RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CBFA2T2O43439 604 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 CD247P20963 164 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 BMP8BP34820 402 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 CTSKP43235 329 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 PLP2Q04941 152 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 CNKSR3Q6P9H4 555 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 GIMAP6Q6P9H5 292 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 HHIPL2Q6UWX4 724 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 ADAT2Q7Z6V5 191 aaKnown RBP6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 LINC01356Q8N9X3 169 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 TP53I13Q8NBR0 393 aaPredicted RBP6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 MZB1Q8WU39 189 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 FGD4Q96M96 766 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 DNAJC7Q99615 494 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 FOXP3Q9BZS1 431 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 KLHL25Q9H0H3 589 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 GBP3Q9H0R5 595 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 EPN3Q9H201 632 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 GP6Q9HCN6 339 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 MINPP1Q9UNW1 487 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 ZNF451Q9Y4E5 1061 aa6.42□□□□□ -1.38
SMCHD1-213ENST00000609587 A0A087WZG4 1122 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 SSU72P8A0A1W2PR75 194 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 TMEM82A0PJX8 343 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 PRICKLE3O43900 615 aaPredicted RBP6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 GSNP06396 782 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 SYPP08247 313 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 ITGA4P13612 1032 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 ENDOUP21128 410 aaKnown RBP6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 ZNF445P59923 1031 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 YBX1P67809 324 aaKnown RBP6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 RTP5Q14D33 572 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 SLC10A6Q3KNW5 377 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 SV2CQ496J9 727 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 IGDCC3Q8IVU1 814 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 PFDN2Q9UHV9 154 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 MYRFQ9Y2G1 1151 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 FHOD1Q9Y613 1164 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 SHROOM4Q9ULL8 1493 aa6.41□□□□□ -1.38
SMCHD1-213ENST00000609587 AKAP8O43823 692 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 PPM1BO75688 479 aa6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 ZNF205O95201 554 aa6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 VAV1P15498 845 aa6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 RPL10P27635 214 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 NOL9Q5SY16 702 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 SPATC1Q76KD6 591 aa6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 WAPLQ7Z5K2 1190 aa6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 PPP1R14AQ96A00 147 aa6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 ZNF669Q96BR6 464 aaPredicted RBP6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 DSCC1Q9BVC3 393 aa6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 CRTAC1Q9NQ79 661 aa6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 WHRNQ9P202 907 aa6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 TMA7Q9Y2S6 64 aaKnown RBP6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 SUGT1Q9Y2Z0 365 aa6.4□□□□□ -1.38
SMCHD1-213ENST00000609587 IQCA1LA6NCM1 817 aa6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 AGRPO00253 132 aa6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 MEIS1O00470 390 aa6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 SUV39H1O43463 412 aa6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 NRDCO43847 1150 aa6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 KIR2DL1P43626 348 aaPredicted RBP6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 KIR2DL2P43627 348 aaPredicted RBP6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 KRTAP1-1Q07627 177 aa6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 SSRP1Q08945 709 aaKnown RBP6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 ADCY4Q8NFM4 1077 aa6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 MAP6Q96JE9 813 aa6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 LRP2BPQ9P2M1 347 aa6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 APEX2Q9UBZ4 518 aa6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 ZMYM5Q9UJ78 669 aa6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 KDM2BQ8NHM5 1336 aa6.39□□□□□ -1.39
SMCHD1-213ENST00000609587 TLDC2A0PJX2 215 aa6.38□□□□□ -1.39
SMCHD1-213ENST00000609587 SMARCA5O60264 1052 aaPredicted RBP6.38□□□□□ -1.39
SMCHD1-213ENST00000609587 DIAPH1O60610 1272 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-213ENST00000609587 CWF19L1Q69YN2 538 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-213ENST00000609587 CRTC3Q6UUV7 619 aa6.38□□□□□ -1.39
SMCHD1-213ENST00000609587 JAZF1Q86VZ6 243 aa6.38□□□□□ -1.39
SMCHD1-213ENST00000609587 LILRB2Q8N423 598 aa6.38□□□□□ -1.39
SMCHD1-213ENST00000609587 FIBCD1Q8N539 461 aa6.38□□□□□ -1.39
SMCHD1-213ENST00000609587 BRF1Q92994 677 aa6.38□□□□□ -1.39
SMCHD1-213ENST00000609587 FCRL2Q96LA5 508 aaPredicted RBP6.38□□□□□ -1.39
SMCHD1-213ENST00000609587 PLCD4Q9BRC7 762 aa6.38□□□□□ -1.39
SMCHD1-213ENST00000609587 DIS3Q9Y2L1 958 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-213ENST00000609587 SF3B6Q9Y3B4 125 aaKnown RBP6.38□□□□□ -1.39
SMCHD1-213ENST00000609587 TBX22Q9Y458 520 aa6.38□□□□□ -1.39
SMCHD1-213ENST00000609587 NOP56O00567 594 aaKnown RBP6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 FKTNO75072 461 aa6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 TNFRSF1AP19438 455 aa6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 ERVFRD-1P60508 538 aa6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 LRRC47Q8N1G4 583 aaKnown RBP6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 ZNF513Q8N8E2 541 aaPredicted RBP6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 SGSM3Q96HU1 749 aa6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 HHIPL1Q96JK4 782 aa6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 PWWP2AQ96N64 755 aa6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 SPATA9Q9BWV2 254 aa6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 SLC12A9Q9BXP2 914 aa6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 NOL6Q9H6R4 1146 aaKnown RBP6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 TNFRSF10DQ9UBN6 386 aa6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 AKT3Q9Y243 479 aa6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 MRPL42Q9Y6G3 142 aaKnown RBP6.37□□□□□ -1.39
SMCHD1-213ENST00000609587 H0Y8X5 98 aa6.36□□□□□ -1.39
SMCHD1-213ENST00000609587 ITGAVP06756 1048 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms