RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 ERVK-21P61565 698 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 IFIT5Q13325 482 aaKnown RBP6.08□□□□□ -1.44
PAF1-208ENST00000598594 KLF1Q13351 362 aaPredicted RBP6.08□□□□□ -1.44
PAF1-208ENST00000598594 SKOR2Q2VWA4 1001 aaPredicted RBP6.08□□□□□ -1.44
PAF1-208ENST00000598594 PARP10Q53GL7 1025 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 ISM2Q6H9L7 571 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 PGM2L1Q6PCE3 622 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 CCDC149Q6ZUS6 474 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 ENOSF1Q7L5Y1 443 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 CATSPER4Q7RTX7 472 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 BRAPQ7Z569 592 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 FGD2Q7Z6J4 655 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 MAP4K3Q8IVH8 894 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 NRSN1Q8IZ57 195 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 C1orf127Q8N9H9 656 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 ZSCAN1Q8NBB4 408 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 MSANTD4Q8NCY6 345 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 C1orf162Q8NEQ5 155 aaPredicted RBP6.08□□□□□ -1.44
PAF1-208ENST00000598594 SLC7A14Q8TBB6 771 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 ZDHHC1Q8WTX9 485 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 FERMT2Q96AC1 680 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 RIPOR3Q96MK2 946 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 FAM193BQ96PV7 902 aaPredicted RBP6.08□□□□□ -1.44
PAF1-208ENST00000598594 KCTD15Q96SI1 283 aaPredicted RBP6.08□□□□□ -1.44
PAF1-208ENST00000598594 CEP44Q9C0F1 390 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 RNF38Q9H0F5 515 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 SMOC1Q9H4F8 434 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 ANTXR1Q9H6X2 564 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 BRD9Q9H8M2 597 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 VTA1Q9NP79 307 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 DZANK1Q9NVP4 752 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 ZNF112Q9UJU3 913 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 MKL2Q9ULH7 1088 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 PCDHB10Q9UN67 800 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 SMC3Q9UQE7 1217 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 USP20Q9Y2K6 914 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 PCDHB14Q9Y5E9 798 aa6.08□□□□□ -1.44
PAF1-208ENST00000598594 RASA4BC9J798 803 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 IPO5O00410 1097 aaKnown RBP6.07□□□□□ -1.44
PAF1-208ENST00000598594 RASA4O43374 803 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 GDF9O60383 454 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 RPL17P18621 184 aaKnown RBP6.07□□□□□ -1.44
PAF1-208ENST00000598594 MUTP22033 750 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 POLR2BP30876 1174 aaKnown RBP6.07□□□□□ -1.44
PAF1-208ENST00000598594 PPM1AP35813 382 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 STAT1P42224 750 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 RPS26P62854 115 aaKnown RBP6.07□□□□□ -1.44
PAF1-208ENST00000598594 HMGN5P82970 282 aaKnown RBP6.07□□□□□ -1.44
PAF1-208ENST00000598594 HTRA3P83110 453 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 ZNF267Q14586 743 aaPredicted RBP6.07□□□□□ -1.44
PAF1-208ENST00000598594 SLMAPQ14BN4 828 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 PPP2R5BQ15173 497 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 CCDC38Q502W7 563 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 TRIM61Q5EBN2 209 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 RRP12Q5JTH9 1297 aaKnown RBP6.07□□□□□ -1.44
PAF1-208ENST00000598594 CFAP58Q5T655 872 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 KIAA1211LQ6NV74 962 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 UNC5DQ6UXZ4 953 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 SYDE1Q6ZW31 735 aaPredicted RBP6.07□□□□□ -1.44
PAF1-208ENST00000598594 CYP2U1Q7Z449 544 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 CARNMT1Q8N4J0 409 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 SLC30A5Q8TAD4 765 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 MGARPQ8TDB4 240 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 USP13Q92995 863 aaPredicted RBP6.07□□□□□ -1.44
PAF1-208ENST00000598594 L3MBTL2Q969R5 705 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 TM9SF2Q99805 663 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 APOL5Q9BWW9 433 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 LSM14BQ9BX40 385 aaKnown RBP6.07□□□□□ -1.44
PAF1-208ENST00000598594 MIR1-1HGQ9H1L0 117 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 FAM204AQ9H8W3 233 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 VPS45Q9NRW7 570 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 ARGLU1Q9NWB6 273 aaPredicted RBP6.07□□□□□ -1.44
PAF1-208ENST00000598594 GPRC5BQ9NZH0 403 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 CCDC39Q9UFE4 941 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 NDOR1Q9UHB4 597 aa6.07□□□□□ -1.44
PAF1-208ENST00000598594 RRP15Q9Y3B9 282 aaKnown RBP6.07□□□□□ -1.44
PAF1-208ENST00000598594 FSD2A1L4K1 749 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 B4E171 279 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 UBAP1LF5GYI3 381 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 EIF3FO00303 357 aaPredicted RBP6.06□□□□□ -1.44
PAF1-208ENST00000598594 RTCAO00442 366 aaKnown RBP6.06□□□□□ -1.44
PAF1-208ENST00000598594 MPHOSPH10O00566 681 aaKnown RBP6.06□□□□□ -1.44
PAF1-208ENST00000598594 KHNYNO15037 678 aaKnown RBP6.06□□□□□ -1.44
PAF1-208ENST00000598594 HTATSF1O43719 755 aaKnown RBP6.06□□□□□ -1.44
PAF1-208ENST00000598594 CILPO75339 1184 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 OFD1O75665 1012 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 DNTTP04053 509 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 AKR1B1P15121 316 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 MX2P20592 715 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 ABCB4P21439 1286 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 GRIK1P39086 918 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 HSD17B7P56937 341 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 SUMO1P63165 101 aaKnown RBP6.06□□□□□ -1.44
PAF1-208ENST00000598594 IRX3P78415 501 aaPredicted RBP6.06□□□□□ -1.44
PAF1-208ENST00000598594 TMF1P82094 1093 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 IFT88Q13099 833 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 HSP90AA2PQ14568 343 aaPredicted RBP6.06□□□□□ -1.44
PAF1-208ENST00000598594 SLC14A2Q15849 920 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 TAF12Q16514 161 aa6.06□□□□□ -1.44
PAF1-208ENST00000598594 SV2CQ496J9 727 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms