RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 OSBPP22059 807 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 LMOD1P29536 600 aaPredicted RBP10.18□□□□□ -0.78
CCDC47-207ENST00000612558 ECE1P42892 770 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 MAP3K11Q16584 847 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 NOM1Q5C9Z4 860 aaKnown RBP10.18□□□□□ -0.78
CCDC47-207ENST00000612558 C9orf131Q5VYM1 1079 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 BTNL9Q6UXG8 535 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 FMR1NBQ8N0W7 255 aaPredicted RBP10.18□□□□□ -0.78
CCDC47-207ENST00000612558 COA7Q96BR5 231 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 TSPY26PQ9H489 355 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 SRPRBQ9Y5M8 271 aaKnown RBP10.18□□□□□ -0.78
CCDC47-207ENST00000612558 PPP2R3BQ9Y5P8 575 aa10.18□□□□□ -0.78
CCDC47-207ENST00000612558 FAM237AA0A1B0GTK4 181 aa10.17□□□□□ -0.78
CCDC47-207ENST00000612558 TMEM232C9JQI7 657 aa10.17□□□□□ -0.78
CCDC47-207ENST00000612558 ADAMTS3O15072 1205 aa10.17□□□□□ -0.78
CCDC47-207ENST00000612558 NDUFA8P51970 172 aa10.17□□□□□ -0.78
CCDC47-207ENST00000612558 HIRAP54198 1017 aaPredicted RBP10.17□□□□□ -0.78
CCDC47-207ENST00000612558 CAMK4Q16566 473 aa10.17□□□□□ -0.78
CCDC47-207ENST00000612558 NBPF12Q5TAG4 269 aaPredicted RBP10.17□□□□□ -0.78
CCDC47-207ENST00000612558 RESP18Q5W5W9 173 aa10.17□□□□□ -0.78
CCDC47-207ENST00000612558 RBM43Q6ZSC3 357 aaKnown RBP10.17□□□□□ -0.78
CCDC47-207ENST00000612558 KRT25Q7Z3Z0 450 aa10.17□□□□□ -0.78
CCDC47-207ENST00000612558 RASGRP4Q8TDF6 673 aa10.17□□□□□ -0.78
CCDC47-207ENST00000612558 CLIC6Q96NY7 704 aa10.17□□□□□ -0.78
CCDC47-207ENST00000612558 ZNF341Q9BYN7 854 aa10.17□□□□□ -0.78
CCDC47-207ENST00000612558 VCPKMTQ9H867 229 aa10.17□□□□□ -0.78
CCDC47-207ENST00000612558 ADARB2Q9NS39 739 aaKnown RBP10.17□□□□□ -0.78
CCDC47-207ENST00000612558 FBXO2Q9UK22 296 aaPredicted RBP10.17□□□□□ -0.78
CCDC47-207ENST00000612558 PPP1R11O60927 126 aaPredicted RBP10.16□□□□□ -0.78
CCDC47-207ENST00000612558 PFKFB1P16118 471 aa10.16□□□□□ -0.78
CCDC47-207ENST00000612558 ADCY7P51828 1080 aa10.16□□□□□ -0.78
CCDC47-207ENST00000612558 STAT2P52630 851 aa10.16□□□□□ -0.78
CCDC47-207ENST00000612558 MRPL12P52815 198 aaKnown RBP10.16□□□□□ -0.78
CCDC47-207ENST00000612558 IKQ13123 557 aaPredicted RBP10.16□□□□□ -0.78
CCDC47-207ENST00000612558 NONOQ15233 471 aaKnown RBP eCLIP10.16□□□□□ -0.78
CCDC47-207ENST00000612558 ZNF174Q15697 407 aa10.16□□□□□ -0.78
CCDC47-207ENST00000612558 CDC37Q16543 378 aaPredicted RBP10.16□□□□□ -0.78
CCDC47-207ENST00000612558 QRICH1Q2TAL8 776 aa10.16□□□□□ -0.78
CCDC47-207ENST00000612558 SYDE2Q5VT97 1194 aa10.16□□□□□ -0.78
CCDC47-207ENST00000612558 SHC4Q6S5L8 630 aa10.16□□□□□ -0.78
CCDC47-207ENST00000612558 SPICE1Q8N0Z3 855 aa10.16□□□□□ -0.78
CCDC47-207ENST00000612558 REXO1Q8N1G1 1221 aaKnown RBP10.16□□□□□ -0.78
CCDC47-207ENST00000612558 FERMT2Q96AC1 680 aa10.16□□□□□ -0.78
CCDC47-207ENST00000612558 NUP88Q99567 741 aaPredicted RBP10.16□□□□□ -0.78
CCDC47-207ENST00000612558 GLT8D2Q9H1C3 349 aa10.16□□□□□ -0.78
CCDC47-207ENST00000612558 RIC8AQ9NPQ8 531 aa10.16□□□□□ -0.78
CCDC47-207ENST00000612558 GGA3Q9NZ52 723 aa10.16□□□□□ -0.78
CCDC47-207ENST00000612558 PITPNM2Q9BZ72 1349 aa10.16□□□□□ -0.78
CCDC47-207ENST00000612558 C3orf80F5H4A9 247 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 WNT7AO00755 349 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 PLA2G6O60733 806 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 ZNF202O95125 648 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 CCDC192P0DO97 292 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 XRCC6P12956 609 aaKnown RBP eCLIP10.15□□□□□ -0.78
CCDC47-207ENST00000612558 ATP2C1P98194 919 aaPredicted RBP10.15□□□□□ -0.78
CCDC47-207ENST00000612558 PTGDRQ13258 359 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 SUPT20HL1Q3ZLR7 823 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 KIAA1755Q5JYT7 1200 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 CHURC1Q8WUH1 139 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 CUL5Q93034 780 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 TIGD1Q96MW7 591 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 FUCA2Q9BTY2 467 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 AMNQ9BXJ7 453 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 RBSNQ9H1K0 784 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 FAM13BQ9NYF5 915 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 BIN2Q9UBW5 565 aaPredicted RBP10.15□□□□□ -0.78
CCDC47-207ENST00000612558 ZNF112Q9UJU3 913 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 HPSEQ9Y251 543 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 PCDHA1Q9Y5I3 950 aa10.15□□□□□ -0.78
CCDC47-207ENST00000612558 POLR2AP24928 1970 aaKnown RBP10.15□□□□□ -0.78
CCDC47-207ENST00000612558 LCE2BO14633 110 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 MCM7P33993 719 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 SYKP43405 635 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 TRAF1Q13077 416 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 GPR162Q16538 588 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 INF2Q27J81 1249 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 FAM83BQ5T0W9 1011 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 SWT1Q5T5J6 900 aaKnown RBP10.14□□□□□ -0.79
CCDC47-207ENST00000612558 ARL6IP4Q66PJ3 421 aaKnown RBP10.14□□□□□ -0.79
CCDC47-207ENST00000612558 ZNF787Q6DD87 383 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 FAM160B2Q86V87 743 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 CKAP2LQ8IYA6 745 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 FEZ1Q99689 392 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 SDF4Q9BRK5 362 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 PSTPIP2Q9H939 334 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 CDHR5Q9HBB8 845 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.14□□□□□ -0.79
CCDC47-207ENST00000612558 FEM1BQ9UK73 627 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 KCNH3Q9ULD8 1083 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 PRR12Q9ULL5 1215 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 ATAD5Q96QE3 1844 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 LAD1O00515 517 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 GRIN3BO60391 1043 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 INPP5BP32019 993 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 CLK2P49760 499 aaKnown RBP10.14□□□□□ -0.79
CCDC47-207ENST00000612558 COPS2P61201 443 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 GRIN1Q05586 938 aa10.14□□□□□ -0.79
CCDC47-207ENST00000612558 ORC2Q13416 577 aaPredicted RBP10.14□□□□□ -0.79
CCDC47-207ENST00000612558 ZYXQ15942 572 aaKnown RBP10.14□□□□□ -0.79
CCDC47-207ENST00000612558 PRAMEF18Q5VWM3 479 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms