RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 MUM1L1Q5H9M0 696 aa23.08■■□□□ 1.29
CPNE9-205ENST00000613455 AXDND1Q5T1B0 1012 aaPredicted RBP23.08■■□□□ 1.29
CPNE9-205ENST00000613455 SNRNP48Q6IEG0 339 aaKnown RBP23.08■■□□□ 1.29
CPNE9-205ENST00000613455 HOMER2Q9NSB8 354 aa23.08■■□□□ 1.29
CPNE9-205ENST00000613455 GCOM1H8Y6P7 765 aaPredicted RBP23.08■■□□□ 1.28
CPNE9-205ENST00000613455 BMP15O95972 392 aa23.08■■□□□ 1.28
CPNE9-205ENST00000613455 POLR2MP0CAP2 368 aa23.08■■□□□ 1.28
CPNE9-205ENST00000613455 CETPP11597 493 aa23.08■■□□□ 1.28
CPNE9-205ENST00000613455 GHRHRQ02643 423 aa23.08■■□□□ 1.28
CPNE9-205ENST00000613455 LETM2Q2VYF4 491 aa23.08■■□□□ 1.28
CPNE9-205ENST00000613455 RASAL3Q86YV0 1011 aa23.08■■□□□ 1.28
CPNE9-205ENST00000613455 TEX13BQ9BXU2 312 aa23.08■■□□□ 1.28
CPNE9-205ENST00000613455 HSD17B4P51659 736 aa23.07■■□□□ 1.28
CPNE9-205ENST00000613455 HERVK_113P62684 666 aa23.07■■□□□ 1.28
CPNE9-205ENST00000613455 ATP2C1P98194 919 aaPredicted RBP23.07■■□□□ 1.28
CPNE9-205ENST00000613455 PABPC4Q13310 644 aaKnown RBP eCLIP23.07■■□□□ 1.28
CPNE9-205ENST00000613455 ADALQ6DHV7 355 aa23.07■■□□□ 1.28
CPNE9-205ENST00000613455 MCTP2Q6DN12 878 aa23.07■■□□□ 1.28
CPNE9-205ENST00000613455 MB21D1Q8N884 522 aa23.07■■□□□ 1.28
CPNE9-205ENST00000613455 JMYQ8N9B5 988 aa23.07■■□□□ 1.28
CPNE9-205ENST00000613455 CRYGNQ8WXF5 182 aa23.07■■□□□ 1.28
CPNE9-205ENST00000613455 BRI3BPQ8WY22 251 aa23.07■■□□□ 1.28
CPNE9-205ENST00000613455 BTBD7Q9P203 1132 aa23.07■■□□□ 1.28
CPNE9-205ENST00000613455 CCL15-CCL14A0A0B4J2E2 113 aa23.06■■□□□ 1.28
CPNE9-205ENST00000613455 GOLGA6L4A6NEF3 574 aa23.06■■□□□ 1.28
CPNE9-205ENST00000613455 FOSP01100 380 aaPredicted RBP23.06■■□□□ 1.28
CPNE9-205ENST00000613455 PTGDRQ13258 359 aa23.06■■□□□ 1.28
CPNE9-205ENST00000613455 CCL15Q16663 113 aa23.06■■□□□ 1.28
CPNE9-205ENST00000613455 C4orf32Q8N8J7 132 aa23.06■■□□□ 1.28
CPNE9-205ENST00000613455 TRERF1Q96PN7 1200 aa23.06■■□□□ 1.28
CPNE9-205ENST00000613455 RNF146Q9NTX7 359 aa23.06■■□□□ 1.28
CPNE9-205ENST00000613455 FBXO2Q9UK22 296 aaPredicted RBP23.06■■□□□ 1.28
CPNE9-205ENST00000613455 SPDYE3A6NKU9 549 aa23.05■■□□□ 1.28
CPNE9-205ENST00000613455 PEX10O60683 326 aa23.05■■□□□ 1.28
CPNE9-205ENST00000613455 PTPREP23469 700 aa23.05■■□□□ 1.28
CPNE9-205ENST00000613455 A0A1W2PQ27 194 aa23.05■■□□□ 1.28
CPNE9-205ENST00000613455 A0A1W2PQ64 194 aa23.05■■□□□ 1.28
CPNE9-205ENST00000613455 A0A1W2PQD8 194 aa23.05■■□□□ 1.28
CPNE9-205ENST00000613455 BTBD19C9JJ37 291 aa23.05■■□□□ 1.28
CPNE9-205ENST00000613455 CCNT1O60563 726 aaKnown RBP23.05■■□□□ 1.28
CPNE9-205ENST00000613455 OSBPP22059 807 aa23.05■■□□□ 1.28
CPNE9-205ENST00000613455 STAT3P40763 770 aa23.05■■□□□ 1.28
CPNE9-205ENST00000613455 GRIN1Q05586 938 aa23.05■■□□□ 1.28
CPNE9-205ENST00000613455 MCF2L2Q86YR7 1114 aa23.05■■□□□ 1.28
CPNE9-205ENST00000613455 KRI1Q8N9T8 703 aaKnown RBP23.05■■□□□ 1.28
CPNE9-205ENST00000613455 TLL2Q9Y6L7 1015 aa23.05■■□□□ 1.28
CPNE9-205ENST00000613455 CNMDO75829 334 aa23.04■■□□□ 1.28
CPNE9-205ENST00000613455 TOMM70O94826 608 aa23.04■■□□□ 1.28
CPNE9-205ENST00000613455 LIG1P18858 919 aa23.04■■□□□ 1.28
CPNE9-205ENST00000613455 SREBF1P36956 1147 aa23.04■■□□□ 1.28
CPNE9-205ENST00000613455 ZNF157P51786 506 aaPredicted RBP23.04■■□□□ 1.28
CPNE9-205ENST00000613455 PLS1Q14651 629 aa23.04■■□□□ 1.28
CPNE9-205ENST00000613455 FCHSD1Q86WN1 690 aa23.04■■□□□ 1.28
CPNE9-205ENST00000613455 CLIC6Q96NY7 704 aa23.04■■□□□ 1.28
CPNE9-205ENST00000613455 TMEM60Q9H2L4 133 aa23.04■■□□□ 1.28
CPNE9-205ENST00000613455 COL20A1Q9P218 1284 aa23.04■■□□□ 1.28
CPNE9-205ENST00000613455 SLC45A1Q9Y2W3 748 aa23.04■■□□□ 1.28
CPNE9-205ENST00000613455 SRPRBQ9Y5M8 271 aaKnown RBP23.04■■□□□ 1.28
CPNE9-205ENST00000613455 CUTAO60888 179 aa23.03■■□□□ 1.28
CPNE9-205ENST00000613455 TDP2O95551 362 aa23.03■■□□□ 1.28
CPNE9-205ENST00000613455 ARHGAP4P98171 946 aa23.03■■□□□ 1.28
CPNE9-205ENST00000613455 ORC2Q13416 577 aaPredicted RBP23.03■■□□□ 1.28
CPNE9-205ENST00000613455 TKFCQ3LXA3 575 aa23.03■■□□□ 1.28
CPNE9-205ENST00000613455 RGMBQ6NW40 437 aa23.03■■□□□ 1.28
CPNE9-205ENST00000613455 GOLPH3LQ9H4A5 285 aa23.03■■□□□ 1.28
CPNE9-205ENST00000613455 PPP4R3AQ6IN85 833 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 ANKRD23Q86SG2 305 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 CCAR1Q8IX12 1150 aaKnown RBP23.02■■□□□ 1.28
CPNE9-205ENST00000613455 SAMD3Q8N6K7 520 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 TXNRD2Q9NNW7 524 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 PNMA3Q9UL41 463 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 PDHXO00330 501 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 SLC37A4O43826 429 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 NEMFO60524 1076 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 USP11P51784 963 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 RPS6P62753 249 aaKnown RBP23.02■■□□□ 1.28
CPNE9-205ENST00000613455 SHC4Q6S5L8 630 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 SLC30A10Q6XR72 485 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 FAM43AQ8N2R8 423 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 PTPN18Q99952 460 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 PAGR1Q9BTK6 254 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 SPATC1LQ9H0A9 340 aa23.02■■□□□ 1.28
CPNE9-205ENST00000613455 MAP3K20Q9NYL2 800 aaKnown RBP23.02■■□□□ 1.28
CPNE9-205ENST00000613455 CYP2C8P10632 490 aa23.01■■□□□ 1.27
CPNE9-205ENST00000613455 CAVIN1Q6NZI2 390 aaKnown RBP23.01■■□□□ 1.27
CPNE9-205ENST00000613455 POTEDQ86YR6 584 aa23.01■■□□□ 1.27
CPNE9-205ENST00000613455 RIOX2Q8IUF8 465 aa23.01■■□□□ 1.27
CPNE9-205ENST00000613455 FSIP1Q8NA03 581 aa23.01■■□□□ 1.27
CPNE9-205ENST00000613455 SYTL5Q8TDW5 730 aaPredicted RBP23.01■■□□□ 1.27
CPNE9-205ENST00000613455 MRPS27Q92552 414 aaKnown RBP23.01■■□□□ 1.27
CPNE9-205ENST00000613455 FERMT2Q96AC1 680 aa23.01■■□□□ 1.27
CPNE9-205ENST00000613455 ACAD9Q9H845 621 aa23.01■■□□□ 1.27
CPNE9-205ENST00000613455 RBPJLQ9UBG7 517 aa23.01■■□□□ 1.27
CPNE9-205ENST00000613455 LCTP09848 1927 aa23■■□□□ 1.27
CPNE9-205ENST00000613455 TESPA1A2RU30 521 aaPredicted RBP23■■□□□ 1.27
CPNE9-205ENST00000613455 SLC10A3P09131 477 aa23■■□□□ 1.27
CPNE9-205ENST00000613455 GCFC2P16383 781 aaKnown RBP23■■□□□ 1.27
CPNE9-205ENST00000613455 CMA1P23946 247 aa23■■□□□ 1.27
CPNE9-205ENST00000613455 IL17AQ16552 155 aa23■■□□□ 1.27
CPNE9-205ENST00000613455 ARL6IP4Q66PJ3 421 aaKnown RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms