RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 RALYLQ86SE5 291 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 NUP133Q8WUM0 1156 aa12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 GLT1D1Q96MS3 346 aa12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 TAAR1Q96RJ0 339 aa12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 RBM8AQ9Y5S9 174 aaKnown RBP12.04□□□□□ -0.48
SHKBP1-210ENST00000595874 CEP290O15078 2479 aa12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 CFBP00751 764 aa12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 RAG1P15918 1043 aa12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 RXRAP19793 462 aa12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 FAAP100Q0VG06 881 aa12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 SNX17Q15036 470 aa12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 SEC23AQ15436 765 aa12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 GPATCH4Q5T3I0 446 aaKnown RBP12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 TICAM2Q86XR7 235 aa12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 OR6J1Q8NGC5 347 aa12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 LRRC2Q9BYS8 371 aa12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 CNNM2Q9H8M5 875 aa12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 JMJD4Q9H9V9 463 aa12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 COL20A1Q9P218 1284 aa12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 U3KPZ7 1027 aaPredicted RBP12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 RAD50Q92878 1312 aa12.03□□□□□ -0.48
SHKBP1-210ENST00000595874 DCDC2CA8MYV0 355 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 KLRF2D3W0D1 207 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 ACRP10323 421 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 EIF2AK2P19525 551 aaKnown RBP12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 ANTXR2P58335 489 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 WTAPQ15007 396 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 FSCN1Q16658 493 aaKnown RBP12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 SLC35G1Q2M3R5 365 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 ASPRV1Q53RT3 343 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 CCDC178Q5BJE1 867 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 TMEM67Q5HYA8 995 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 SEPT14Q6ZU15 432 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 FBXO11Q86XK2 927 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 DEFB123Q8N688 67 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 PIGSQ96S52 555 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 TSEN34Q9BSV6 310 aaKnown RBP12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 WDR11Q9BZH6 1224 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 UPF3AQ9H1J1 476 aaKnown RBP12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 ANO2Q9NQ90 1003 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 MAD2L2Q9UI95 211 aa12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 GNEQ9Y223 722 aaKnown RBP12.02□□□□□ -0.49
SHKBP1-210ENST00000595874 A0A0U1RQG5 324 aaPredicted RBP12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 A0A1W2PPC1 479 aa12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 ERICH2A1L162 156 aa12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 MOXD2PA6NHM9 499 aa12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 PPP1R11O60927 126 aaPredicted RBP12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 ARIH2O95376 493 aa12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 MYCLP12524 364 aaPredicted RBP12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 HOXA13P31271 388 aaPredicted RBP12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 CYP2C18P33260 490 aa12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 CMTR1Q8N1G2 835 aaKnown RBP12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 PCSK9Q8NBP7 692 aaKnown RBP12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 NCOA7Q8NI08 942 aa12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 TRPV6Q9H1D0 765 aa12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 VTA1Q9NP79 307 aa12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 ADD3Q9UEY8 706 aaKnown RBP12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 ABCB11O95342 1321 aa12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 UMODL1Q5DID0 1318 aa12.01□□□□□ -0.49
SHKBP1-210ENST00000595874 DNAH12Q6ZR08 3092 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 hCG_1642624A0A1W2PR95 340 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 ARVCFO00192 962 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 CST5P28325 142 aaPredicted RBP12□□□□□ -0.49
SHKBP1-210ENST00000595874 CCL23P55773 120 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 FPGSQ05932 587 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 GRM4Q14833 912 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 LY6KQ17RY6 165 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 FAM47CQ5HY64 1035 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 IQSEC1Q6DN90 963 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 NFXL1Q6ZNB6 911 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 FCHSD1Q86WN1 690 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 SYTL5Q8TDW5 730 aaPredicted RBP12□□□□□ -0.49
SHKBP1-210ENST00000595874 ANKS1AQ92625 1134 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 TCEANC2Q96MN5 208 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 ESYT1Q9BSJ8 1104 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 LSG1Q9H089 658 aaKnown RBP12□□□□□ -0.49
SHKBP1-210ENST00000595874 WDR19Q8NEZ3 1342 aa12□□□□□ -0.49
SHKBP1-210ENST00000595874 SLC27A2O14975 620 aa11.99□□□□□ -0.49
SHKBP1-210ENST00000595874 TLR3O15455 904 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-210ENST00000595874 PRC1O43663 620 aa11.99□□□□□ -0.49
SHKBP1-210ENST00000595874 TXNP10599 105 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-210ENST00000595874 ITGA7Q13683 1181 aa11.99□□□□□ -0.49
SHKBP1-210ENST00000595874 PPP2R5BQ15173 497 aa11.99□□□□□ -0.49
SHKBP1-210ENST00000595874 LRIT3Q3SXY7 679 aa11.99□□□□□ -0.49
SHKBP1-210ENST00000595874 ARHGEF16Q5VV41 709 aa11.99□□□□□ -0.49
SHKBP1-210ENST00000595874 CCDC82Q8N4S0 544 aa11.99□□□□□ -0.49
SHKBP1-210ENST00000595874 MAP4K1Q92918 833 aa11.99□□□□□ -0.49
SHKBP1-210ENST00000595874 RNPC3Q96LT9 517 aaKnown RBP11.99□□□□□ -0.49
SHKBP1-210ENST00000595874 GRIN2DO15399 1336 aa11.99□□□□□ -0.49
SHKBP1-210ENST00000595874 GRXCR1A8MXD5 290 aa11.98□□□□□ -0.49
SHKBP1-210ENST00000595874 OPLAHO14841 1288 aa11.98□□□□□ -0.49
SHKBP1-210ENST00000595874 KIAA0355O15063 1070 aa11.98□□□□□ -0.49
SHKBP1-210ENST00000595874 ZEB2O60315 1214 aa11.98□□□□□ -0.49
SHKBP1-210ENST00000595874 B4GALT4O60513 344 aa11.98□□□□□ -0.49
SHKBP1-210ENST00000595874 CYP2C9P11712 490 aa11.98□□□□□ -0.49
SHKBP1-210ENST00000595874 CSF2RAP15509 400 aa11.98□□□□□ -0.49
SHKBP1-210ENST00000595874 CDK7P50613 346 aa11.98□□□□□ -0.49
SHKBP1-210ENST00000595874 DUSP28Q4G0W2 176 aa11.98□□□□□ -0.49
SHKBP1-210ENST00000595874 C1orf53Q5VUE5 145 aa11.98□□□□□ -0.49
SHKBP1-210ENST00000595874 CREB3L3Q68CJ9 461 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms