RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 SAMD3Q8N6K7 520 aa25.73■■□□□ 1.71
IRF3-228ENST00000601291 P2RX7Q99572 595 aaKnown RBP25.73■■□□□ 1.71
IRF3-228ENST00000601291 SLC45A1Q9Y2W3 748 aa25.73■■□□□ 1.71
IRF3-228ENST00000601291 MORC2Q9Y6X9 1032 aaPredicted RBP25.73■■□□□ 1.71
IRF3-228ENST00000601291 HOXA13P31271 388 aaPredicted RBP25.72■■□□□ 1.71
IRF3-228ENST00000601291 MCM7P33993 719 aa25.72■■□□□ 1.71
IRF3-228ENST00000601291 HERVK_113P62684 666 aa25.72■■□□□ 1.71
IRF3-228ENST00000601291 ORC2Q13416 577 aaPredicted RBP25.72■■□□□ 1.71
IRF3-228ENST00000601291 KLHL40Q2TBA0 621 aa25.72■■□□□ 1.71
IRF3-228ENST00000601291 LETM2Q2VYF4 491 aa25.72■■□□□ 1.71
IRF3-228ENST00000601291 TRERF1Q96PN7 1200 aa25.72■■□□□ 1.71
IRF3-228ENST00000601291 HOMER2Q9NSB8 354 aa25.72■■□□□ 1.71
IRF3-228ENST00000601291 MAP3K20Q9NYL2 800 aaKnown RBP25.72■■□□□ 1.71
IRF3-228ENST00000601291 PLS1Q14651 629 aa25.71■■□□□ 1.71
IRF3-228ENST00000601291 TPRNQ4KMQ1 711 aa25.71■■□□□ 1.71
IRF3-228ENST00000601291 RGMBQ6NW40 437 aa25.71■■□□□ 1.71
IRF3-228ENST00000601291 CLEC4DQ8WXI8 215 aa25.71■■□□□ 1.71
IRF3-228ENST00000601291 NAP1L4Q99733 375 aaKnown RBP25.71■■□□□ 1.71
IRF3-228ENST00000601291 EHMT1Q9H9B1 1298 aa25.71■■□□□ 1.71
IRF3-228ENST00000601291 RNF146Q9NTX7 359 aa25.71■■□□□ 1.71
IRF3-228ENST00000601291 PCDHA7Q9UN72 937 aa25.71■■□□□ 1.71
IRF3-228ENST00000601291 TLL2Q9Y6L7 1015 aa25.71■■□□□ 1.71
IRF3-228ENST00000601291 COL11A1P12107 1806 aaPredicted RBP25.7■■□□□ 1.71
IRF3-228ENST00000601291 WNT7AO00755 349 aa25.7■■□□□ 1.71
IRF3-228ENST00000601291 MARCKSP29966 332 aaPredicted RBP25.7■■□□□ 1.71
IRF3-228ENST00000601291 STAT3P40763 770 aa25.7■■□□□ 1.71
IRF3-228ENST00000601291 ANKRD23Q86SG2 305 aa25.7■■□□□ 1.71
IRF3-228ENST00000601291 RASAL3Q86YV0 1011 aa25.7■■□□□ 1.71
IRF3-228ENST00000601291 GTF3C2Q8WUA4 911 aaPredicted RBP25.7■■□□□ 1.71
IRF3-228ENST00000601291 NFIBO00712 420 aa25.69■■□□□ 1.7
IRF3-228ENST00000601291 CCNT1O60563 726 aaKnown RBP25.69■■□□□ 1.7
IRF3-228ENST00000601291 HSD17B4P51659 736 aa25.69■■□□□ 1.7
IRF3-228ENST00000601291 GHRHRQ02643 423 aa25.69■■□□□ 1.7
IRF3-228ENST00000601291 MUM1L1Q5H9M0 696 aa25.69■■□□□ 1.7
IRF3-228ENST00000601291 ADALQ6DHV7 355 aa25.69■■□□□ 1.7
IRF3-228ENST00000601291 GPT2Q8TD30 523 aa25.69■■□□□ 1.7
IRF3-228ENST00000601291 BRI3BPQ8WY22 251 aa25.69■■□□□ 1.7
IRF3-228ENST00000601291 YY1P25490 414 aa25.69■■□□□ 1.7
IRF3-228ENST00000601291 ATP2C1P98194 919 aaPredicted RBP25.69■■□□□ 1.7
IRF3-228ENST00000601291 FCHSD1Q86WN1 690 aa25.69■■□□□ 1.7
IRF3-228ENST00000601291 KRI1Q8N9T8 703 aaKnown RBP25.69■■□□□ 1.7
IRF3-228ENST00000601291 RBBP6Q7Z6E9 1792 aaKnown RBP25.68■■□□□ 1.7
IRF3-228ENST00000601291 BTBD19C9JJ37 291 aa25.68■■□□□ 1.7
IRF3-228ENST00000601291 PDHXO00330 501 aa25.68■■□□□ 1.7
IRF3-228ENST00000601291 FSTL1Q12841 308 aa25.68■■□□□ 1.7
IRF3-228ENST00000601291 PTGDRQ13258 359 aa25.68■■□□□ 1.7
IRF3-228ENST00000601291 TBC1D5Q92609 795 aa25.68■■□□□ 1.7
IRF3-228ENST00000601291 MAF1Q9H063 256 aa25.68■■□□□ 1.7
IRF3-228ENST00000601291 ACAD9Q9H845 621 aa25.68■■□□□ 1.7
IRF3-228ENST00000601291 ABT1Q9ULW3 272 aaKnown RBP25.68■■□□□ 1.7
IRF3-228ENST00000601291 RIPK3Q9Y572 518 aa25.68■■□□□ 1.7
IRF3-228ENST00000601291 A0A1W2PQ27 194 aa25.67■■□□□ 1.7
IRF3-228ENST00000601291 A0A1W2PQ64 194 aa25.67■■□□□ 1.7
IRF3-228ENST00000601291 A0A1W2PQD8 194 aa25.67■■□□□ 1.7
IRF3-228ENST00000601291 TMEM88BA6NKF7 163 aa25.67■■□□□ 1.7
IRF3-228ENST00000601291 LAD1O00515 517 aa25.67■■□□□ 1.7
IRF3-228ENST00000601291 CUTAO60888 179 aa25.67■■□□□ 1.7
IRF3-228ENST00000601291 GCFC2P16383 781 aaKnown RBP25.67■■□□□ 1.7
IRF3-228ENST00000601291 SREBF1P36956 1147 aa25.67■■□□□ 1.7
IRF3-228ENST00000601291 USP11P51784 963 aa25.67■■□□□ 1.7
IRF3-228ENST00000601291 PAGR1Q9BTK6 254 aa25.67■■□□□ 1.7
IRF3-228ENST00000601291 BTBD7Q9P203 1132 aa25.67■■□□□ 1.7
IRF3-228ENST00000601291 NEMFO60524 1076 aa25.66■■□□□ 1.7
IRF3-228ENST00000601291 PPP4R3AQ6IN85 833 aa25.66■■□□□ 1.7
IRF3-228ENST00000601291 RNF207Q6ZRF8 634 aa25.66■■□□□ 1.7
IRF3-228ENST00000601291 RIOX2Q8IUF8 465 aa25.66■■□□□ 1.7
IRF3-228ENST00000601291 CHST13Q8NET6 341 aa25.66■■□□□ 1.7
IRF3-228ENST00000601291 SMCR8Q8TEV9 937 aaPredicted RBP25.66■■□□□ 1.7
IRF3-228ENST00000601291 FERMT2Q96AC1 680 aa25.66■■□□□ 1.7
IRF3-228ENST00000601291 FBXO2Q9UK22 296 aaPredicted RBP25.66■■□□□ 1.7
IRF3-228ENST00000601291 RABGAP1Q9Y3P9 1069 aa25.66■■□□□ 1.7
IRF3-228ENST00000601291 SRPRBQ9Y5M8 271 aaKnown RBP25.66■■□□□ 1.7
IRF3-228ENST00000601291 MANSC4A6NHS7 340 aaPredicted RBP25.65■■□□□ 1.7
IRF3-228ENST00000601291 SLC10A3P09131 477 aa25.65■■□□□ 1.7
IRF3-228ENST00000601291 PTPREP23469 700 aa25.65■■□□□ 1.7
IRF3-228ENST00000601291 ARHGAP4P98171 946 aa25.65■■□□□ 1.7
IRF3-228ENST00000601291 ARL6IP4Q66PJ3 421 aaKnown RBP25.65■■□□□ 1.7
IRF3-228ENST00000601291 NSMFQ6X4W1 530 aa25.65■■□□□ 1.7
IRF3-228ENST00000601291 SPATC1LQ9H0A9 340 aa25.65■■□□□ 1.7
IRF3-228ENST00000601291 FBXO40Q9UH90 709 aa25.65■■□□□ 1.7
IRF3-228ENST00000601291 COPB2P35606 906 aa25.65■■□□□ 1.7
IRF3-228ENST00000601291 AXDND1Q5T1B0 1012 aaPredicted RBP25.65■■□□□ 1.7
IRF3-228ENST00000601291 MOXD1Q6UVY6 613 aa25.65■■□□□ 1.7
IRF3-228ENST00000601291 CCAR1Q8IX12 1150 aaKnown RBP25.65■■□□□ 1.7
IRF3-228ENST00000601291 MRPS27Q92552 414 aaKnown RBP25.65■■□□□ 1.7
IRF3-228ENST00000601291 HHIPL1Q96JK4 782 aa25.65■■□□□ 1.7
IRF3-228ENST00000601291 SMCHD1A6NHR9 2005 aa25.64■■□□□ 1.69
IRF3-228ENST00000601291 TESPA1A2RU30 521 aaPredicted RBP25.64■■□□□ 1.69
IRF3-228ENST00000601291 POTEEQ6S8J3 1075 aa25.64■■□□□ 1.69
IRF3-228ENST00000601291 CCDC73Q6ZRK6 1079 aa25.64■■□□□ 1.69
IRF3-228ENST00000601291 CCDC102AQ96A19 550 aa25.64■■□□□ 1.69
IRF3-228ENST00000601291 PARK7Q99497 189 aaKnown RBP25.64■■□□□ 1.69
IRF3-228ENST00000601291 CNMDO75829 334 aa25.63■■□□□ 1.69
IRF3-228ENST00000601291 TDP2O95551 362 aa25.63■■□□□ 1.69
IRF3-228ENST00000601291 SLC25A27O95847 323 aa25.63■■□□□ 1.69
IRF3-228ENST00000601291 CYP2C8P10632 490 aa25.63■■□□□ 1.69
IRF3-228ENST00000601291 RPS6P62753 249 aaKnown RBP25.63■■□□□ 1.69
IRF3-228ENST00000601291 C4orf32Q8N8J7 132 aa25.63■■□□□ 1.69
IRF3-228ENST00000601291 ZNF784Q8NCA9 323 aaPredicted RBP25.63■■□□□ 1.69
IRF3-228ENST00000601291 SYTL5Q8TDW5 730 aaPredicted RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms