.58□□□□□ -0.08
MSH6-214ENST00000616033 SRBD1Q8N5C6 995 aaKnown RBP14.58□□□□□ -0.08
MSH6-214ENST00000616033 UBLCP1Q8WVY7 318 aaPredicted RBP14.58□□□□□ -0.08
MSH6-214ENST00000616033 TMEM60Q9H2L4 133 aa14.58□□□□□ -0.08
MSH6-214ENST00000616033 IRAK4Q9NWZ3 460 aa14.58□□□□□ -0.08
MSH6-214ENST00000616033 LRRC10BA6NIK2 292 aa14.58□□□□□ -0.08
MSH6-214ENST00000616033 SLC1A4P43007 532 aa14.58□□□□□ -0.08
MSH6-214ENST00000616033 ATP2C1P98194 919 aaPredicted RBP14.58□□□□□ -0.08
MSH6-214ENST00000616033 MAP2K1Q02750 393 aaPredicted RBP14.58□□□□□ -0.08
MSH6-214ENST00000616033 HEATR3Q7Z4Q2 680 aa14.58□□□□□ -0.08
MSH6-214ENST00000616033 TMTC2Q8N394 836 aa14.58□□□□□ -0.08
MSH6-214ENST00000616033 RNF41Q9H4P4 317 aaPredicted RBP14.58□□□□□ -0.08
MSH6-214ENST00000616033 KLC4Q9NSK0 619 aa14.58□□□□□ -0.08
MSH6-214ENST00000616033 HAUS2Q9NVX0 235 aa14.58□□□□□ -0.08
MSH6-214ENST00000616033 TBC1D7Q9P0N9 293 aa14.58□□□□□ -0.08
MSH6-214ENST00000616033 ARHGAP20Q9P2F6 1191 aa14.58□□□□□ -0.08
MSH6-214ENST00000616033 HYOU1Q9Y4L1 999 aa14.58□□□□□ -0.08
MSH6-214ENST00000616033 ZNF233A6NK53 670 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 LRRC53A6NM62 1247 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 SLC5A1P13866 664 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 CTSWP56202 376 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 ZBTB38Q8NAP3 1195 aaPredicted RBP14.57□□□□□ -0.08
MSH6-214ENST00000616033 ODF2LQ9ULJ1 636 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 C5P01031 1676 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 USP17L12C9JPN9 530 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 USP17L21D6R901 530 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 OPLAHO14841 1288 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 ZBED6P86452 979 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 LETM2Q2VYF4 491 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 ADAT2Q7Z6V5 191 aaKnown RBP14.57□□□□□ -0.08
MSH6-214ENST00000616033 NLRP14Q86W24 1093 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 ELOA2Q8IYF1 753 aaPredicted RBP14.57□□□□□ -0.08
MSH6-214ENST00000616033 AP1M1Q9BXS5 423 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 PLAAQ9Y263 795 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 GYG1P46976 350 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 CCDC13Q8IYE1 715 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 MSL3Q8N5Y2 521 aaKnown RBP14.57□□□□□ -0.08
MSH6-214ENST00000616033 UHMK1Q8TAS1 419 aaKnown RBP14.57□□□□□ -0.08
MSH6-214ENST00000616033 MTMR8Q96EF0 704 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 BAIAP2L1Q9UHR4 511 aa14.57□□□□□ -0.08
MSH6-214ENST00000616033 G3BP2Q9UN86 482 aaKnown RBP14.57□□□□□ -0.08
MSH6-214ENST00000616033 ENO4A6NNW6 628 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 UQCRFS1P1P0C7P4 283 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 IL2RBP14784 551 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 ZKSCAN4Q969J2 545 aaPredicted RBP14.56□□□□□ -0.08
MSH6-214ENST00000616033 ZHX3Q9H4I2 956 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 DISC1Q9NRI5 854 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 TLDC2A0PJX2 215 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 RASSF10A6NK89 507 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 TMCO5BA8MYB1 307 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 GOLGA8HP0CJ92 632 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 PUM3Q15397 648 aaKnown RBP14.56□□□□□ -0.08
MSH6-214ENST00000616033 MICALCLQ6ZW33 695 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 IFT20Q8IY31 132 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 GGT7Q9UJ14 662 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 MYO5AQ9Y4I1 1855 aaKnown RBP14.56□□□□□ -0.08
MSH6-214ENST00000616033 MAGEB6P1A0A0J9YX57 407 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 TSPY2A6NKD2 308 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 PPP1R37O75864 691 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 GCKP35557 465 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 SPRED3Q2MJR0 410 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 STAG1Q8WVM7 1258 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 ACSBG1Q96GR2 724 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 ISCA1Q9BUE6 129 aa14.56□□□□□ -0.08
MSH6-214ENST00000616033 FAM205AQ6ZU69 1335 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 CCDC189A1A4V9 331 aa14.55□□□□□ -0.08
MSH6-214ENST00000616033 CYP2D6P10635 497 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms