RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 TYW1BQ6NUM6 668 aa16.75■□□□□ 0.27
CAPN12-202ENST00000593700 FAM173BQ6P4H8 233 aa16.75■□□□□ 0.27
CAPN12-202ENST00000593700 GADL1Q6ZQY3 521 aa16.75■□□□□ 0.27
CAPN12-202ENST00000593700 FASTKD5Q7L8L6 764 aaKnown RBP16.75■□□□□ 0.27
CAPN12-202ENST00000593700 PRRT2Q7Z6L0 340 aaPredicted RBP16.75■□□□□ 0.27
CAPN12-202ENST00000593700 KCNG4Q8TDN1 519 aa16.75■□□□□ 0.27
CAPN12-202ENST00000593700 WBP1LQ9NX94 342 aa16.75■□□□□ 0.27
CAPN12-202ENST00000593700 MRPL11Q9Y3B7 192 aaKnown RBP16.75■□□□□ 0.27
CAPN12-202ENST00000593700 IRF6O14896 467 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 ICAM1P05362 532 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 OAZ1P54368 228 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 AP3B2Q13367 1082 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 NONOQ15233 471 aaKnown RBP eCLIP16.74■□□□□ 0.27
CAPN12-202ENST00000593700 NPY5RQ15761 445 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 ANO1Q5XXA6 986 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 CCDC174Q6PII3 467 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 PIK3AP1Q6ZUJ8 805 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 OXER1Q8TDS5 423 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 SHISA4Q96DD7 197 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 USP28Q96RU2 1077 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 PSTPIP2Q9H939 334 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 EHMT1Q9H9B1 1298 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 FBXO28Q9NVF7 368 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 RTEL1Q9NZ71 1219 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 CCPG1Q9ULG6 757 aa16.74■□□□□ 0.27
CAPN12-202ENST00000593700 PPP1R11O60927 126 aaPredicted RBP16.73■□□□□ 0.27
CAPN12-202ENST00000593700 PRPF40AO75400 957 aaKnown RBP16.73■□□□□ 0.27
CAPN12-202ENST00000593700 NASPP49321 788 aaPredicted RBP16.73■□□□□ 0.27
CAPN12-202ENST00000593700 UBE2HP62256 183 aa16.73■□□□□ 0.27
CAPN12-202ENST00000593700 IRX3P78415 501 aaPredicted RBP16.73■□□□□ 0.27
CAPN12-202ENST00000593700 COG2Q14746 738 aa16.73■□□□□ 0.27
CAPN12-202ENST00000593700 CATSPERGQ6ZRH7 1159 aa16.73■□□□□ 0.27
CAPN12-202ENST00000593700 LEO1Q8WVC0 666 aaPredicted RBP16.73■□□□□ 0.27
CAPN12-202ENST00000593700 TNFRSF25Q93038 417 aa16.73■□□□□ 0.27
CAPN12-202ENST00000593700 MS4A3Q96HJ5 214 aa16.73■□□□□ 0.27
CAPN12-202ENST00000593700 NAP1L4Q99733 375 aaKnown RBP16.73■□□□□ 0.27
CAPN12-202ENST00000593700 SLC38A10Q9HBR0 1119 aa16.73■□□□□ 0.27
CAPN12-202ENST00000593700 HOXC10Q9NYD6 342 aa16.73■□□□□ 0.27
CAPN12-202ENST00000593700 PNMA3Q9UL41 463 aa16.73■□□□□ 0.27
CAPN12-202ENST00000593700 PCDHA6Q9UN73 950 aa16.73■□□□□ 0.27
CAPN12-202ENST00000593700 TRPC6Q9Y210 931 aa16.73■□□□□ 0.27
CAPN12-202ENST00000593700 PCDHA8Q9Y5H6 950 aa16.73■□□□□ 0.27
CAPN12-202ENST00000593700 GJA5P36382 358 aa16.72■□□□□ 0.27
CAPN12-202ENST00000593700 CEBPZQ03701 1054 aaKnown RBP16.72■□□□□ 0.27
CAPN12-202ENST00000593700 ORC2Q13416 577 aaPredicted RBP16.72■□□□□ 0.27
CAPN12-202ENST00000593700 TTC38Q5R3I4 469 aa16.72■□□□□ 0.27
CAPN12-202ENST00000593700 MB21D1Q8N884 522 aa16.72■□□□□ 0.27
CAPN12-202ENST00000593700 GDPD2Q9HCC8 539 aa16.72■□□□□ 0.27
CAPN12-202ENST00000593700 TFIP11Q9UBB9 837 aaKnown RBP16.72■□□□□ 0.27
CAPN12-202ENST00000593700 AGTPBP1Q9UPW5 1226 aa16.72■□□□□ 0.27
CAPN12-202ENST00000593700 CCL15-CCL14A0A0B4J2E2 113 aa16.71■□□□□ 0.27
CAPN12-202ENST00000593700 SPDYE3A6NKU9 549 aa16.71■□□□□ 0.27
CAPN12-202ENST00000593700 M0R2N6 131 aa16.71■□□□□ 0.27
CAPN12-202ENST00000593700 FOSP01100 380 aaPredicted RBP16.71■□□□□ 0.27
CAPN12-202ENST00000593700 OSBPP22059 807 aa16.71■□□□□ 0.27
CAPN12-202ENST00000593700 DGKZQ13574 1117 aa16.71■□□□□ 0.27
CAPN12-202ENST00000593700 CCL15Q16663 113 aa16.71■□□□□ 0.27
CAPN12-202ENST00000593700 MCF2L2Q86YR7 1114 aa16.71■□□□□ 0.27
CAPN12-202ENST00000593700 SAMD3Q8N6K7 520 aa16.71■□□□□ 0.27
CAPN12-202ENST00000593700 GTF3C2Q8WUA4 911 aaPredicted RBP16.71■□□□□ 0.27
CAPN12-202ENST00000593700 ANP32EQ9BTT0 268 aa16.71■□□□□ 0.27
CAPN12-202ENST00000593700 CFHR5Q9BXR6 569 aa16.71■□□□□ 0.27
CAPN12-202ENST00000593700 LMBRD1Q9NUN5 540 aa16.71■□□□□ 0.27
CAPN12-202ENST00000593700 SLC45A1Q9Y2W3 748 aa16.71■□□□□ 0.27
CAPN12-202ENST00000593700 DDX49Q9Y6V7 483 aaKnown RBP16.71■□□□□ 0.27
CAPN12-202ENST00000593700 VWA5AO00534 786 aa16.7■□□□□ 0.26
CAPN12-202ENST00000593700 SPTLC2O15270 562 aa16.7■□□□□ 0.26
CAPN12-202ENST00000593700 PPP6R2O75170 966 aa16.7■□□□□ 0.26
CAPN12-202ENST00000593700 HOXA7P31268 230 aaPredicted RBP16.7■□□□□ 0.26
CAPN12-202ENST00000593700 CTCFP49711 727 aaPredicted RBP16.7■□□□□ 0.26
CAPN12-202ENST00000593700 SNAP25P60880 206 aa16.7■□□□□ 0.26
CAPN12-202ENST00000593700 MKRN3Q13064 507 aaKnown RBP16.7■□□□□ 0.26
CAPN12-202ENST00000593700 TKFCQ3LXA3 575 aa16.7■□□□□ 0.26
CAPN12-202ENST00000593700 NEK8Q86SG6 692 aa16.7■□□□□ 0.26
CAPN12-202ENST00000593700 LINC00301Q8NCQ3 95 aa16.7■□□□□ 0.26
CAPN12-202ENST00000593700 RASGRP4Q8TDF6 673 aa16.7■□□□□ 0.26
CAPN12-202ENST00000593700 SYAP1Q96A49 352 aaPredicted RBP16.7■□□□□ 0.26
CAPN12-202ENST00000593700 ATG4CQ96DT6 458 aa16.7■□□□□ 0.26
CAPN12-202ENST00000593700 CHAMP1Q96JM3 812 aa16.7■□□□□ 0.26
CAPN12-202ENST00000593700 BIN2Q9UBW5 565 aaPredicted RBP16.7■□□□□ 0.26
CAPN12-202ENST00000593700 RCOR1Q9UKL0 485 aa16.7■□□□□ 0.26
CAPN12-202ENST00000593700 MORC2Q9Y6X9 1032 aaPredicted RBP16.7■□□□□ 0.26
CAPN12-202ENST00000593700 PIK3CDO00329 1044 aa16.69■□□□□ 0.26
CAPN12-202ENST00000593700 HSPA1AP0DMV8 641 aaKnown RBP16.69■□□□□ 0.26
CAPN12-202ENST00000593700 HSPA1BP0DMV9 641 aaKnown RBP16.69■□□□□ 0.26
CAPN12-202ENST00000593700 ME1P48163 572 aa16.69■□□□□ 0.26
CAPN12-202ENST00000593700 CLK2P49760 499 aaKnown RBP16.69■□□□□ 0.26
CAPN12-202ENST00000593700 NOM1Q5C9Z4 860 aaKnown RBP16.69■□□□□ 0.26
CAPN12-202ENST00000593700 JAKMIP3Q5VZ66 844 aa16.69■□□□□ 0.26
CAPN12-202ENST00000593700 ANKRD23Q86SG2 305 aa16.69■□□□□ 0.26
CAPN12-202ENST00000593700 CPXCR1Q8N123 301 aa16.69■□□□□ 0.26
CAPN12-202ENST00000593700 MAF1Q9H063 256 aa16.69■□□□□ 0.26
CAPN12-202ENST00000593700 MAP3K20Q9NYL2 800 aaKnown RBP16.69■□□□□ 0.26
CAPN12-202ENST00000593700 CLIC4Q9Y696 253 aa16.69■□□□□ 0.26
CAPN12-202ENST00000593700 SPDYE16A6NNV3 312 aaPredicted RBP16.68■□□□□ 0.26
CAPN12-202ENST00000593700 GCOM1H8Y6P7 765 aaPredicted RBP16.68■□□□□ 0.26
CAPN12-202ENST00000593700 LAD1O00515 517 aa16.68■□□□□ 0.26
CAPN12-202ENST00000593700 ATP2A1O14983 1001 aa16.68■□□□□ 0.26
CAPN12-202ENST00000593700 POLR2MP0CAP2 368 aa16.68■□□□□ 0.26
CAPN12-202ENST00000593700 ALAS1P13196 640 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms